RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 CUL9Q8IWT3 2517 aa24.22■■□□□ 1.47
HMGA2-208ENST00000537429 SCN8AQ9UQD0 1980 aa24.21■■□□□ 1.47
HMGA2-208ENST00000537429 FAM237BA0A1B0GVD1 139 aa24.21■■□□□ 1.47
HMGA2-208ENST00000537429 STX7O15400 261 aaKnown RBP24.21■■□□□ 1.47
HMGA2-208ENST00000537429 GALR2O43603 387 aaPredicted RBP24.21■■□□□ 1.47
HMGA2-208ENST00000537429 TM7SF2O76062 418 aa24.21■■□□□ 1.47
HMGA2-208ENST00000537429 PPP2CBP62714 309 aa24.21■■□□□ 1.47
HMGA2-208ENST00000537429 PPP2CAP67775 309 aa24.21■■□□□ 1.47
HMGA2-208ENST00000537429 ACOX1Q15067 660 aa24.21■■□□□ 1.47
HMGA2-208ENST00000537429 RFLNAQ6ZTI6 216 aa24.21■■□□□ 1.47
HMGA2-208ENST00000537429 CEP128Q6ZU80 1094 aa24.21■■□□□ 1.47
HMGA2-208ENST00000537429 Q6ZVL8 140 aa24.21■■□□□ 1.47
HMGA2-208ENST00000537429 FBXO36Q8NEA4 188 aa24.21■■□□□ 1.47
HMGA2-208ENST00000537429 OR4K2Q8NGD2 314 aa24.21■■□□□ 1.47
HMGA2-208ENST00000537429 OR13C4Q8NGS5 318 aa24.21■■□□□ 1.47
HMGA2-208ENST00000537429 TRIM56Q9BRZ2 755 aaKnown RBP24.21■■□□□ 1.47
HMGA2-208ENST00000537429 C1QTNF2Q9BXJ5 285 aa24.21■■□□□ 1.47
HMGA2-208ENST00000537429 C6orf106Q9H6K1 298 aaPredicted RBP24.21■■□□□ 1.47
HMGA2-208ENST00000537429 BPIFA1Q9NP55 256 aa24.21■■□□□ 1.47
HMGA2-208ENST00000537429 NLE1Q9NVX2 485 aaPredicted RBP24.21■■□□□ 1.47
HMGA2-208ENST00000537429 PKD2L2Q9NZM6 624 aa24.21■■□□□ 1.47
HMGA2-208ENST00000537429 CHMP2BQ9UQN3 213 aa24.21■■□□□ 1.47
HMGA2-208ENST00000537429 COQ6Q9Y2Z9 468 aa24.21■■□□□ 1.47
HMGA2-208ENST00000537429 CCDC78A2IDD5 438 aa24.2■■□□□ 1.47
HMGA2-208ENST00000537429 LZTS3O60299 673 aaPredicted RBP24.2■■□□□ 1.47
HMGA2-208ENST00000537429 RECQL5O94762 991 aaPredicted RBP24.2■■□□□ 1.47
HMGA2-208ENST00000537429 FAM153BP0C7A2 387 aa24.2■■□□□ 1.47
HMGA2-208ENST00000537429 SP9P0CG40 484 aa24.2■■□□□ 1.47
HMGA2-208ENST00000537429 NMBRP28336 390 aa24.2■■□□□ 1.47
HMGA2-208ENST00000537429 ACVR1Q04771 509 aa24.2■■□□□ 1.47
HMGA2-208ENST00000537429 AGERQ15109 404 aa24.2■■□□□ 1.47
HMGA2-208ENST00000537429 SKIDA1Q1XH10 827 aa24.2■■□□□ 1.47
HMGA2-208ENST00000537429 ZNF284Q2VY69 593 aa24.2■■□□□ 1.47
HMGA2-208ENST00000537429 FAM153CQ494X1 144 aa24.2■■□□□ 1.47
HMGA2-208ENST00000537429 ESRP1Q6NXG1 681 aaKnown RBP24.2■■□□□ 1.47
HMGA2-208ENST00000537429 SLC36A4Q6YBV0 504 aa24.2■■□□□ 1.47
HMGA2-208ENST00000537429 CYP2U1Q7Z449 544 aa24.2■■□□□ 1.47
HMGA2-208ENST00000537429 RELL1Q8IUW5 271 aa24.2■■□□□ 1.47
HMGA2-208ENST00000537429 CCNJLQ8IV13 435 aa24.2■■□□□ 1.47
HMGA2-208ENST00000537429 ANKMY2Q8IV38 441 aa24.2■■□□□ 1.47
HMGA2-208ENST00000537429 MFSD3Q96ES6 412 aa24.2■■□□□ 1.47
HMGA2-208ENST00000537429 DNAJC1Q96KC8 554 aaKnown RBP24.2■■□□□ 1.47
HMGA2-208ENST00000537429 TREX1Q9NSU2 369 aa24.2■■□□□ 1.47
HMGA2-208ENST00000537429 SLC2A6Q9UGQ3 507 aa24.2■■□□□ 1.47
HMGA2-208ENST00000537429 TRPM6Q9BX84 2022 aa24.2■■□□□ 1.46
HMGA2-208ENST00000537429 RGSL1A5PLK6 1076 aa24.2■■□□□ 1.46
HMGA2-208ENST00000537429 GOLGA8CPA6NN73 597 aa24.2■■□□□ 1.46
HMGA2-208ENST00000537429 WNT9AO14904 365 aa24.2■■□□□ 1.46
HMGA2-208ENST00000537429 LATO43561 262 aa24.2■■□□□ 1.46
HMGA2-208ENST00000537429 BPIP17213 487 aa24.2■■□□□ 1.46
HMGA2-208ENST00000537429 PGAM1P18669 254 aa24.2■■□□□ 1.46
HMGA2-208ENST00000537429 ETV3P41162 512 aa24.2■■□□□ 1.46
HMGA2-208ENST00000537429 MAGEA4P43358 317 aa24.2■■□□□ 1.46
HMGA2-208ENST00000537429 FGL2Q14314 439 aa24.2■■□□□ 1.46
HMGA2-208ENST00000537429 KIAA0895LQ68EN5 471 aa24.2■■□□□ 1.46
HMGA2-208ENST00000537429 OR13J1Q8NGT2 312 aa24.2■■□□□ 1.46
HMGA2-208ENST00000537429 PYROXD1Q8WU10 500 aa24.2■■□□□ 1.46
HMGA2-208ENST00000537429 DTD2Q96FN9 168 aa24.2■■□□□ 1.46
HMGA2-208ENST00000537429 SLC17A9Q9BYT1 436 aa24.2■■□□□ 1.46
HMGA2-208ENST00000537429 PCED1AQ9H1Q7 454 aa24.2■■□□□ 1.46
HMGA2-208ENST00000537429 RPP40O75818 363 aaKnown RBP24.19■■□□□ 1.46
HMGA2-208ENST00000537429 USP1O94782 785 aa24.19■■□□□ 1.46
HMGA2-208ENST00000537429 BCKDHBP21953 392 aa24.19■■□□□ 1.46
HMGA2-208ENST00000537429 HADHAP40939 763 aa24.19■■□□□ 1.46
HMGA2-208ENST00000537429 CCR5P51681 352 aa24.19■■□□□ 1.46
HMGA2-208ENST00000537429 RPL6Q02878 288 aaKnown RBP24.19■■□□□ 1.46
HMGA2-208ENST00000537429 ANKRD20A4Q4UJ75 823 aa24.19■■□□□ 1.46
HMGA2-208ENST00000537429 CES3Q6UWW8 571 aa24.19■■□□□ 1.46
HMGA2-208ENST00000537429 NRSN1Q8IZ57 195 aa24.19■■□□□ 1.46
HMGA2-208ENST00000537429 GPR26Q8NDV2 337 aa24.19■■□□□ 1.46
HMGA2-208ENST00000537429 CADM4Q8NFZ8 388 aa24.19■■□□□ 1.46
HMGA2-208ENST00000537429 ASB12Q8WXK4 309 aa24.19■■□□□ 1.46
HMGA2-208ENST00000537429 CDKN2AIPNLQ96HQ2 116 aa24.19■■□□□ 1.46
HMGA2-208ENST00000537429 FCRL3Q96P31 734 aaPredicted RBP24.19■■□□□ 1.46
HMGA2-208ENST00000537429 PLAC1Q9HBJ0 212 aa24.19■■□□□ 1.46
HMGA2-208ENST00000537429 NFKBIL1Q9UBC1 381 aaPredicted RBP24.19■■□□□ 1.46
HMGA2-208ENST00000537429 ZC3H7BQ9UGR2 993 aaKnown RBP24.19■■□□□ 1.46
HMGA2-208ENST00000537429 RPS6KL1Q9Y6S9 549 aa24.19■■□□□ 1.46
HMGA2-208ENST00000537429 H7C0S8 307 aa24.18■■□□□ 1.46
HMGA2-208ENST00000537429 TTC4O95801 387 aa24.18■■□□□ 1.46
HMGA2-208ENST00000537429 PAK4O96013 591 aaPredicted RBP24.18■■□□□ 1.46
HMGA2-208ENST00000537429 IGHV4-34P06331 123 aa24.18■■□□□ 1.46
HMGA2-208ENST00000537429 POLBP06746 335 aa24.18■■□□□ 1.46
HMGA2-208ENST00000537429 MAT2AP31153 395 aaKnown RBP24.18■■□□□ 1.46
HMGA2-208ENST00000537429 DCDC1P59894 354 aa24.18■■□□□ 1.46
HMGA2-208ENST00000537429 TMPRSS15P98073 1019 aa24.18■■□□□ 1.46
HMGA2-208ENST00000537429 ZDHHC20Q5W0Z9 365 aa24.18■■□□□ 1.46
HMGA2-208ENST00000537429 GAB3Q8WWW8 586 aa24.18■■□□□ 1.46
HMGA2-208ENST00000537429 KLK6Q92876 244 aa24.18■■□□□ 1.46
HMGA2-208ENST00000537429 BIRC7Q96CA5 298 aa24.18■■□□□ 1.46
HMGA2-208ENST00000537429 C9orf72Q96LT7 481 aa24.18■■□□□ 1.46
HMGA2-208ENST00000537429 PLEKHG4BQ96PX9 1271 aa24.18■■□□□ 1.46
HMGA2-208ENST00000537429 ZSCAN32Q9NX65 697 aa24.18■■□□□ 1.46
HMGA2-208ENST00000537429 KCTD5Q9NXV2 234 aa24.18■■□□□ 1.46
HMGA2-208ENST00000537429 CD84Q9UIB8 345 aa24.18■■□□□ 1.46
HMGA2-208ENST00000537429 WDFY4Q6ZS81 3184 aa24.18■■□□□ 1.46
HMGA2-208ENST00000537429 ZCWPW2A0A1B0GU75 182 aa24.17■■□□□ 1.46
HMGA2-208ENST00000537429 FSBPO95073 299 aa24.17■■□□□ 1.46
HMGA2-208ENST00000537429 ARSDP51689 593 aa24.17■■□□□ 1.46
HMGA2-208ENST00000537429 SRSF5Q13243 272 aaKnown RBP24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms