RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 PECAM1P16284 738 aaPredicted RBP17.18■□□□□ 0.34
SFSWAP-205ENST00000537164 PTPN7P35236 360 aa17.18■□□□□ 0.34
SFSWAP-205ENST00000537164 STC1P52823 247 aa17.18■□□□□ 0.34
SFSWAP-205ENST00000537164 EPHB1P54762 984 aa17.18■□□□□ 0.34
SFSWAP-205ENST00000537164 C1orf61Q13536 156 aa17.18■□□□□ 0.34
SFSWAP-205ENST00000537164 CDKN3Q16667 212 aa17.18■□□□□ 0.34
SFSWAP-205ENST00000537164 DEFB133Q30KQ1 61 aa17.18■□□□□ 0.34
SFSWAP-205ENST00000537164 CCDC157Q569K6 752 aa17.18■□□□□ 0.34
SFSWAP-205ENST00000537164 KCTD16Q68DU8 428 aa17.18■□□□□ 0.34
SFSWAP-205ENST00000537164 BBS12Q6ZW61 710 aa17.18■□□□□ 0.34
SFSWAP-205ENST00000537164 NT5DC3Q86UY8 548 aa17.18■□□□□ 0.34
SFSWAP-205ENST00000537164 HID1Q8IV36 788 aa17.18■□□□□ 0.34
SFSWAP-205ENST00000537164 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.18■□□□□ 0.34
SFSWAP-205ENST00000537164 ACRBPQ8NEB7 543 aa17.18■□□□□ 0.34
SFSWAP-205ENST00000537164 KIAA1524Q8TCG1 905 aa17.18■□□□□ 0.34
SFSWAP-205ENST00000537164 TFB1MQ8WVM0 346 aaKnown RBP17.18■□□□□ 0.34
SFSWAP-205ENST00000537164 P3H4Q92791 437 aa17.18■□□□□ 0.34
SFSWAP-205ENST00000537164 PDXPQ96GD0 296 aa17.18■□□□□ 0.34
SFSWAP-205ENST00000537164 TEKT5Q96M29 485 aa17.18■□□□□ 0.34
SFSWAP-205ENST00000537164 SMIM14Q96QK8 99 aa17.18■□□□□ 0.34
SFSWAP-205ENST00000537164 FGF22Q9HCT0 170 aa17.18■□□□□ 0.34
SFSWAP-205ENST00000537164 CELSR3Q9NYQ7 3312 aa17.18■□□□□ 0.34
SFSWAP-205ENST00000537164 CCDC66A2RUB6 948 aa17.17■□□□□ 0.34
SFSWAP-205ENST00000537164 MTSS1O43312 755 aa17.17■□□□□ 0.34
SFSWAP-205ENST00000537164 SOD1P00441 154 aa17.17■□□□□ 0.34
SFSWAP-205ENST00000537164 TNFP01375 233 aa17.17■□□□□ 0.34
SFSWAP-205ENST00000537164 ANXA6P08133 673 aa17.17■□□□□ 0.34
SFSWAP-205ENST00000537164 PTPN3P26045 913 aa17.17■□□□□ 0.34
SFSWAP-205ENST00000537164 CTNNA2P26232 953 aa17.17■□□□□ 0.34
SFSWAP-205ENST00000537164 RP1P56715 2156 aa17.17■□□□□ 0.34
SFSWAP-205ENST00000537164 INSM1Q01101 510 aaPredicted RBP17.17■□□□□ 0.34
SFSWAP-205ENST00000537164 WASHC5Q12768 1159 aa17.17■□□□□ 0.34
SFSWAP-205ENST00000537164 QPCTQ16769 361 aa17.17■□□□□ 0.34
SFSWAP-205ENST00000537164 HES3Q5TGS1 186 aa17.17■□□□□ 0.34
SFSWAP-205ENST00000537164 KAZNQ674X7 775 aa17.17■□□□□ 0.34
SFSWAP-205ENST00000537164 NYAP1Q6ZVC0 841 aa17.17■□□□□ 0.34
SFSWAP-205ENST00000537164 NRSN1Q8IZ57 195 aa17.17■□□□□ 0.34
SFSWAP-205ENST00000537164 PDCD7Q8N8D1 485 aaKnown RBP17.17■□□□□ 0.34
SFSWAP-205ENST00000537164 DCBLD1Q8N8Z6 715 aa17.17■□□□□ 0.34
SFSWAP-205ENST00000537164 NBEAQ8NFP9 2946 aa17.17■□□□□ 0.34
SFSWAP-205ENST00000537164 OR1E3Q8WZA6 343 aa17.17■□□□□ 0.34
SFSWAP-205ENST00000537164 AGAP3Q96P47 875 aa17.17■□□□□ 0.34
SFSWAP-205ENST00000537164 ADGRE3Q9BY15 652 aa17.17■□□□□ 0.34
SFSWAP-205ENST00000537164 CEP41Q9BYV8 373 aa17.17■□□□□ 0.34
SFSWAP-205ENST00000537164 PHPT1Q9NRX4 125 aaPredicted RBP17.17■□□□□ 0.34
SFSWAP-205ENST00000537164 A0A0U1RQS6 177 aa17.16■□□□□ 0.34
SFSWAP-205ENST00000537164 FAM149AA5PLN7 773 aa17.16■□□□□ 0.34
SFSWAP-205ENST00000537164 HACD1B0YJ81 288 aa17.16■□□□□ 0.34
SFSWAP-205ENST00000537164 APOC4-APOC2K7ER74 178 aa17.16■□□□□ 0.34
SFSWAP-205ENST00000537164 APOC2P02655 101 aa17.16■□□□□ 0.34
SFSWAP-205ENST00000537164 PYGLP06737 847 aa17.16■□□□□ 0.34
SFSWAP-205ENST00000537164 CELA2BP08218 269 aaPredicted RBP17.16■□□□□ 0.34
SFSWAP-205ENST00000537164 CTSEP14091 401 aa17.16■□□□□ 0.34
SFSWAP-205ENST00000537164 JUPP14923 745 aa17.16■□□□□ 0.34
SFSWAP-205ENST00000537164 CDK3Q00526 305 aa17.16■□□□□ 0.34
SFSWAP-205ENST00000537164 XRCC4Q13426 336 aa17.16■□□□□ 0.34
SFSWAP-205ENST00000537164 CDCP2Q5VXM1 449 aa17.16■□□□□ 0.34
SFSWAP-205ENST00000537164 DENND2CQ68D51 928 aa17.16■□□□□ 0.34
SFSWAP-205ENST00000537164 ADAMTSL4Q6UY14 1074 aa17.16■□□□□ 0.34
SFSWAP-205ENST00000537164 HEATR4Q86WZ0 1026 aa17.16■□□□□ 0.34
SFSWAP-205ENST00000537164 GKN2Q86XP6 184 aa17.16■□□□□ 0.34
SFSWAP-205ENST00000537164 CCDC50Q8IVM0 306 aa17.16■□□□□ 0.34
SFSWAP-205ENST00000537164 SLC35F3Q8IY50 421 aa17.16■□□□□ 0.34
SFSWAP-205ENST00000537164 TXLNBQ8N3L3 684 aa17.16■□□□□ 0.34
SFSWAP-205ENST00000537164 LPCAT1Q8NF37 534 aa17.16■□□□□ 0.34
SFSWAP-205ENST00000537164 GLMNQ92990 594 aa17.16■□□□□ 0.34
SFSWAP-205ENST00000537164 VAT1Q99536 393 aa17.16■□□□□ 0.34
SFSWAP-205ENST00000537164 MLPHQ9BV36 600 aaPredicted RBP17.16■□□□□ 0.34
SFSWAP-205ENST00000537164 FRMD8Q9BZ67 464 aaPredicted RBP17.16■□□□□ 0.34
SFSWAP-205ENST00000537164 ABCG8Q9H221 673 aa17.16■□□□□ 0.34
SFSWAP-205ENST00000537164 GLOD4Q9HC38 313 aa17.16■□□□□ 0.34
SFSWAP-205ENST00000537164 ZMIZ1Q9ULJ6 1067 aa17.16■□□□□ 0.34
SFSWAP-205ENST00000537164 ACACAQ13085 2346 aa17.16■□□□□ 0.34
SFSWAP-205ENST00000537164 ZFHX4Q86UP3 3567 aa17.16■□□□□ 0.34
SFSWAP-205ENST00000537164 ARHGEF17Q96PE2 2063 aaPredicted RBP17.16■□□□□ 0.34
SFSWAP-205ENST00000537164 APC2O95996 2303 aa17.15■□□□□ 0.34
SFSWAP-205ENST00000537164 PRSS38A1L453 326 aa17.15■□□□□ 0.34
SFSWAP-205ENST00000537164 GRID2IPA4D2P6 1211 aa17.15■□□□□ 0.34
SFSWAP-205ENST00000537164 RGSL1A5PLK6 1076 aa17.15■□□□□ 0.34
SFSWAP-205ENST00000537164 TRABD2BA6NFA1 517 aa17.15■□□□□ 0.34
SFSWAP-205ENST00000537164 OPA1O60313 960 aa17.15■□□□□ 0.34
SFSWAP-205ENST00000537164 CLDN7O95471 211 aa17.15■□□□□ 0.34
SFSWAP-205ENST00000537164 CEACAM5P06731 702 aa17.15■□□□□ 0.34
SFSWAP-205ENST00000537164 MYF5P13349 255 aa17.15■□□□□ 0.34
SFSWAP-205ENST00000537164 CD68P34810 354 aaPredicted RBP17.15■□□□□ 0.34
SFSWAP-205ENST00000537164 RPIAP49247 311 aa17.15■□□□□ 0.34
SFSWAP-205ENST00000537164 LLGL1Q15334 1064 aa17.15■□□□□ 0.34
SFSWAP-205ENST00000537164 NR0B2Q15466 257 aa17.15■□□□□ 0.34
SFSWAP-205ENST00000537164 RFLNAQ6ZTI6 216 aa17.15■□□□□ 0.34
SFSWAP-205ENST00000537164 MARCH9Q86YJ5 346 aa17.15■□□□□ 0.34
SFSWAP-205ENST00000537164 SPC24Q8NBT2 197 aa17.15■□□□□ 0.34
SFSWAP-205ENST00000537164 IFI44Q8TCB0 444 aa17.15■□□□□ 0.34
SFSWAP-205ENST00000537164 SCG3Q8WXD2 468 aaKnown RBP17.15■□□□□ 0.34
SFSWAP-205ENST00000537164 ZCCHC14Q8WYQ9 949 aaKnown RBP17.15■□□□□ 0.34
SFSWAP-205ENST00000537164 AP2M1Q96CW1 435 aa17.15■□□□□ 0.34
SFSWAP-205ENST00000537164 SCARF2Q96GP6 870 aaPredicted RBP17.15■□□□□ 0.34
SFSWAP-205ENST00000537164 QKIQ96PU8 341 aaKnown RBP eCLIP17.15■□□□□ 0.34
SFSWAP-205ENST00000537164 MRPL40Q9NQ50 206 aaKnown RBP17.15■□□□□ 0.34
SFSWAP-205ENST00000537164 SEPT10Q9P0V9 454 aa17.15■□□□□ 0.34
SFSWAP-205ENST00000537164 CLCA2Q9UQC9 943 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms