RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 SOWAHCQ53LP3 525 aaPredicted RBP3.73□□□□□ -1.81
MCF2-210ENST00000536274 ARSKQ6UWY0 536 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 LIAT1Q6ZQX7 453 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 OTOP1Q7RTM1 612 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 FAM35AQ86V20 835 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 TBC1D21Q8IYX1 336 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 TAS1R2Q8TE23 839 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 FKBP10Q96AY3 582 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 TESCQ96BS2 214 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 CMTM5Q96DZ9 223 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 MCRS1Q96EZ8 462 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 NLRP4Q96MN2 994 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 GAD1Q99259 594 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 SORT1Q99523 831 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 COPS4Q9BT78 406 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 BDH2Q9BUT1 245 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 ZC3H12CQ9C0D7 883 aaKnown RBP3.73□□□□□ -1.81
MCF2-210ENST00000536274 C6orf62Q9GZU0 229 aaPredicted RBP3.73□□□□□ -1.81
MCF2-210ENST00000536274 ACSS3Q9H6R3 686 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 GREM2Q9H772 168 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 LRRC40Q9H9A6 602 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 ARNT2Q9HBZ2 717 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 ERVK13-1Q9NX77 482 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 FBXL12Q9NXK8 326 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 LRP2BPQ9P2M1 347 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 PRKAG2Q9UGJ0 569 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 LRFN2Q9ULH4 789 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 VWA7Q9Y334 891 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 ROBO3Q96MS0 1386 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 PIPSLA2A3N6 862 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 HMX2A2RU54 273 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 OR6C70A6NIJ9 312 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 C9IYK1 514 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 E5RI56 91 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 H3BRB1 525 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 EML1O00423 815 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 ZNF195O14628 629 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 GREM1O60565 184 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 CLASP2O75122 1294 aaKnown RBP3.73□□□□□ -1.81
MCF2-210ENST00000536274 SNNO75324 88 aaPredicted RBP3.73□□□□□ -1.81
MCF2-210ENST00000536274 PRKD3O94806 890 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 TRIM16O95361 564 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 GGPS1O95749 300 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 GSRP00390 522 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 PDGFAP04085 211 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 CYBBP04839 570 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 BPGMP07738 259 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 RD3LP0DJH9 198 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 FGF3P11487 239 aaPredicted RBP3.73□□□□□ -1.81
MCF2-210ENST00000536274 BTF3P20290 206 aaKnown RBP3.73□□□□□ -1.81
MCF2-210ENST00000536274 POU1F1P28069 291 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 OXTRP30559 389 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 KCNC1P48547 511 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 TNNI2P48788 182 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 NPY2RP49146 381 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 ST13P50502 369 aaKnown RBP3.73□□□□□ -1.81
MCF2-210ENST00000536274 ADCY7P51828 1080 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 GTF2A2P52657 109 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 SLC12A2P55011 1212 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 NME5P56597 212 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 ABRQ12979 859 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 ACOX1Q15067 660 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 MEP1AQ16819 746 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 SMTNL2Q2TAL5 461 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 SPDYE7PQ495Y7 208 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 BCL7AQ4VC05 210 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 FSCBQ5H9T9 825 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 KRT79Q5XKE5 535 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 GTF2IRD2BQ6EKJ0 949 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 ALG1LQ6GMV1 187 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 LRRC8EQ6NSJ5 796 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 MFSD7Q6UXD7 560 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 UNC5DQ6UXZ4 953 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 NAPRTQ6XQN6 538 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 DPY19L3Q6ZPD9 716 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 ANKS3Q6ZW76 656 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 CATSPER4Q7RTX7 472 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 R3HCC1LQ7Z5L2 792 aaKnown RBP3.73□□□□□ -1.81
MCF2-210ENST00000536274 ADAMTSL2Q86TH1 951 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 RBM23Q86U06 439 aaKnown RBP3.73□□□□□ -1.81
MCF2-210ENST00000536274 GTF2IRD2Q86UP8 949 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 FAM83AQ86UY5 434 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 GLCCI1Q86VQ1 547 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 KYQ8NBH2 561 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 SLC44A5Q8NCS7 719 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 ZNF420Q8TAQ5 688 aaPredicted RBP3.73□□□□□ -1.81
MCF2-210ENST00000536274 SLC5A11Q8WWX8 675 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 CPT1BQ92523 772 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 NXNL1Q96CM4 212 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 NAT9Q9BTE0 207 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 FOXP3Q9BZS1 431 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 ACTR6Q9GZN1 396 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 RSPH9Q9H1X1 276 aaPredicted RBP3.73□□□□□ -1.81
MCF2-210ENST00000536274 KCNN2Q9H2S1 579 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 IFT22Q9H7X7 185 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 TRMT13Q9NUP7 481 aaKnown RBP3.73□□□□□ -1.81
MCF2-210ENST00000536274 CUEDC1Q9NWM3 386 aaPredicted RBP3.73□□□□□ -1.81
MCF2-210ENST00000536274 KCND2Q9NZV8 630 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 SIRPGQ9P1W8 387 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 MAP10Q9P2G4 905 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms