RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 IQCHQ86VS3 1027 aa12.05□□□□□ -0.48
CHD4-203ENST00000535717 PELI3Q8N2H9 469 aa12.05□□□□□ -0.48
CHD4-203ENST00000535717 TTC30BQ8N4P2 665 aa12.05□□□□□ -0.48
CHD4-203ENST00000535717 PLA2G15Q8NCC3 412 aa12.05□□□□□ -0.48
CHD4-203ENST00000535717 SPATA4Q8NEY3 305 aa12.05□□□□□ -0.48
CHD4-203ENST00000535717 OR13H1Q8NG92 308 aa12.05□□□□□ -0.48
CHD4-203ENST00000535717 CCHCR1Q8TD31 782 aa12.05□□□□□ -0.48
CHD4-203ENST00000535717 BLOC1S5Q8TDH9 187 aa12.05□□□□□ -0.48
CHD4-203ENST00000535717 LRRC45Q96CN5 670 aa12.05□□□□□ -0.48
CHD4-203ENST00000535717 NUS1Q96E22 293 aa12.05□□□□□ -0.48
CHD4-203ENST00000535717 KLHDC7BQ96G42 594 aa12.05□□□□□ -0.48
CHD4-203ENST00000535717 NUSAP1Q9BXS6 441 aaKnown RBP12.05□□□□□ -0.48
CHD4-203ENST00000535717 GPR63Q9BZJ6 419 aa12.05□□□□□ -0.48
CHD4-203ENST00000535717 ABCG8Q9H221 673 aa12.05□□□□□ -0.48
CHD4-203ENST00000535717 HACD3Q9P035 362 aa12.05□□□□□ -0.48
CHD4-203ENST00000535717 CD84Q9UIB8 345 aa12.05□□□□□ -0.48
CHD4-203ENST00000535717 CDC23Q9UJX2 597 aa12.05□□□□□ -0.48
CHD4-203ENST00000535717 ANKRD6Q9Y2G4 727 aa12.05□□□□□ -0.48
CHD4-203ENST00000535717 CFAP54Q96N23 3096 aa12.04□□□□□ -0.48
CHD4-203ENST00000535717 LNP1A1A4G5 178 aa12.04□□□□□ -0.48
CHD4-203ENST00000535717 A6NNZ2 444 aa12.04□□□□□ -0.48
CHD4-203ENST00000535717 K7ESM1 405 aa12.04□□□□□ -0.48
CHD4-203ENST00000535717 ARHGAP33O14559 1287 aa12.04□□□□□ -0.48
CHD4-203ENST00000535717 SLC4A1P02730 911 aa12.04□□□□□ -0.48
CHD4-203ENST00000535717 PCCBP05166 539 aa12.04□□□□□ -0.48
CHD4-203ENST00000535717 THEGLP0DJG4 465 aa12.04□□□□□ -0.48
CHD4-203ENST00000535717 TPH1P17752 444 aa12.04□□□□□ -0.48
CHD4-203ENST00000535717 ENGP17813 658 aa12.04□□□□□ -0.48
CHD4-203ENST00000535717 GRIA1P42261 906 aa12.04□□□□□ -0.48
CHD4-203ENST00000535717 CTSKP43235 329 aa12.04□□□□□ -0.48
CHD4-203ENST00000535717 SPINT3P49223 89 aa12.04□□□□□ -0.48
CHD4-203ENST00000535717 C21orf59P57076 290 aa12.04□□□□□ -0.48
CHD4-203ENST00000535717 NXPH1P58417 271 aa12.04□□□□□ -0.48
CHD4-203ENST00000535717 PFN3P60673 137 aa12.04□□□□□ -0.48
CHD4-203ENST00000535717 BASP1P80723 227 aaKnown RBP12.04□□□□□ -0.48
CHD4-203ENST00000535717 OVGP1Q12889 678 aa12.04□□□□□ -0.48
CHD4-203ENST00000535717 GRIK2Q13002 908 aa12.04□□□□□ -0.48
CHD4-203ENST00000535717 INPP5AQ14642 412 aa12.04□□□□□ -0.48
CHD4-203ENST00000535717 PPP1R7Q15435 360 aa12.04□□□□□ -0.48
CHD4-203ENST00000535717 PNCKQ6P2M8 343 aa12.04□□□□□ -0.48
CHD4-203ENST00000535717 KYAT3Q6YP21 454 aaKnown RBP12.04□□□□□ -0.48
CHD4-203ENST00000535717 PRR23CQ6ZRP0 262 aa12.04□□□□□ -0.48
CHD4-203ENST00000535717 ZNF765Q7L2R6 523 aa12.04□□□□□ -0.48
CHD4-203ENST00000535717 ZNF572Q7Z3I7 529 aaPredicted RBP12.04□□□□□ -0.48
CHD4-203ENST00000535717 PTAR1Q7Z6K3 402 aaPredicted RBP12.04□□□□□ -0.48
CHD4-203ENST00000535717 LINC00523Q86TU6 105 aa12.04□□□□□ -0.48
CHD4-203ENST00000535717 SPATS2Q86XZ4 545 aaKnown RBP12.04□□□□□ -0.48
CHD4-203ENST00000535717 RAVER1Q8IY67 606 aaKnown RBP12.04□□□□□ -0.48
CHD4-203ENST00000535717 NRSN1Q8IZ57 195 aa12.04□□□□□ -0.48
CHD4-203ENST00000535717 SLC22A18ASQ8N1D0 253 aa12.04□□□□□ -0.48
CHD4-203ENST00000535717 OR52K1Q8NGK4 314 aa12.04□□□□□ -0.48
CHD4-203ENST00000535717 SCAMP4Q969E2 229 aa12.04□□□□□ -0.48
CHD4-203ENST00000535717 KRT12Q99456 494 aa12.04□□□□□ -0.48
CHD4-203ENST00000535717 TRABDQ9H4I3 376 aa12.04□□□□□ -0.48
CHD4-203ENST00000535717 EIF2B3Q9NR50 452 aaKnown RBP12.04□□□□□ -0.48
CHD4-203ENST00000535717 GPR27Q9NS67 375 aa12.04□□□□□ -0.48
CHD4-203ENST00000535717 RXFP3Q9NSD7 469 aa12.04□□□□□ -0.48
CHD4-203ENST00000535717 PIH1D1Q9NWS0 290 aaKnown RBP12.04□□□□□ -0.48
CHD4-203ENST00000535717 KCTD5Q9NXV2 234 aa12.04□□□□□ -0.48
CHD4-203ENST00000535717 SNX11Q9Y5W9 270 aa12.04□□□□□ -0.48
CHD4-203ENST00000535717 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.04□□□□□ -0.48
CHD4-203ENST00000535717 ADAMTS9Q9P2N4 1935 aa12.03□□□□□ -0.48
CHD4-203ENST00000535717 TCRBV7S3A2A0A539 114 aa12.03□□□□□ -0.48
CHD4-203ENST00000535717 RGSL1A5PLK6 1076 aa12.03□□□□□ -0.48
CHD4-203ENST00000535717 BUD23O43709 281 aaKnown RBP12.03□□□□□ -0.48
CHD4-203ENST00000535717 SYPP08247 313 aa12.03□□□□□ -0.48
CHD4-203ENST00000535717 HMGCLP35914 325 aa12.03□□□□□ -0.48
CHD4-203ENST00000535717 MAGEA6P43360 314 aa12.03□□□□□ -0.48
CHD4-203ENST00000535717 RABIFP47224 123 aa12.03□□□□□ -0.48
CHD4-203ENST00000535717 DR1Q01658 176 aa12.03□□□□□ -0.48
CHD4-203ENST00000535717 DPTQ07507 201 aa12.03□□□□□ -0.48
CHD4-203ENST00000535717 C2orf54Q08AI8 447 aa12.03□□□□□ -0.48
CHD4-203ENST00000535717 MTM1Q13496 603 aa12.03□□□□□ -0.48
CHD4-203ENST00000535717 PTK6Q13882 451 aa12.03□□□□□ -0.48
CHD4-203ENST00000535717 KCNJ11Q14654 390 aa12.03□□□□□ -0.48
CHD4-203ENST00000535717 TPRG1LQ5T0D9 272 aa12.03□□□□□ -0.48
CHD4-203ENST00000535717 ESRP1Q6NXG1 681 aaKnown RBP12.03□□□□□ -0.48
CHD4-203ENST00000535717 PPP1R21Q6ZMI0 780 aa12.03□□□□□ -0.48
CHD4-203ENST00000535717 GLT6D1Q7Z4J2 308 aa12.03□□□□□ -0.48
CHD4-203ENST00000535717 ALYREFQ86V81 257 aaKnown RBP12.03□□□□□ -0.48
CHD4-203ENST00000535717 GPR161Q8N6U8 529 aaKnown RBP12.03□□□□□ -0.48
CHD4-203ENST00000535717 GPR26Q8NDV2 337 aa12.03□□□□□ -0.48
CHD4-203ENST00000535717 OR2I1PQ8NGU4 316 aa12.03□□□□□ -0.48
CHD4-203ENST00000535717 KIF18AQ8NI77 898 aa12.03□□□□□ -0.48
CHD4-203ENST00000535717 FAM174AQ8TBP5 190 aa12.03□□□□□ -0.48
CHD4-203ENST00000535717 BRSK1Q8TDC3 778 aa12.03□□□□□ -0.48
CHD4-203ENST00000535717 SKA1Q96BD8 255 aa12.03□□□□□ -0.48
CHD4-203ENST00000535717 AP2M1Q96CW1 435 aa12.03□□□□□ -0.48
CHD4-203ENST00000535717 RUNDC3BQ96NL0 473 aa12.03□□□□□ -0.48
CHD4-203ENST00000535717 AGAP2Q99490 1192 aa12.03□□□□□ -0.48
CHD4-203ENST00000535717 RIOK2Q9BVS4 552 aaKnown RBP12.03□□□□□ -0.48
CHD4-203ENST00000535717 GTPBP2Q9BX10 602 aaKnown RBP12.03□□□□□ -0.48
CHD4-203ENST00000535717 ZDHHC5Q9C0B5 715 aa12.03□□□□□ -0.48
CHD4-203ENST00000535717 BPIFA1Q9NP55 256 aa12.03□□□□□ -0.48
CHD4-203ENST00000535717 CASS4Q9NQ75 786 aa12.03□□□□□ -0.48
CHD4-203ENST00000535717 PKD2L2Q9NZM6 624 aa12.03□□□□□ -0.48
CHD4-203ENST00000535717 IL17CQ9P0M4 197 aa12.03□□□□□ -0.48
CHD4-203ENST00000535717 OR1A2Q9Y585 309 aa12.03□□□□□ -0.48
CHD4-203ENST00000535717 ARL5AQ9Y689 179 aa12.03□□□□□ -0.48
CHD4-203ENST00000535717 TOR1BO14657 336 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms