RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 MYF5P13349 255 aa10.8□□□□□ -0.68
CCDC60-202ENST00000535685 KRT10P13645 584 aa10.8□□□□□ -0.68
CCDC60-202ENST00000535685 CTSEP14091 401 aa10.8□□□□□ -0.68
CCDC60-202ENST00000535685 PNLIPP16233 465 aa10.8□□□□□ -0.68
CCDC60-202ENST00000535685 MX2P20592 715 aa10.8□□□□□ -0.68
CCDC60-202ENST00000535685 TGM2P21980 687 aa10.8□□□□□ -0.68
CCDC60-202ENST00000535685 ARHGAP25P42331 645 aa10.8□□□□□ -0.68
CCDC60-202ENST00000535685 TAS2R40P59535 323 aa10.8□□□□□ -0.68
CCDC60-202ENST00000535685 ERVPABLB-1P60509 514 aa10.8□□□□□ -0.68
CCDC60-202ENST00000535685 RPL26P61254 145 aaKnown RBP10.8□□□□□ -0.68
CCDC60-202ENST00000535685 COL28A1Q2UY09 1125 aa10.8□□□□□ -0.68
CCDC60-202ENST00000535685 ATP13A4Q4VNC1 1196 aa10.8□□□□□ -0.68
CCDC60-202ENST00000535685 ARMC12Q5T9G4 340 aa10.8□□□□□ -0.68
CCDC60-202ENST00000535685 TECPR1Q7Z6L1 1165 aa10.8□□□□□ -0.68
CCDC60-202ENST00000535685 PDZD3Q86UT5 571 aa10.8□□□□□ -0.68
CCDC60-202ENST00000535685 BPHLQ86WA6 291 aaPredicted RBP10.8□□□□□ -0.68
CCDC60-202ENST00000535685 NDUFAF2Q8N183 169 aa10.8□□□□□ -0.68
CCDC60-202ENST00000535685 PQLC3Q8N755 202 aa10.8□□□□□ -0.68
CCDC60-202ENST00000535685 PLPP7Q8NBV4 271 aa10.8□□□□□ -0.68
CCDC60-202ENST00000535685 KCTD6Q8NC69 237 aa10.8□□□□□ -0.68
CCDC60-202ENST00000535685 GPR156Q8NFN8 814 aa10.8□□□□□ -0.68
CCDC60-202ENST00000535685 OR1E3Q8WZA6 343 aa10.8□□□□□ -0.68
CCDC60-202ENST00000535685 HDAC11Q96DB2 347 aa10.8□□□□□ -0.68
CCDC60-202ENST00000535685 DTD2Q96FN9 168 aa10.8□□□□□ -0.68
CCDC60-202ENST00000535685 TEX101Q9BY14 249 aa10.8□□□□□ -0.68
CCDC60-202ENST00000535685 POLR1EQ9GZS1 481 aaKnown RBP10.8□□□□□ -0.68
CCDC60-202ENST00000535685 WDR26Q9H7D7 661 aa10.8□□□□□ -0.68
CCDC60-202ENST00000535685 POLR1BQ9H9Y6 1135 aa10.8□□□□□ -0.68
CCDC60-202ENST00000535685 HAUS2Q9NVX0 235 aa10.8□□□□□ -0.68
CCDC60-202ENST00000535685 ZNHIT6Q9NWK9 470 aaKnown RBP10.8□□□□□ -0.68
CCDC60-202ENST00000535685 DNPEPQ9ULA0 475 aa10.8□□□□□ -0.68
CCDC60-202ENST00000535685 INTUQ9ULD6 942 aa10.8□□□□□ -0.68
CCDC60-202ENST00000535685 RPL26L1Q9UNX3 145 aaKnown RBP10.8□□□□□ -0.68
CCDC60-202ENST00000535685 PCDHGA8Q9Y5G5 932 aa10.8□□□□□ -0.68
CCDC60-202ENST00000535685 BAHCC1Q9P281 2608 aa10.79□□□□□ -0.68
CCDC60-202ENST00000535685 TTC24A2A3L6 582 aaPredicted RBP10.79□□□□□ -0.68
CCDC60-202ENST00000535685 TMEM202A6NGA9 273 aa10.79□□□□□ -0.68
CCDC60-202ENST00000535685 RRP8O43159 456 aaKnown RBP10.79□□□□□ -0.68
CCDC60-202ENST00000535685 AKR1B10O60218 316 aa10.79□□□□□ -0.68
CCDC60-202ENST00000535685 CELA2BP08218 269 aaPredicted RBP10.79□□□□□ -0.68
CCDC60-202ENST00000535685 TPM1P09493 284 aa10.79□□□□□ -0.68
CCDC60-202ENST00000535685 MYCLP1P12525 358 aaPredicted RBP10.79□□□□□ -0.68
CCDC60-202ENST00000535685 ZNF30P17039 623 aa10.79□□□□□ -0.68
CCDC60-202ENST00000535685 LHCGRP22888 699 aa10.79□□□□□ -0.68
CCDC60-202ENST00000535685 KDELR1P24390 212 aa10.79□□□□□ -0.68
CCDC60-202ENST00000535685 ABCG1P45844 678 aa10.79□□□□□ -0.68
CCDC60-202ENST00000535685 MAXP61244 160 aa10.79□□□□□ -0.68
CCDC60-202ENST00000535685 SKOR1P84550 965 aa10.79□□□□□ -0.68
CCDC60-202ENST00000535685 SEMG2Q02383 582 aa10.79□□□□□ -0.68
CCDC60-202ENST00000535685 ACOX1Q15067 660 aa10.79□□□□□ -0.68
CCDC60-202ENST00000535685 PERM1Q5SV97 790 aa10.79□□□□□ -0.68
CCDC60-202ENST00000535685 LRRC38Q5VT99 294 aa10.79□□□□□ -0.68
CCDC60-202ENST00000535685 C19orf48Q6RUI8 117 aa10.79□□□□□ -0.68
CCDC60-202ENST00000535685 RBM44Q6ZP01 1051 aaKnown RBP10.79□□□□□ -0.68
CCDC60-202ENST00000535685 USP45Q70EL2 814 aa10.79□□□□□ -0.68
CCDC60-202ENST00000535685 ZNF765Q7L2R6 523 aa10.79□□□□□ -0.68
CCDC60-202ENST00000535685 C17orf82Q86X59 251 aaPredicted RBP10.79□□□□□ -0.68
CCDC60-202ENST00000535685 RHOT2Q8IXI1 618 aa10.79□□□□□ -0.68
CCDC60-202ENST00000535685 PELI3Q8N2H9 469 aa10.79□□□□□ -0.68
CCDC60-202ENST00000535685 ZNF511Q8NB15 262 aa10.79□□□□□ -0.68
CCDC60-202ENST00000535685 HNRNPLLQ8WVV9 542 aaKnown RBP10.79□□□□□ -0.68
CCDC60-202ENST00000535685 NUS1Q96E22 293 aa10.79□□□□□ -0.68
CCDC60-202ENST00000535685 PDXPQ96GD0 296 aa10.79□□□□□ -0.68
CCDC60-202ENST00000535685 SCARF2Q96GP6 870 aaPredicted RBP10.79□□□□□ -0.68
CCDC60-202ENST00000535685 HIC2Q96JB3 615 aa10.79□□□□□ -0.68
CCDC60-202ENST00000535685 RNF157Q96PX1 679 aa10.79□□□□□ -0.68
CCDC60-202ENST00000535685 LYSMD1Q96S90 227 aa10.79□□□□□ -0.68
CCDC60-202ENST00000535685 SEMA3CQ99985 751 aa10.79□□□□□ -0.68
CCDC60-202ENST00000535685 PACSIN1Q9BY11 444 aa10.79□□□□□ -0.68
CCDC60-202ENST00000535685 TSPY26PQ9H489 355 aa10.79□□□□□ -0.68
CCDC60-202ENST00000535685 FGF22Q9HCT0 170 aa10.79□□□□□ -0.68
CCDC60-202ENST00000535685 NT5MQ9NPB1 228 aa10.79□□□□□ -0.68
CCDC60-202ENST00000535685 PHPT1Q9NRX4 125 aaPredicted RBP10.79□□□□□ -0.68
CCDC60-202ENST00000535685 ABHD10Q9NUJ1 306 aa10.79□□□□□ -0.68
CCDC60-202ENST00000535685 APPL1Q9UKG1 709 aa10.79□□□□□ -0.68
CCDC60-202ENST00000535685 GPR34Q9UPC5 381 aa10.79□□□□□ -0.68
CCDC60-202ENST00000535685 DOLKQ9UPQ8 538 aa10.79□□□□□ -0.68
CCDC60-202ENST00000535685 PCDHB1Q9Y5F3 818 aa10.79□□□□□ -0.68
CCDC60-202ENST00000535685 ENTPD2Q9Y5L3 495 aa10.79□□□□□ -0.68
CCDC60-202ENST00000535685 RAI2Q9Y5P3 530 aa10.79□□□□□ -0.68
CCDC60-202ENST00000535685 LOC400499M0QZD8 3231 aa10.79□□□□□ -0.68
CCDC60-202ENST00000535685 A0A0J9YYE9 177 aa10.78□□□□□ -0.68
CCDC60-202ENST00000535685 PRSS38A1L453 326 aa10.78□□□□□ -0.68
CCDC60-202ENST00000535685 NPIPB15A6NHN6 443 aaPredicted RBP10.78□□□□□ -0.68
CCDC60-202ENST00000535685 TMX2-CTNND1H3BSU7 103 aa10.78□□□□□ -0.68
CCDC60-202ENST00000535685 MFAP3LO75121 409 aa10.78□□□□□ -0.68
CCDC60-202ENST00000535685 USP12O75317 370 aa10.78□□□□□ -0.68
CCDC60-202ENST00000535685 PRLP01236 227 aa10.78□□□□□ -0.68
CCDC60-202ENST00000535685 TRBC1P01850 177 aa10.78□□□□□ -0.68
CCDC60-202ENST00000535685 PYGLP06737 847 aa10.78□□□□□ -0.68
CCDC60-202ENST00000535685 PDHA1P08559 390 aa10.78□□□□□ -0.68
CCDC60-202ENST00000535685 CCNB1P14635 433 aa10.78□□□□□ -0.68
CCDC60-202ENST00000535685 GLB1P16278 677 aa10.78□□□□□ -0.68
CCDC60-202ENST00000535685 SLC1A1P43005 524 aa10.78□□□□□ -0.68
CCDC60-202ENST00000535685 SSR1P43307 286 aaKnown RBP10.78□□□□□ -0.68
CCDC60-202ENST00000535685 SLC10A2Q12908 348 aaPredicted RBP10.78□□□□□ -0.68
CCDC60-202ENST00000535685 TBX2Q13207 712 aaPredicted RBP10.78□□□□□ -0.68
CCDC60-202ENST00000535685 ARHGEF7Q14155 803 aa10.78□□□□□ -0.68
CCDC60-202ENST00000535685 ELOAQ14241 798 aaKnown RBP10.78□□□□□ -0.68
CCDC60-202ENST00000535685 IHHQ14623 411 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms