RNA–Protein interactions for RNA: ENST00000533733.5

ATM-222, Transcript of ATM serine/threonine kinase, human

TSL 1 (best)

Gene ATM, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-222	ENST00000533733	GRM2	Q14416	872 aa		11.95	□□□□□ -0.5
ATM-222	ENST00000533733	PABPC1L	Q4VXU2	614 aa	Known RBP	11.95	□□□□□ -0.5
ATM-222	ENST00000533733	UNC50	Q53HI1	259 aa		11.95	□□□□□ -0.5
ATM-222	ENST00000533733	HECTD3	Q5T447	861 aa		11.95	□□□□□ -0.5
ATM-222	ENST00000533733	IL31	Q6EBC2	164 aa		11.95	□□□□□ -0.5
ATM-222	ENST00000533733	RNF19B	Q6ZMZ0	732 aa		11.95	□□□□□ -0.5
ATM-222	ENST00000533733	RNF111	Q6ZNA4	994 aa		11.95	□□□□□ -0.5
ATM-222	ENST00000533733	LRRC43	Q8N309	656 aa		11.95	□□□□□ -0.5
ATM-222	ENST00000533733	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	11.95	□□□□□ -0.5
ATM-222	ENST00000533733	PHF21B	Q96EK2	531 aa		11.95	□□□□□ -0.5
ATM-222	ENST00000533733	C19orf60	Q96EN9	201 aa		11.95	□□□□□ -0.5
ATM-222	ENST00000533733	PPP1R36	Q96LQ0	422 aa		11.95	□□□□□ -0.5
ATM-222	ENST00000533733	GBP5	Q96PP8	586 aa		11.95	□□□□□ -0.5
ATM-222	ENST00000533733	HOPX	Q9BPY8	73 aa	Predicted RBP	11.95	□□□□□ -0.5
ATM-222	ENST00000533733	CENPK	Q9BS16	269 aa		11.95	□□□□□ -0.5
ATM-222	ENST00000533733	EFHD1	Q9BUP0	239 aa		11.95	□□□□□ -0.5
ATM-222	ENST00000533733	NUSAP1	Q9BXS6	441 aa	Known RBP	11.95	□□□□□ -0.5
ATM-222	ENST00000533733	CYP4F12	Q9HCS2	524 aa		11.95	□□□□□ -0.5
ATM-222	ENST00000533733	CACNA2D2	Q9NY47	1150 aa		11.95	□□□□□ -0.5
ATM-222	ENST00000533733	MARCH4	Q9P2E8	410 aa	Predicted RBP	11.95	□□□□□ -0.5
ATM-222	ENST00000533733	NDUFAF1	Q9Y375	327 aa		11.95	□□□□□ -0.5
ATM-222	ENST00000533733	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	11.94	□□□□□ -0.5
ATM-222	ENST00000533733	PRSS51	A0A1B0GVH4	220 aa		11.94	□□□□□ -0.5
ATM-222	ENST00000533733	CARNS1	A5YM72	827 aa		11.94	□□□□□ -0.5
ATM-222	ENST00000533733	TMEM233	B4DJY2	109 aa		11.94	□□□□□ -0.5
ATM-222	ENST00000533733		H7C0S8	307 aa		11.94	□□□□□ -0.5
ATM-222	ENST00000533733	ACOT8	O14734	319 aa		11.94	□□□□□ -0.5
ATM-222	ENST00000533733	AZIN1	O14977	448 aa		11.94	□□□□□ -0.5
ATM-222	ENST00000533733	CFLAR	O15519	480 aa		11.94	□□□□□ -0.5
ATM-222	ENST00000533733	AHCYL1	O43865	530 aa		11.94	□□□□□ -0.5
ATM-222	ENST00000533733	NRP2	O60462	931 aa		11.94	□□□□□ -0.5
ATM-222	ENST00000533733	SOAT2	O75908	522 aa		11.94	□□□□□ -0.5
ATM-222	ENST00000533733	SRP72	O76094	671 aa	Known RBP	11.94	□□□□□ -0.5
ATM-222	ENST00000533733	MATN4	O95460	622 aa		11.94	□□□□□ -0.5
ATM-222	ENST00000533733	C8B	P07358	591 aa		11.94	□□□□□ -0.5
ATM-222	ENST00000533733	GALT	P07902	379 aa		11.94	□□□□□ -0.5
ATM-222	ENST00000533733	VCL	P18206	1134 aa		11.94	□□□□□ -0.5
ATM-222	ENST00000533733	XRCC1	P18887	633 aa	Predicted RBP	11.94	□□□□□ -0.5
ATM-222	ENST00000533733	KCNA5	P22460	613 aa		11.94	□□□□□ -0.5
ATM-222	ENST00000533733	PEX2	P28328	305 aa		11.94	□□□□□ -0.5
ATM-222	ENST00000533733	ADAR	P55265	1226 aa	Known RBP	11.94	□□□□□ -0.5
ATM-222	ENST00000533733	FOXM1	Q08050	763 aa		11.94	□□□□□ -0.5
ATM-222	ENST00000533733	DUSP4	Q13115	394 aa		11.94	□□□□□ -0.5
ATM-222	ENST00000533733	ZNF177	Q13360	481 aa	Predicted RBP	11.94	□□□□□ -0.5
ATM-222	ENST00000533733	IHH	Q14623	411 aa		11.94	□□□□□ -0.5
ATM-222	ENST00000533733	ARHGEF6	Q15052	776 aa		11.94	□□□□□ -0.5
ATM-222	ENST00000533733	GRAMD1B	Q3KR37	738 aa		11.94	□□□□□ -0.5
ATM-222	ENST00000533733	AGK	Q53H12	422 aa		11.94	□□□□□ -0.5
ATM-222	ENST00000533733	REP15	Q6BDI9	236 aa		11.94	□□□□□ -0.5
ATM-222	ENST00000533733	TMEM207	Q6UWW9	146 aa		11.94	□□□□□ -0.5
ATM-222	ENST00000533733	GLT6D1	Q7Z4J2	308 aa		11.94	□□□□□ -0.5
ATM-222	ENST00000533733	STK40	Q8N2I9	435 aa		11.94	□□□□□ -0.5
ATM-222	ENST00000533733	MARVELD2	Q8N4S9	558 aa		11.94	□□□□□ -0.5
ATM-222	ENST00000533733	TTC9B	Q8N6N2	239 aa		11.94	□□□□□ -0.5
ATM-222	ENST00000533733	FBXO22	Q8NEZ5	403 aa		11.94	□□□□□ -0.5
ATM-222	ENST00000533733	ATOH8	Q96SQ7	321 aa		11.94	□□□□□ -0.5
ATM-222	ENST00000533733	LBHD1	Q9BQE6	289 aa	Predicted RBP	11.94	□□□□□ -0.5
ATM-222	ENST00000533733	NACA2	Q9H009	215 aa		11.94	□□□□□ -0.5
ATM-222	ENST00000533733	CCSER2	Q9H7U1	834 aa		11.94	□□□□□ -0.5
ATM-222	ENST00000533733	HMX1	Q9NP08	348 aa	Predicted RBP	11.94	□□□□□ -0.5
ATM-222	ENST00000533733	SCUBE2	Q9NQ36	999 aa		11.94	□□□□□ -0.5
ATM-222	ENST00000533733	MTRR	Q9UBK8	725 aa		11.94	□□□□□ -0.5
ATM-222	ENST00000533733	CROT	Q9UKG9	612 aa		11.94	□□□□□ -0.5
ATM-222	ENST00000533733	G3BP2	Q9UN86	482 aa	Known RBP	11.94	□□□□□ -0.5
ATM-222	ENST00000533733	SLC27A5	Q9Y2P5	690 aa		11.94	□□□□□ -0.5
ATM-222	ENST00000533733	CRYL1	Q9Y2S2	319 aa		11.94	□□□□□ -0.5
ATM-222	ENST00000533733	MTF2	Q9Y483	593 aa	Predicted RBP	11.94	□□□□□ -0.5
ATM-222	ENST00000533733	ARL5A	Q9Y689	179 aa		11.94	□□□□□ -0.5
ATM-222	ENST00000533733	KIAA1671	Q9BY89	1806 aa		11.94	□□□□□ -0.5
ATM-222	ENST00000533733	DYTN	A2CJ06	578 aa		11.94	□□□□□ -0.5
ATM-222	ENST00000533733	TYW5	A2RUC4	315 aa	Known RBP	11.94	□□□□□ -0.5
ATM-222	ENST00000533733	VPS26A	O75436	327 aa		11.94	□□□□□ -0.5
ATM-222	ENST00000533733	NDUFS3	O75489	264 aa		11.94	□□□□□ -0.5
ATM-222	ENST00000533733	RHOBTB1	O94844	696 aa		11.94	□□□□□ -0.5
ATM-222	ENST00000533733	VNN2	O95498	520 aa		11.94	□□□□□ -0.5
ATM-222	ENST00000533733	FES	P07332	822 aa		11.94	□□□□□ -0.5
ATM-222	ENST00000533733	RHOC	P08134	193 aa		11.94	□□□□□ -0.5
ATM-222	ENST00000533733	LPO	P22079	712 aa	Predicted RBP	11.94	□□□□□ -0.5
ATM-222	ENST00000533733	PAX7	P23759	505 aa		11.94	□□□□□ -0.5
ATM-222	ENST00000533733	PGGT1B	P53609	377 aa		11.94	□□□□□ -0.5
ATM-222	ENST00000533733	C1QTNF8	P60827	252 aa		11.94	□□□□□ -0.5
ATM-222	ENST00000533733	LCP2	Q13094	533 aa		11.94	□□□□□ -0.5
ATM-222	ENST00000533733	USP41	Q3LFD5	358 aa		11.94	□□□□□ -0.5
ATM-222	ENST00000533733	SFT2D3	Q587I9	215 aa		11.94	□□□□□ -0.5
ATM-222	ENST00000533733	RTP2	Q5QGT7	225 aa		11.94	□□□□□ -0.5
ATM-222	ENST00000533733	KANK2	Q63ZY3	851 aa		11.94	□□□□□ -0.5
ATM-222	ENST00000533733	TPGS2	Q68CL5	300 aa		11.94	□□□□□ -0.5
ATM-222	ENST00000533733	ANKS6	Q68DC2	871 aa		11.94	□□□□□ -0.5
ATM-222	ENST00000533733	UGT3A1	Q6NUS8	523 aa		11.94	□□□□□ -0.5
ATM-222	ENST00000533733	ZNF549	Q6P9A3	640 aa		11.94	□□□□□ -0.5
ATM-222	ENST00000533733	GK5	Q6ZS86	529 aa		11.94	□□□□□ -0.5
ATM-222	ENST00000533733	HERC6	Q8IVU3	1022 aa		11.94	□□□□□ -0.5
ATM-222	ENST00000533733	PTGR2	Q8N8N7	351 aa	Predicted RBP	11.94	□□□□□ -0.5
ATM-222	ENST00000533733	BHLHE22	Q8NFJ8	381 aa	Predicted RBP	11.94	□□□□□ -0.5
ATM-222	ENST00000533733	RAET1E	Q8TD07	263 aa		11.94	□□□□□ -0.5
ATM-222	ENST00000533733	LPGAT1	Q92604	370 aa		11.94	□□□□□ -0.5
ATM-222	ENST00000533733	PBXIP1	Q96AQ6	731 aa		11.94	□□□□□ -0.5
ATM-222	ENST00000533733	PTER	Q96BW5	349 aa		11.94	□□□□□ -0.5
ATM-222	ENST00000533733	TMA16	Q96EY4	203 aa	Known RBP	11.94	□□□□□ -0.5
ATM-222	ENST00000533733	TRMT2B	Q96GJ1	504 aa	Known RBP	11.94	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms