RNA–Protein interactions for RNA: ENST00000533682.1

CLP1-205, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLP1, Length 2,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-205ENST00000533682 RPL10LQ96L21 214 aaKnown RBP11.95□□□□□ -0.5
CLP1-205ENST00000533682 NUDCD1Q96RS6 583 aa11.95□□□□□ -0.5
CLP1-205ENST00000533682 SLC46A2Q9BY10 475 aa11.95□□□□□ -0.5
CLP1-205ENST00000533682 FAM50BQ9Y247 325 aa11.95□□□□□ -0.5
CLP1-205ENST00000533682 NOTCH4Q99466 2003 aa11.94□□□□□ -0.5
CLP1-205ENST00000533682 TMEM114B3SHH9 223 aa11.94□□□□□ -0.5
CLP1-205ENST00000533682 MATN2O00339 956 aa11.94□□□□□ -0.5
CLP1-205ENST00000533682 GRID2O43424 1007 aa11.94□□□□□ -0.5
CLP1-205ENST00000533682 OR1I1O60431 355 aa11.94□□□□□ -0.5
CLP1-205ENST00000533682 ALPIP09923 528 aa11.94□□□□□ -0.5
CLP1-205ENST00000533682 LTA4HP09960 611 aaKnown RBP11.94□□□□□ -0.5
CLP1-205ENST00000533682 PMLP29590 882 aa11.94□□□□□ -0.5
CLP1-205ENST00000533682 FMO4P31512 558 aa11.94□□□□□ -0.5
CLP1-205ENST00000533682 FAM83EQ2M2I3 478 aa11.94□□□□□ -0.5
CLP1-205ENST00000533682 PSAPL1Q6NUJ1 521 aa11.94□□□□□ -0.5
CLP1-205ENST00000533682 ISCA2Q86U28 154 aa11.94□□□□□ -0.5
CLP1-205ENST00000533682 ITIH5Q86UX2 942 aa11.94□□□□□ -0.5
CLP1-205ENST00000533682 FIBCD1Q8N539 461 aa11.94□□□□□ -0.5
CLP1-205ENST00000533682 RDH11Q8TC12 318 aa11.94□□□□□ -0.5
CLP1-205ENST00000533682 WDR60Q8WVS4 1066 aa11.94□□□□□ -0.5
CLP1-205ENST00000533682 EXT2Q93063 718 aa11.94□□□□□ -0.5
CLP1-205ENST00000533682 TCEAL4Q96EI5 215 aa11.94□□□□□ -0.5
CLP1-205ENST00000533682 NLE1Q9NVX2 485 aaPredicted RBP11.94□□□□□ -0.5
CLP1-205ENST00000533682 DNAJC28Q9NX36 388 aa11.94□□□□□ -0.5
CLP1-205ENST00000533682 GOLGA8CPA6NN73 597 aa11.94□□□□□ -0.5
CLP1-205ENST00000533682 A8MT66 165 aa11.94□□□□□ -0.5
CLP1-205ENST00000533682 A8MX80 341 aa11.94□□□□□ -0.5
CLP1-205ENST00000533682 WISP3O95389 354 aaPredicted RBP11.94□□□□□ -0.5
CLP1-205ENST00000533682 LRG1P02750 347 aa11.94□□□□□ -0.5
CLP1-205ENST00000533682 LINGO3P0C6S8 592 aa11.94□□□□□ -0.5
CLP1-205ENST00000533682 CDC25CP30307 473 aa11.94□□□□□ -0.5
CLP1-205ENST00000533682 CD70P32970 193 aa11.94□□□□□ -0.5
CLP1-205ENST00000533682 RPL14P50914 215 aaKnown RBP11.94□□□□□ -0.5
CLP1-205ENST00000533682 STC1P52823 247 aa11.94□□□□□ -0.5
CLP1-205ENST00000533682 RHOAP61586 193 aa11.94□□□□□ -0.5
CLP1-205ENST00000533682 ROR2Q01974 943 aaKnown RBP11.94□□□□□ -0.5
CLP1-205ENST00000533682 SEMG2Q02383 582 aa11.94□□□□□ -0.5
CLP1-205ENST00000533682 RFTN1Q14699 578 aaPredicted RBP11.94□□□□□ -0.5
CLP1-205ENST00000533682 PABPC1LQ4VXU2 614 aaKnown RBP11.94□□□□□ -0.5
CLP1-205ENST00000533682 FBXO48Q5FWF7 155 aa11.94□□□□□ -0.5
CLP1-205ENST00000533682 FAM91A1Q658Y4 838 aa11.94□□□□□ -0.5
CLP1-205ENST00000533682 TMEM198Q66K66 360 aa11.94□□□□□ -0.5
CLP1-205ENST00000533682 MRNIPQ6NTE8 343 aa11.94□□□□□ -0.5
CLP1-205ENST00000533682 NCEH1Q6PIU2 408 aa11.94□□□□□ -0.5
CLP1-205ENST00000533682 KREMEN2Q8NCW0 462 aa11.94□□□□□ -0.5
CLP1-205ENST00000533682 MYLIPQ8WY64 445 aa11.94□□□□□ -0.5
CLP1-205ENST00000533682 MRPS31Q92665 395 aaKnown RBP11.94□□□□□ -0.5
CLP1-205ENST00000533682 CCDC97Q96F63 343 aaPredicted RBP11.94□□□□□ -0.5
CLP1-205ENST00000533682 MARK4Q96L34 752 aa11.94□□□□□ -0.5
CLP1-205ENST00000533682 TCF25Q9BQ70 676 aa11.94□□□□□ -0.5
CLP1-205ENST00000533682 PAPOLBQ9NRJ5 636 aaKnown RBP11.94□□□□□ -0.5
CLP1-205ENST00000533682 TAGLN3Q9UI15 199 aa11.94□□□□□ -0.5
CLP1-205ENST00000533682 FKBPLQ9UIM3 349 aa11.94□□□□□ -0.5
CLP1-205ENST00000533682 MED16Q9Y2X0 877 aa11.94□□□□□ -0.5
CLP1-205ENST00000533682 RAP2CQ9Y3L5 183 aa11.94□□□□□ -0.5
CLP1-205ENST00000533682 DNAH14Q0VDD8 3507 aa11.93□□□□□ -0.5
CLP1-205ENST00000533682 LRRC14BA6NHZ5 514 aa11.93□□□□□ -0.5
CLP1-205ENST00000533682 H0Y3Z8 333 aa11.93□□□□□ -0.5
CLP1-205ENST00000533682 H3BMM5 538 aa11.93□□□□□ -0.5
CLP1-205ENST00000533682 CRTAMO95727 393 aa11.93□□□□□ -0.5
CLP1-205ENST00000533682 PPM1AP35813 382 aa11.93□□□□□ -0.5
CLP1-205ENST00000533682 CTSOP43234 321 aaPredicted RBP11.93□□□□□ -0.5
CLP1-205ENST00000533682 SLC25A3Q00325 362 aa11.93□□□□□ -0.5
CLP1-205ENST00000533682 SLC14A2Q15849 920 aa11.93□□□□□ -0.5
CLP1-205ENST00000533682 SETMARQ53H47 684 aaPredicted RBP11.93□□□□□ -0.5
CLP1-205ENST00000533682 AGAP9Q5VTM2 703 aa11.93□□□□□ -0.5
CLP1-205ENST00000533682 PLPP4Q5VZY2 271 aa11.93□□□□□ -0.5
CLP1-205ENST00000533682 FBXO46Q6PJ61 603 aaPredicted RBP11.93□□□□□ -0.5
CLP1-205ENST00000533682 NECAB2Q7Z6G3 386 aa11.93□□□□□ -0.5
CLP1-205ENST00000533682 CMTM8Q8IZV2 173 aa11.93□□□□□ -0.5
CLP1-205ENST00000533682 HJURPQ8NCD3 748 aaPredicted RBP11.93□□□□□ -0.5
CLP1-205ENST00000533682 SREK1Q8WXA9 508 aaKnown RBP11.93□□□□□ -0.5
CLP1-205ENST00000533682 BADQ92934 168 aa11.93□□□□□ -0.5
CLP1-205ENST00000533682 DDX50Q9BQ39 737 aaKnown RBP11.93□□□□□ -0.5
CLP1-205ENST00000533682 TNKS2Q9H2K2 1166 aa11.93□□□□□ -0.5
CLP1-205ENST00000533682 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.93□□□□□ -0.5
CLP1-205ENST00000533682 POLR3BQ9NW08 1133 aaPredicted RBP11.93□□□□□ -0.5
CLP1-205ENST00000533682 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.93□□□□□ -0.5
CLP1-205ENST00000533682 AOC1P19801 751 aa11.92□□□□□ -0.5
CLP1-205ENST00000533682 ATP5F1P24539 256 aaPredicted RBP11.92□□□□□ -0.5
CLP1-205ENST00000533682 TAF1AQ15573 450 aaPredicted RBP11.92□□□□□ -0.5
CLP1-205ENST00000533682 TSNAXIP1Q2TAA8 658 aa11.92□□□□□ -0.5
CLP1-205ENST00000533682 LSM12Q3MHD2 195 aaKnown RBP11.92□□□□□ -0.5
CLP1-205ENST00000533682 KHDC1Q4VXA5 237 aaKnown RBP11.92□□□□□ -0.5
CLP1-205ENST00000533682 KDM1BQ8NB78 822 aa11.92□□□□□ -0.5
CLP1-205ENST00000533682 GPR150Q8NGU9 434 aa11.92□□□□□ -0.5
CLP1-205ENST00000533682 MCUR1Q96AQ8 359 aa11.92□□□□□ -0.5
CLP1-205ENST00000533682 ARMC5Q96C12 935 aa11.92□□□□□ -0.5
CLP1-205ENST00000533682 SLC30A3Q99726 388 aa11.92□□□□□ -0.5
CLP1-205ENST00000533682 SIKE1Q9BRV8 207 aa11.92□□□□□ -0.5
CLP1-205ENST00000533682 TUBB6Q9BUF5 446 aa11.92□□□□□ -0.5
CLP1-205ENST00000533682 RETREG1Q9H6L5 497 aa11.92□□□□□ -0.5
CLP1-205ENST00000533682 IL23AQ9NPF7 189 aa11.92□□□□□ -0.5
CLP1-205ENST00000533682 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.92□□□□□ -0.5
CLP1-205ENST00000533682 EVLQ9UI08 416 aaPredicted RBP11.92□□□□□ -0.5
CLP1-205ENST00000533682 IKZF3Q9UKT9 509 aa11.92□□□□□ -0.5
CLP1-205ENST00000533682 INTS6Q9UL03 887 aaKnown RBP11.92□□□□□ -0.5
CLP1-205ENST00000533682 HCFC2Q9Y5Z7 792 aa11.92□□□□□ -0.5
CLP1-205ENST00000533682 C2orf81A6NN90 581 aa11.92□□□□□ -0.5
CLP1-205ENST00000533682 LEFTY2O00292 366 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms