RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 TBC1D25Q3MII6 688 aa17.78■□□□□ 0.44
SMG1-203ENST00000532700 C3orf38Q5JPI3 329 aa17.78■□□□□ 0.44
SMG1-203ENST00000532700 RALGPS1Q5JS13 557 aa17.78■□□□□ 0.44
SMG1-203ENST00000532700 BBS5Q8N3I7 341 aa17.78■□□□□ 0.44
SMG1-203ENST00000532700 GPR156Q8NFN8 814 aa17.78■□□□□ 0.44
SMG1-203ENST00000532700 SNIP1Q8TAD8 396 aaKnown RBP17.78■□□□□ 0.44
SMG1-203ENST00000532700 NSMCE1Q8WV22 266 aa17.78■□□□□ 0.44
SMG1-203ENST00000532700 RNF25Q96BH1 459 aaPredicted RBP17.78■□□□□ 0.44
SMG1-203ENST00000532700 CCDC42Q96M95 316 aa17.78■□□□□ 0.44
SMG1-203ENST00000532700 WDR24Q96S15 920 aa17.78■□□□□ 0.44
SMG1-203ENST00000532700 SYNDIG1Q9H7V2 258 aa17.78■□□□□ 0.44
SMG1-203ENST00000532700 ASCL3Q9NQ33 180 aa17.78■□□□□ 0.44
SMG1-203ENST00000532700 SPATS2LQ9NUQ6 558 aaKnown RBP17.78■□□□□ 0.44
SMG1-203ENST00000532700 MOSPD1Q9UJG1 213 aa17.78■□□□□ 0.44
SMG1-203ENST00000532700 SATB2Q9UPW6 733 aa17.78■□□□□ 0.44
SMG1-203ENST00000532700 HEY1Q9Y5J3 304 aa17.78■□□□□ 0.44
SMG1-203ENST00000532700 GOLGA6CA6NDK9 693 aa17.77■□□□□ 0.44
SMG1-203ENST00000532700 GOLGA6BA6NDN3 693 aa17.77■□□□□ 0.44
SMG1-203ENST00000532700 B4DGG1 531 aa17.77■□□□□ 0.44
SMG1-203ENST00000532700 CLDN7O95471 211 aa17.77■□□□□ 0.44
SMG1-203ENST00000532700 JCHAINP01591 159 aa17.77■□□□□ 0.44
SMG1-203ENST00000532700 HOXC4P09017 264 aaPredicted RBP17.77■□□□□ 0.44
SMG1-203ENST00000532700 GOLGA6DP0CG33 693 aa17.77■□□□□ 0.44
SMG1-203ENST00000532700 CYP2A6P11509 494 aaPredicted RBP17.77■□□□□ 0.44
SMG1-203ENST00000532700 AK4P27144 223 aaPredicted RBP17.77■□□□□ 0.44
SMG1-203ENST00000532700 CCL7P80098 99 aa17.77■□□□□ 0.44
SMG1-203ENST00000532700 SKOR1P84550 965 aa17.77■□□□□ 0.44
SMG1-203ENST00000532700 PPIDQ08752 370 aaKnown RBP17.77■□□□□ 0.44
SMG1-203ENST00000532700 ZFYVE27Q5T4F4 411 aa17.77■□□□□ 0.44
SMG1-203ENST00000532700 MFSD7Q6UXD7 560 aa17.77■□□□□ 0.44
SMG1-203ENST00000532700 TMPRSS9Q7Z410 1059 aa17.77■□□□□ 0.44
SMG1-203ENST00000532700 TAF8Q7Z7C8 310 aa17.77■□□□□ 0.44
SMG1-203ENST00000532700 LRRC49Q8IUZ0 686 aa17.77■□□□□ 0.44
SMG1-203ENST00000532700 CCDC13Q8IYE1 715 aa17.77■□□□□ 0.44
SMG1-203ENST00000532700 SDR16C5Q8N3Y7 309 aa17.77■□□□□ 0.44
SMG1-203ENST00000532700 CCNYQ8ND76 341 aa17.77■□□□□ 0.44
SMG1-203ENST00000532700 LPCAT1Q8NF37 534 aa17.77■□□□□ 0.44
SMG1-203ENST00000532700 TPCN2Q8NHX9 752 aa17.77■□□□□ 0.44
SMG1-203ENST00000532700 PATE1Q8WXA2 126 aa17.77■□□□□ 0.44
SMG1-203ENST00000532700 FATE1Q969F0 183 aa17.77■□□□□ 0.44
SMG1-203ENST00000532700 EID2BQ96D98 161 aa17.77■□□□□ 0.44
SMG1-203ENST00000532700 OLFM3Q96PB7 478 aa17.77■□□□□ 0.44
SMG1-203ENST00000532700 GOLGA6AQ9NYA3 693 aa17.77■□□□□ 0.44
SMG1-203ENST00000532700 SAE1Q9UBE0 346 aaPredicted RBP17.77■□□□□ 0.44
SMG1-203ENST00000532700 DOLKQ9UPQ8 538 aa17.77■□□□□ 0.44
SMG1-203ENST00000532700 TMEM98Q9Y2Y6 226 aa17.77■□□□□ 0.44
SMG1-203ENST00000532700 IGSF10Q6WRI0 2623 aa17.76■□□□□ 0.43
SMG1-203ENST00000532700 CAPN8A6NHC0 703 aa17.76■□□□□ 0.43
SMG1-203ENST00000532700 AGRPO00253 132 aa17.76■□□□□ 0.43
SMG1-203ENST00000532700 TNFRSF10CO14798 259 aa17.76■□□□□ 0.43
SMG1-203ENST00000532700 PECAM1P16284 738 aaPredicted RBP17.76■□□□□ 0.43
SMG1-203ENST00000532700 COMTP21964 271 aa17.76■□□□□ 0.43
SMG1-203ENST00000532700 CD86P42081 329 aa17.76■□□□□ 0.43
SMG1-203ENST00000532700 STC1P52823 247 aa17.76■□□□□ 0.43
SMG1-203ENST00000532700 MAZP56270 477 aaKnown RBP17.76■□□□□ 0.43
SMG1-203ENST00000532700 DYNLT1P63172 113 aa17.76■□□□□ 0.43
SMG1-203ENST00000532700 CCDC173Q0VFZ6 552 aa17.76■□□□□ 0.43
SMG1-203ENST00000532700 RAET1GQ6H3X3 334 aa17.76■□□□□ 0.43
SMG1-203ENST00000532700 TIGD7Q6NT04 549 aaPredicted RBP17.76■□□□□ 0.43
SMG1-203ENST00000532700 OGFOD3Q6PK18 319 aa17.76■□□□□ 0.43
SMG1-203ENST00000532700 DOK6Q6PKX4 331 aa17.76■□□□□ 0.43
SMG1-203ENST00000532700 LVRNQ6Q4G3 990 aa17.76■□□□□ 0.43
SMG1-203ENST00000532700 RBM44Q6ZP01 1051 aaKnown RBP17.76■□□□□ 0.43
SMG1-203ENST00000532700 USP45Q70EL2 814 aa17.76■□□□□ 0.43
SMG1-203ENST00000532700 GKN2Q86XP6 184 aa17.76■□□□□ 0.43
SMG1-203ENST00000532700 MAP7D3Q8IWC1 876 aa17.76■□□□□ 0.43
SMG1-203ENST00000532700 FAM46DQ8NEK8 389 aa17.76■□□□□ 0.43
SMG1-203ENST00000532700 NAF1Q96HR8 494 aaKnown RBP17.76■□□□□ 0.43
SMG1-203ENST00000532700 FOXP3Q9BZS1 431 aa17.76■□□□□ 0.43
SMG1-203ENST00000532700 CARS2Q9HA77 564 aaKnown RBP17.76■□□□□ 0.43
SMG1-203ENST00000532700 NCKIPSDQ9NZQ3 722 aa17.76■□□□□ 0.43
SMG1-203ENST00000532700 ATXN7L1Q9ULK2 861 aaPredicted RBP17.76■□□□□ 0.43
SMG1-203ENST00000532700 SUFUQ9UMX1 484 aa17.76■□□□□ 0.43
SMG1-203ENST00000532700 RNF215Q9Y6U7 377 aa17.76■□□□□ 0.43
SMG1-203ENST00000532700 A0A1W2PQ67 120 aa17.75■□□□□ 0.43
SMG1-203ENST00000532700 PSMD11O00231 422 aa17.75■□□□□ 0.43
SMG1-203ENST00000532700 KRT10P13645 584 aa17.75■□□□□ 0.43
SMG1-203ENST00000532700 GNPDA1P46926 289 aa17.75■□□□□ 0.43
SMG1-203ENST00000532700 IFI35P80217 286 aaPredicted RBP17.75■□□□□ 0.43
SMG1-203ENST00000532700 ARHGEF7Q14155 803 aa17.75■□□□□ 0.43
SMG1-203ENST00000532700 GALNT3Q14435 633 aa17.75■□□□□ 0.43
SMG1-203ENST00000532700 TCEAL1Q15170 157 aa17.75■□□□□ 0.43
SMG1-203ENST00000532700 QPCTQ16769 361 aa17.75■□□□□ 0.43
SMG1-203ENST00000532700 SOWAHCQ53LP3 525 aaPredicted RBP17.75■□□□□ 0.43
SMG1-203ENST00000532700 RHOT2Q8IXI1 618 aa17.75■□□□□ 0.43
SMG1-203ENST00000532700 Q8N9G6 341 aaPredicted RBP17.75■□□□□ 0.43
SMG1-203ENST00000532700 NAT6Q93015 286 aa17.75■□□□□ 0.43
SMG1-203ENST00000532700 HIC2Q96JB3 615 aa17.75■□□□□ 0.43
SMG1-203ENST00000532700 TRIB3Q96RU7 358 aa17.75■□□□□ 0.43
SMG1-203ENST00000532700 RIOK2Q9BVS4 552 aaKnown RBP17.75■□□□□ 0.43
SMG1-203ENST00000532700 POLR1BQ9H9Y6 1135 aa17.75■□□□□ 0.43
SMG1-203ENST00000532700 PCDH9Q9HC56 1237 aa17.75■□□□□ 0.43
SMG1-203ENST00000532700 OAS3Q9Y6K5 1087 aaKnown RBP17.75■□□□□ 0.43
SMG1-203ENST00000532700 RCCD1A6NED2 376 aa17.74■□□□□ 0.43
SMG1-203ENST00000532700 FADS2P1A8MWK0 482 aa17.74■□□□□ 0.43
SMG1-203ENST00000532700 D6RAR5 112 aa17.74■□□□□ 0.43
SMG1-203ENST00000532700 RPLP0P05388 317 aaKnown RBP17.74■□□□□ 0.43
SMG1-203ENST00000532700 PIRTP0C851 137 aa17.74■□□□□ 0.43
SMG1-203ENST00000532700 CDC25BP30305 580 aa17.74■□□□□ 0.43
SMG1-203ENST00000532700 ARHGAP25P42331 645 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms