RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 LUC7L2Q9Y383 392 aaKnown RBP16.81■□□□□ 0.28
CPSF1-207ENST00000531727 PCDHGA7Q9Y5G6 932 aa16.81■□□□□ 0.28
CPSF1-207ENST00000531727 MGAQ8IWI9 3026 aa16.8■□□□□ 0.28
CPSF1-207ENST00000531727 SCN8AQ9UQD0 1980 aa16.8■□□□□ 0.28
CPSF1-207ENST00000531727 FUCA1P04066 466 aa16.8■□□□□ 0.28
CPSF1-207ENST00000531727 GYPCP04921 128 aa16.8■□□□□ 0.28
CPSF1-207ENST00000531727 CTPS1P17812 591 aa16.8■□□□□ 0.28
CPSF1-207ENST00000531727 GARSP41250 739 aaKnown RBP16.8■□□□□ 0.28
CPSF1-207ENST00000531727 CDK3Q00526 305 aa16.8■□□□□ 0.28
CPSF1-207ENST00000531727 ZFP36L1Q07352 338 aaKnown RBP16.8■□□□□ 0.28
CPSF1-207ENST00000531727 DPTQ07507 201 aa16.8■□□□□ 0.28
CPSF1-207ENST00000531727 GALNT2Q10471 571 aa16.8■□□□□ 0.28
CPSF1-207ENST00000531727 CLN3Q13286 438 aa16.8■□□□□ 0.28
CPSF1-207ENST00000531727 DPYSL3Q14195 570 aa16.8■□□□□ 0.28
CPSF1-207ENST00000531727 PAFAH1B3Q15102 231 aaKnown RBP16.8■□□□□ 0.28
CPSF1-207ENST00000531727 PTPRRQ15256 657 aa16.8■□□□□ 0.28
CPSF1-207ENST00000531727 CCDC122Q5T0U0 273 aa16.8■□□□□ 0.28
CPSF1-207ENST00000531727 RAET1GQ6H3X3 334 aa16.8■□□□□ 0.28
CPSF1-207ENST00000531727 TECPR1Q7Z6L1 1165 aa16.8■□□□□ 0.28
CPSF1-207ENST00000531727 ZNF564Q8TBZ8 553 aaPredicted RBP16.8■□□□□ 0.28
CPSF1-207ENST00000531727 MAML1Q92585 1016 aa16.8■□□□□ 0.28
CPSF1-207ENST00000531727 SEMA3CQ99985 751 aa16.8■□□□□ 0.28
CPSF1-207ENST00000531727 GSDMCQ9BYG8 508 aa16.8■□□□□ 0.28
CPSF1-207ENST00000531727 SUDS3Q9H7L9 328 aaPredicted RBP16.8■□□□□ 0.28
CPSF1-207ENST00000531727 SPATS2LQ9NUQ6 558 aaKnown RBP16.8■□□□□ 0.28
CPSF1-207ENST00000531727 TRNAU1APQ9NX07 287 aaKnown RBP16.8■□□□□ 0.28
CPSF1-207ENST00000531727 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.8■□□□□ 0.28
CPSF1-207ENST00000531727 NENFQ9UMX5 172 aa16.8■□□□□ 0.28
CPSF1-207ENST00000531727 FASNP49327 2511 aaKnown RBP16.8■□□□□ 0.28
CPSF1-207ENST00000531727 ATMQ13315 3056 aa16.8■□□□□ 0.28
CPSF1-207ENST00000531727 KALRNO60229 2985 aa16.8■□□□□ 0.28
CPSF1-207ENST00000531727 GOLGA6CA6NDK9 693 aa16.79■□□□□ 0.28
CPSF1-207ENST00000531727 GOLGA6BA6NDN3 693 aa16.79■□□□□ 0.28
CPSF1-207ENST00000531727 GOLGA6L19H0YKK7 550 aa16.79■□□□□ 0.28
CPSF1-207ENST00000531727 K7ENP7 123 aa16.79■□□□□ 0.28
CPSF1-207ENST00000531727 FZD6O60353 706 aa16.79■□□□□ 0.28
CPSF1-207ENST00000531727 FGF1P05230 155 aa16.79■□□□□ 0.28
CPSF1-207ENST00000531727 PDHA1P08559 390 aa16.79■□□□□ 0.28
CPSF1-207ENST00000531727 JMJD7P0C870 316 aa16.79■□□□□ 0.28
CPSF1-207ENST00000531727 GOLGA6DP0CG33 693 aa16.79■□□□□ 0.28
CPSF1-207ENST00000531727 KRT10P13645 584 aa16.79■□□□□ 0.28
CPSF1-207ENST00000531727 HGFP14210 728 aa16.79■□□□□ 0.28
CPSF1-207ENST00000531727 SLC5A2P31639 672 aa16.79■□□□□ 0.28
CPSF1-207ENST00000531727 GNPDA1P46926 289 aa16.79■□□□□ 0.28
CPSF1-207ENST00000531727 ILF3Q12906 894 aaKnown RBP eCLIP16.79■□□□□ 0.28
CPSF1-207ENST00000531727 TAF1BQ53T94 588 aaPredicted RBP16.79■□□□□ 0.28
CPSF1-207ENST00000531727 NCBP2-AS2Q69YL0 99 aa16.79■□□□□ 0.28
CPSF1-207ENST00000531727 ALG1LQ6GMV1 187 aa16.79■□□□□ 0.28
CPSF1-207ENST00000531727 TIGD7Q6NT04 549 aaPredicted RBP16.79■□□□□ 0.28
CPSF1-207ENST00000531727 INO80CQ6PI98 192 aaPredicted RBP16.79■□□□□ 0.28
CPSF1-207ENST00000531727 C17orf82Q86X59 251 aaPredicted RBP16.79■□□□□ 0.28
CPSF1-207ENST00000531727 NDUFAF2Q8N183 169 aa16.79■□□□□ 0.28
CPSF1-207ENST00000531727 ZNF843Q8N446 348 aa16.79■□□□□ 0.28
CPSF1-207ENST00000531727 ZDHHC1Q8WTX9 485 aa16.79■□□□□ 0.28
CPSF1-207ENST00000531727 TMEM159Q96B96 161 aa16.79■□□□□ 0.28
CPSF1-207ENST00000531727 POLR1EQ9GZS1 481 aaKnown RBP16.79■□□□□ 0.28
CPSF1-207ENST00000531727 GOLGA6AQ9NYA3 693 aa16.79■□□□□ 0.28
CPSF1-207ENST00000531727 TAAR2Q9P1P5 351 aa16.79■□□□□ 0.28
CPSF1-207ENST00000531727 ACSL6Q9UKU0 697 aa16.79■□□□□ 0.28
CPSF1-207ENST00000531727 SUFUQ9UMX1 484 aa16.79■□□□□ 0.28
CPSF1-207ENST00000531727 SLC17A4Q9Y2C5 497 aa16.79■□□□□ 0.28
CPSF1-207ENST00000531727 LOXL2Q9Y4K0 774 aa16.79■□□□□ 0.28
CPSF1-207ENST00000531727 MATN3O15232 486 aa16.78■□□□□ 0.28
CPSF1-207ENST00000531727 IVLP07476 585 aa16.78■□□□□ 0.28
CPSF1-207ENST00000531727 GJC1P36383 396 aa16.78■□□□□ 0.28
CPSF1-207ENST00000531727 MAZP56270 477 aaKnown RBP16.78■□□□□ 0.28
CPSF1-207ENST00000531727 B4GALNT1Q00973 533 aa16.78■□□□□ 0.28
CPSF1-207ENST00000531727 CFHR1Q03591 330 aa16.78■□□□□ 0.28
CPSF1-207ENST00000531727 ITKQ08881 620 aa16.78■□□□□ 0.28
CPSF1-207ENST00000531727 IFI16Q16666 785 aaKnown RBP16.78■□□□□ 0.28
CPSF1-207ENST00000531727 ZSCAN23Q3MJ62 389 aa16.78■□□□□ 0.28
CPSF1-207ENST00000531727 ATP13A4Q4VNC1 1196 aa16.78■□□□□ 0.28
CPSF1-207ENST00000531727 ANKRD20A8PQ5CZ79 823 aa16.78■□□□□ 0.28
CPSF1-207ENST00000531727 LRRC66Q68CR7 880 aa16.78■□□□□ 0.28
CPSF1-207ENST00000531727 CCDC81Q6ZN84 652 aa16.78■□□□□ 0.28
CPSF1-207ENST00000531727 ZNF438Q7Z4V0 828 aa16.78■□□□□ 0.28
CPSF1-207ENST00000531727 CPNE8Q86YQ8 564 aa16.78■□□□□ 0.28
CPSF1-207ENST00000531727 JAMLQ86YT9 394 aa16.78■□□□□ 0.28
CPSF1-207ENST00000531727 SLITRK4Q8IW52 837 aa16.78■□□□□ 0.28
CPSF1-207ENST00000531727 PTCD2Q8WV60 388 aaKnown RBP16.78■□□□□ 0.28
CPSF1-207ENST00000531727 TTC9Q92623 222 aa16.78■□□□□ 0.28
CPSF1-207ENST00000531727 FATE1Q969F0 183 aa16.78■□□□□ 0.28
CPSF1-207ENST00000531727 ZNF670Q9BS34 389 aa16.78■□□□□ 0.28
CPSF1-207ENST00000531727 ABCG8Q9H221 673 aa16.78■□□□□ 0.28
CPSF1-207ENST00000531727 HAUS2Q9NVX0 235 aa16.78■□□□□ 0.28
CPSF1-207ENST00000531727 IFNKQ9P0W0 207 aa16.78■□□□□ 0.28
CPSF1-207ENST00000531727 PISDQ9UG56 409 aa16.78■□□□□ 0.28
CPSF1-207ENST00000531727 AMACRQ9UHK6 382 aa16.78■□□□□ 0.28
CPSF1-207ENST00000531727 ST14Q9Y5Y6 855 aa16.78■□□□□ 0.28
CPSF1-207ENST00000531727 A0A0J9YYE9 177 aa16.77■□□□□ 0.28
CPSF1-207ENST00000531727 A0A0U1RQS6 177 aa16.77■□□□□ 0.28
CPSF1-207ENST00000531727 NVLO15381 856 aaKnown RBP16.77■□□□□ 0.28
CPSF1-207ENST00000531727 PROSCO94903 275 aa16.77■□□□□ 0.28
CPSF1-207ENST00000531727 MAP3K6O95382 1288 aa16.77■□□□□ 0.28
CPSF1-207ENST00000531727 SOD1P00441 154 aa16.77■□□□□ 0.28
CPSF1-207ENST00000531727 TRBC1P01850 177 aa16.77■□□□□ 0.28
CPSF1-207ENST00000531727 ZNF30P17039 623 aa16.77■□□□□ 0.28
CPSF1-207ENST00000531727 CES1P23141 567 aa16.77■□□□□ 0.28
CPSF1-207ENST00000531727 CCNCP24863 283 aa16.77■□□□□ 0.28
CPSF1-207ENST00000531727 AK4P27144 223 aaPredicted RBP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms