RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 ZDHHC17Q8IUH5 632 aa7.4□□□□□ -1.22
CSDE1-213ENST00000530784 ENAHQ8N8S7 591 aaPredicted RBP7.4□□□□□ -1.22
CSDE1-213ENST00000530784 ESR2Q92731 530 aa7.4□□□□□ -1.22
CSDE1-213ENST00000530784 TTC14Q96N46 770 aa7.4□□□□□ -1.22
CSDE1-213ENST00000530784 PDE11AQ9HCR9 933 aa7.4□□□□□ -1.22
CSDE1-213ENST00000530784 ZNF304Q9HCX3 659 aa7.4□□□□□ -1.22
CSDE1-213ENST00000530784 PKP3Q9Y446 797 aa7.4□□□□□ -1.22
CSDE1-213ENST00000530784 CCDC171Q6TFL3 1326 aa7.4□□□□□ -1.22
CSDE1-213ENST00000530784 PRUNE2Q8WUY3 3088 aa7.39□□□□□ -1.23
CSDE1-213ENST00000530784 CUL9Q8IWT3 2517 aa7.39□□□□□ -1.23
CSDE1-213ENST00000530784 NEDD4P46934 1319 aa7.39□□□□□ -1.23
CSDE1-213ENST00000530784 PEX14O75381 377 aa7.39□□□□□ -1.23
CSDE1-213ENST00000530784 CA3P07451 260 aa7.39□□□□□ -1.23
CSDE1-213ENST00000530784 GOLGA8HP0CJ92 632 aa7.39□□□□□ -1.23
CSDE1-213ENST00000530784 HOXB2P14652 356 aa7.39□□□□□ -1.23
CSDE1-213ENST00000530784 MYOGP15173 224 aa7.39□□□□□ -1.23
CSDE1-213ENST00000530784 PRPH2P23942 346 aa7.39□□□□□ -1.23
CSDE1-213ENST00000530784 TBXAS1P24557 533 aaPredicted RBP7.39□□□□□ -1.23
CSDE1-213ENST00000530784 SERPINA4P29622 427 aa7.39□□□□□ -1.23
CSDE1-213ENST00000530784 PCP4P48539 62 aa7.39□□□□□ -1.23
CSDE1-213ENST00000530784 NT5C2P49902 561 aa7.39□□□□□ -1.23
CSDE1-213ENST00000530784 KRT72Q14CN4 511 aa7.39□□□□□ -1.23
CSDE1-213ENST00000530784 CDC37Q16543 378 aaPredicted RBP7.39□□□□□ -1.23
CSDE1-213ENST00000530784 ENTPD8Q5MY95 495 aa7.39□□□□□ -1.23
CSDE1-213ENST00000530784 GPATCH4Q5T3I0 446 aaKnown RBP7.39□□□□□ -1.23
CSDE1-213ENST00000530784 SLC30A9Q6PML9 568 aa7.39□□□□□ -1.23
CSDE1-213ENST00000530784 ANKS1BQ7Z6G8 1248 aa7.39□□□□□ -1.23
CSDE1-213ENST00000530784 TBC1D10CQ8IV04 446 aa7.39□□□□□ -1.23
CSDE1-213ENST00000530784 ENDOVQ8N8Q3 282 aaKnown RBP7.39□□□□□ -1.23
CSDE1-213ENST00000530784 SLC2A12Q8TD20 617 aa7.39□□□□□ -1.23
CSDE1-213ENST00000530784 RILPL2Q969X0 211 aa7.39□□□□□ -1.23
CSDE1-213ENST00000530784 ZNF419Q96HQ0 510 aaPredicted RBP7.39□□□□□ -1.23
CSDE1-213ENST00000530784 HDHD5Q9BXW7 423 aa7.39□□□□□ -1.23
CSDE1-213ENST00000530784 MAGEH1Q9H213 219 aa7.39□□□□□ -1.23
CSDE1-213ENST00000530784 ARL15Q9NXU5 204 aa7.39□□□□□ -1.23
CSDE1-213ENST00000530784 GRHPRQ9UBQ7 328 aa7.39□□□□□ -1.23
CSDE1-213ENST00000530784 MCM3APO60318 1980 aa7.39□□□□□ -1.23
CSDE1-213ENST00000530784 LCTP09848 1927 aa7.39□□□□□ -1.23
CSDE1-213ENST00000530784 VCANP13611 3396 aa7.38□□□□□ -1.23
CSDE1-213ENST00000530784 ABCB11O95342 1321 aa7.38□□□□□ -1.23
CSDE1-213ENST00000530784 IFNA2P01563 188 aa7.38□□□□□ -1.23
CSDE1-213ENST00000530784 IQCF3P0C7M6 154 aa7.38□□□□□ -1.23
CSDE1-213ENST00000530784 P2RX3P56373 397 aa7.38□□□□□ -1.23
CSDE1-213ENST00000530784 RHAGQ02094 409 aa7.38□□□□□ -1.23
CSDE1-213ENST00000530784 TANGO2Q6ICL3 276 aa7.38□□□□□ -1.23
CSDE1-213ENST00000530784 KDELC2Q7Z4H8 507 aa7.38□□□□□ -1.23
CSDE1-213ENST00000530784 IQCA1Q86XH1 822 aa7.38□□□□□ -1.23
CSDE1-213ENST00000530784 TMEM217Q8N7C4 229 aa7.38□□□□□ -1.23
CSDE1-213ENST00000530784 PHOSPHO2Q8TCD6 241 aa7.38□□□□□ -1.23
CSDE1-213ENST00000530784 ASB5Q8WWX0 329 aa7.38□□□□□ -1.23
CSDE1-213ENST00000530784 INPP5DQ92835 1189 aa7.38□□□□□ -1.23
CSDE1-213ENST00000530784 TRAPPC9Q96Q05 1148 aa7.38□□□□□ -1.23
CSDE1-213ENST00000530784 FRMD8Q9BZ67 464 aaPredicted RBP7.38□□□□□ -1.23
CSDE1-213ENST00000530784 FTOQ9C0B1 505 aaKnown RBP eCLIP7.38□□□□□ -1.23
CSDE1-213ENST00000530784 MAF1Q9H063 256 aa7.38□□□□□ -1.23
CSDE1-213ENST00000530784 KAT14Q9H8E8 782 aa7.38□□□□□ -1.23
CSDE1-213ENST00000530784 MAP6D1Q9H9H5 199 aa7.38□□□□□ -1.23
CSDE1-213ENST00000530784 NDUFAF4Q9P032 175 aa7.38□□□□□ -1.23
CSDE1-213ENST00000530784 KCND3Q9UK17 655 aa7.38□□□□□ -1.23
CSDE1-213ENST00000530784 SPTBN5Q9NRC6 3674 aaKnown RBP7.37□□□□□ -1.23
CSDE1-213ENST00000530784 TCRBV7S3A2A0A539 114 aa7.37□□□□□ -1.23
CSDE1-213ENST00000530784 DHX16O60231 1041 aaKnown RBP7.37□□□□□ -1.23
CSDE1-213ENST00000530784 BAIAP3O94812 1187 aa7.37□□□□□ -1.23
CSDE1-213ENST00000530784 GH1P01241 217 aa7.37□□□□□ -1.23
CSDE1-213ENST00000530784 LCKP06239 509 aa7.37□□□□□ -1.23
CSDE1-213ENST00000530784 MMP3P08254 477 aa7.37□□□□□ -1.23
CSDE1-213ENST00000530784 STAT1P42224 750 aa7.37□□□□□ -1.23
CSDE1-213ENST00000530784 HTR6P50406 440 aa7.37□□□□□ -1.23
CSDE1-213ENST00000530784 CDK18Q07002 472 aa7.37□□□□□ -1.23
CSDE1-213ENST00000530784 RAPGEF1Q13905 1077 aa7.37□□□□□ -1.23
CSDE1-213ENST00000530784 PTGISQ16647 500 aa7.37□□□□□ -1.23
CSDE1-213ENST00000530784 TUBB8Q3ZCM7 444 aa7.37□□□□□ -1.23
CSDE1-213ENST00000530784 ASPRV1Q53RT3 343 aa7.37□□□□□ -1.23
CSDE1-213ENST00000530784 DGAT2L7PQ6IED9 249 aa7.37□□□□□ -1.23
CSDE1-213ENST00000530784 SEPT14Q6ZU15 432 aa7.37□□□□□ -1.23
CSDE1-213ENST00000530784 HERC6Q8IVU3 1022 aa7.37□□□□□ -1.23
CSDE1-213ENST00000530784 AFG1LQ8WV93 481 aa7.37□□□□□ -1.23
CSDE1-213ENST00000530784 ARRDC3Q96B67 414 aa7.37□□□□□ -1.23
CSDE1-213ENST00000530784 DDX23Q9BUQ8 820 aaKnown RBP7.37□□□□□ -1.23
CSDE1-213ENST00000530784 UBA5Q9GZZ9 404 aa7.37□□□□□ -1.23
CSDE1-213ENST00000530784 CPVLQ9H3G5 476 aa7.37□□□□□ -1.23
CSDE1-213ENST00000530784 TASP1Q9H6P5 420 aa7.37□□□□□ -1.23
CSDE1-213ENST00000530784 DIAPH3Q9NSV4 1193 aa7.37□□□□□ -1.23
CSDE1-213ENST00000530784 BAG5Q9UL15 447 aa7.37□□□□□ -1.23
CSDE1-213ENST00000530784 TANC1Q9C0D5 1861 aa7.36□□□□□ -1.23
CSDE1-213ENST00000530784 MDM4O15151 490 aa7.36□□□□□ -1.23
CSDE1-213ENST00000530784 LDHAP00338 332 aaKnown RBP7.36□□□□□ -1.23
CSDE1-213ENST00000530784 HOXB9P17482 250 aaPredicted RBP7.36□□□□□ -1.23
CSDE1-213ENST00000530784 CASTP20810 708 aaKnown RBP7.36□□□□□ -1.23
CSDE1-213ENST00000530784 ARHGAP1Q07960 439 aa7.36□□□□□ -1.23
CSDE1-213ENST00000530784 FOXO1Q12778 655 aa7.36□□□□□ -1.23
CSDE1-213ENST00000530784 STXBP2Q15833 593 aa7.36□□□□□ -1.23
CSDE1-213ENST00000530784 IMMTQ16891 758 aaKnown RBP7.36□□□□□ -1.23
CSDE1-213ENST00000530784 QRICH1Q2TAL8 776 aa7.36□□□□□ -1.23
CSDE1-213ENST00000530784 ALG10Q5BKT4 473 aa7.36□□□□□ -1.23
CSDE1-213ENST00000530784 ALG10BQ5I7T1 473 aa7.36□□□□□ -1.23
CSDE1-213ENST00000530784 ARHGEF16Q5VV41 709 aa7.36□□□□□ -1.23
CSDE1-213ENST00000530784 MTFR2Q6P444 385 aa7.36□□□□□ -1.23
CSDE1-213ENST00000530784 CWC27Q6UX04 472 aaKnown RBP7.36□□□□□ -1.23
CSDE1-213ENST00000530784 LRRC8DQ7L1W4 858 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms