RNA–Protein interactions for RNA: ENST00000529898.1

CTR9-205, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-205ENST00000529898 FAF1Q9UNN5 650 aaPredicted RBP4.06□□□□□ -1.76
CTR9-205ENST00000529898 ERVK-11Q9UQG0 969 aa4.06□□□□□ -1.76
CTR9-205ENST00000529898 STK38LQ9Y2H1 464 aa4.06□□□□□ -1.76
CTR9-205ENST00000529898 MTF2Q9Y483 593 aaPredicted RBP4.06□□□□□ -1.76
CTR9-205ENST00000529898 AFG3L2Q9Y4W6 797 aa4.06□□□□□ -1.76
CTR9-205ENST00000529898 EID1Q9Y6B2 187 aa4.06□□□□□ -1.76
CTR9-205ENST00000529898 MARF1Q9Y4F3 1742 aaKnown RBP4.06□□□□□ -1.76
CTR9-205ENST00000529898 RGS12O14924 1447 aa4.05□□□□□ -1.76
CTR9-205ENST00000529898 PNPLA6Q8IY17 1366 aa4.05□□□□□ -1.76
CTR9-205ENST00000529898 ABCC12Q96J65 1359 aa4.05□□□□□ -1.76
CTR9-205ENST00000529898 MAP3K15Q6ZN16 1313 aa4.05□□□□□ -1.76
CTR9-205ENST00000529898 A0A0G2JPF8 293 aa4.05□□□□□ -1.76
CTR9-205ENST00000529898 A0A1B0GWJ7 208 aa4.05□□□□□ -1.76
CTR9-205ENST00000529898 GMNCA6NCL1 334 aa4.05□□□□□ -1.76
CTR9-205ENST00000529898 EFCAB10A6NFE3 127 aa4.05□□□□□ -1.76
CTR9-205ENST00000529898 SLC9B1P1A6NJY1 282 aa4.05□□□□□ -1.76
CTR9-205ENST00000529898 CCT8L1PA6NM43 557 aa4.05□□□□□ -1.76
CTR9-205ENST00000529898 HNRNPCL3B7ZW38 293 aa4.05□□□□□ -1.76
CTR9-205ENST00000529898 DCLK1O15075 740 aa4.05□□□□□ -1.76
CTR9-205ENST00000529898 POLR1CO15160 346 aaPredicted RBP4.05□□□□□ -1.76
CTR9-205ENST00000529898 ECE2O60344 883 aa4.05□□□□□ -1.76
CTR9-205ENST00000529898 CLN5O75503 358 aa4.05□□□□□ -1.76
CTR9-205ENST00000529898 USP1O94782 785 aa4.05□□□□□ -1.76
CTR9-205ENST00000529898 ONECUT2O95948 504 aa4.05□□□□□ -1.76
CTR9-205ENST00000529898 AHSGP02765 367 aa4.05□□□□□ -1.76
CTR9-205ENST00000529898 HNRNPCL4P0DMR1 293 aa4.05□□□□□ -1.76
CTR9-205ENST00000529898 ATP6V1B1P15313 513 aa4.05□□□□□ -1.76
CTR9-205ENST00000529898 NQO1P15559 274 aaKnown RBP4.05□□□□□ -1.76
CTR9-205ENST00000529898 ITGAXP20702 1163 aa4.05□□□□□ -1.76
CTR9-205ENST00000529898 JAK1P23458 1154 aa4.05□□□□□ -1.76
CTR9-205ENST00000529898 TNFRSF8P28908 595 aa4.05□□□□□ -1.76
CTR9-205ENST00000529898 PPIFP30405 207 aaKnown RBP4.05□□□□□ -1.76
CTR9-205ENST00000529898 MDH1P40925 334 aaKnown RBP4.05□□□□□ -1.76
CTR9-205ENST00000529898 VPS41P49754 854 aa4.05□□□□□ -1.76
CTR9-205ENST00000529898 CDK7P50613 346 aa4.05□□□□□ -1.76
CTR9-205ENST00000529898 BCAP31P51572 246 aa4.05□□□□□ -1.76
CTR9-205ENST00000529898 ZNF134P52741 427 aa4.05□□□□□ -1.76
CTR9-205ENST00000529898 ARFIP2P53365 341 aa4.05□□□□□ -1.76
CTR9-205ENST00000529898 RPS3AP61247 264 aaKnown RBP4.05□□□□□ -1.76
CTR9-205ENST00000529898 UBE2IP63279 158 aaKnown RBP4.05□□□□□ -1.76
CTR9-205ENST00000529898 PPP2R2BQ00005 443 aa4.05□□□□□ -1.76
CTR9-205ENST00000529898 ECT2LQ008S8 904 aa4.05□□□□□ -1.76
CTR9-205ENST00000529898 ZNF33BQ06732 778 aa4.05□□□□□ -1.76
CTR9-205ENST00000529898 ENPEPQ07075 957 aa4.05□□□□□ -1.76
CTR9-205ENST00000529898 LGALS3BPQ08380 585 aa4.05□□□□□ -1.76
CTR9-205ENST00000529898 FCHO2Q0JRZ9 810 aa4.05□□□□□ -1.76
CTR9-205ENST00000529898 AIMP1Q12904 312 aaKnown RBP4.05□□□□□ -1.76
CTR9-205ENST00000529898 PLS1Q14651 629 aa4.05□□□□□ -1.76
CTR9-205ENST00000529898 CYTH1Q15438 398 aa4.05□□□□□ -1.76
CTR9-205ENST00000529898 EZH2Q15910 746 aaKnown RBP4.05□□□□□ -1.76
CTR9-205ENST00000529898 PHKG1Q16816 387 aa4.05□□□□□ -1.76
CTR9-205ENST00000529898 PARP6Q2NL67 630 aa4.05□□□□□ -1.76
CTR9-205ENST00000529898 SETMARQ53H47 684 aaPredicted RBP4.05□□□□□ -1.76
CTR9-205ENST00000529898 IGSF11Q5DX21 431 aa4.05□□□□□ -1.76
CTR9-205ENST00000529898 FAM76BQ5HYJ3 339 aa4.05□□□□□ -1.76
CTR9-205ENST00000529898 WASHC2DQ5SRD0 308 aa4.05□□□□□ -1.76
CTR9-205ENST00000529898 TTC39AQ5SRH9 613 aa4.05□□□□□ -1.76
CTR9-205ENST00000529898 C6orf10Q5SRN2 563 aa4.05□□□□□ -1.76
CTR9-205ENST00000529898 RNF220Q5VTB9 566 aa4.05□□□□□ -1.76
CTR9-205ENST00000529898 SUMO4Q6EEV6 95 aa4.05□□□□□ -1.76
CTR9-205ENST00000529898 FAM109BQ6ICB4 259 aaPredicted RBP4.05□□□□□ -1.76
CTR9-205ENST00000529898 SPOPLQ6IQ16 392 aa4.05□□□□□ -1.76
CTR9-205ENST00000529898 EMBQ6PCB8 327 aa4.05□□□□□ -1.76
CTR9-205ENST00000529898 C11orf88Q6PI97 169 aa4.05□□□□□ -1.76
CTR9-205ENST00000529898 OLFM4Q6UX06 510 aa4.05□□□□□ -1.76
CTR9-205ENST00000529898 PLEKHM3Q6ZWE6 761 aa4.05□□□□□ -1.76
CTR9-205ENST00000529898 CYP4V2Q6ZWL3 525 aaPredicted RBP4.05□□□□□ -1.76
CTR9-205ENST00000529898 MARK2Q7KZI7 788 aaKnown RBP4.05□□□□□ -1.76
CTR9-205ENST00000529898 KCTD20Q7Z5Y7 419 aa4.05□□□□□ -1.76
CTR9-205ENST00000529898 ZER1Q7Z7L7 766 aa4.05□□□□□ -1.76
CTR9-205ENST00000529898 DPP9Q86TI2 863 aa4.05□□□□□ -1.76
CTR9-205ENST00000529898 MB21D2Q8IYB1 491 aaPredicted RBP4.05□□□□□ -1.76
CTR9-205ENST00000529898 DIS3L2Q8IYB7 885 aaKnown RBP4.05□□□□□ -1.76
CTR9-205ENST00000529898 NATD1Q8N6N6 113 aa4.05□□□□□ -1.76
CTR9-205ENST00000529898 TTLQ8NG68 377 aa4.05□□□□□ -1.76
CTR9-205ENST00000529898 OR6C4Q8NGE1 309 aa4.05□□□□□ -1.76
CTR9-205ENST00000529898 CDC26Q8NHZ8 85 aa4.05□□□□□ -1.76
CTR9-205ENST00000529898 FANK1Q8TC84 345 aa4.05□□□□□ -1.76
CTR9-205ENST00000529898 SCARB1Q8WTV0 552 aa4.05□□□□□ -1.76
CTR9-205ENST00000529898 NAT14Q8WUY8 206 aa4.05□□□□□ -1.76
CTR9-205ENST00000529898 SMG7Q92540 1137 aaKnown RBP4.05□□□□□ -1.76
CTR9-205ENST00000529898 CCDC127Q96BQ5 260 aa4.05□□□□□ -1.76
CTR9-205ENST00000529898 MVB12AQ96EY5 273 aa4.05□□□□□ -1.76
CTR9-205ENST00000529898 RMND5BQ96G75 393 aaPredicted RBP4.05□□□□□ -1.76
CTR9-205ENST00000529898 LRGUKQ96M69 825 aa4.05□□□□□ -1.76
CTR9-205ENST00000529898 TSNARE1Q96NA8 513 aa4.05□□□□□ -1.76
CTR9-205ENST00000529898 BIRC8Q96P09 236 aa4.05□□□□□ -1.76
CTR9-205ENST00000529898 VPS35Q96QK1 796 aa4.05□□□□□ -1.76
CTR9-205ENST00000529898 MYD88Q99836 296 aa4.05□□□□□ -1.76
CTR9-205ENST00000529898 PTDSS2Q9BVG9 487 aa4.05□□□□□ -1.76
CTR9-205ENST00000529898 GON7Q9BXV9 100 aa4.05□□□□□ -1.76
CTR9-205ENST00000529898 MTMR12Q9C0I1 747 aa4.05□□□□□ -1.76
CTR9-205ENST00000529898 NUP62CLQ9H1M0 184 aa4.05□□□□□ -1.76
CTR9-205ENST00000529898 SLC12A5Q9H2X9 1139 aa4.05□□□□□ -1.76
CTR9-205ENST00000529898 SNX25Q9H3E2 840 aa4.05□□□□□ -1.76
CTR9-205ENST00000529898 PLEKHA4Q9H4M7 779 aa4.05□□□□□ -1.76
CTR9-205ENST00000529898 SP140LQ9H930 580 aa4.05□□□□□ -1.76
CTR9-205ENST00000529898 RNPEPL1Q9HAU8 725 aa4.05□□□□□ -1.76
CTR9-205ENST00000529898 PAG1Q9NWQ8 432 aa4.05□□□□□ -1.76
CTR9-205ENST00000529898 HPF1Q9NWY4 346 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms