RNA–Protein interactions for RNA: ENST00000522115.6

PTPN12-215, Transcript of protein tyrosine phosphatase, non-receptor type 12, human

TSL 5

Gene PTPN12, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN12-215	ENST00000522115	GPR108	Q9NPR9	543 aa		4.21	□□□□□ -1.74
PTPN12-215	ENST00000522115	KLHL1	Q9NR64	748 aa		4.21	□□□□□ -1.74
PTPN12-215	ENST00000522115	SLC6A13	Q9NSD5	602 aa		4.21	□□□□□ -1.74
PTPN12-215	ENST00000522115	TMEM30A	Q9NV96	361 aa		4.21	□□□□□ -1.74
PTPN12-215	ENST00000522115	NPIPB15	A6NHN6	443 aa	Predicted RBP	4.2	□□□□□ -1.74
PTPN12-215	ENST00000522115	BMPR1B	O00238	502 aa		4.2	□□□□□ -1.74
PTPN12-215	ENST00000522115	ZNF432	O94892	652 aa		4.2	□□□□□ -1.74
PTPN12-215	ENST00000522115	G6PD	P11413	515 aa		4.2	□□□□□ -1.74
PTPN12-215	ENST00000522115	UBL4A	P11441	157 aa		4.2	□□□□□ -1.74
PTPN12-215	ENST00000522115	DGKA	P23743	735 aa		4.2	□□□□□ -1.74
PTPN12-215	ENST00000522115	PIP4K2A	P48426	406 aa	Predicted RBP	4.2	□□□□□ -1.74
PTPN12-215	ENST00000522115	CTCF	P49711	727 aa	Predicted RBP	4.2	□□□□□ -1.74
PTPN12-215	ENST00000522115	RPL7A	P62424	266 aa	Known RBP	4.2	□□□□□ -1.74
PTPN12-215	ENST00000522115	SORD	Q00796	357 aa		4.2	□□□□□ -1.74
PTPN12-215	ENST00000522115	DRAP1	Q14919	205 aa	Predicted RBP	4.2	□□□□□ -1.74
PTPN12-215	ENST00000522115	CCNG2	Q16589	344 aa		4.2	□□□□□ -1.74
PTPN12-215	ENST00000522115	HSP90AB4P	Q58FF6	505 aa		4.2	□□□□□ -1.74
PTPN12-215	ENST00000522115	SLC45A4	Q5BKX6	768 aa		4.2	□□□□□ -1.74
PTPN12-215	ENST00000522115	SLC36A4	Q6YBV0	504 aa		4.2	□□□□□ -1.74
PTPN12-215	ENST00000522115	MMS22L	Q6ZRQ5	1243 aa		4.2	□□□□□ -1.74
PTPN12-215	ENST00000522115	POC1A	Q8NBT0	407 aa		4.2	□□□□□ -1.74
PTPN12-215	ENST00000522115	KCNH5	Q8NCM2	988 aa		4.2	□□□□□ -1.74
PTPN12-215	ENST00000522115	PSPC1	Q8WXF1	523 aa	Known RBP	4.2	□□□□□ -1.74
PTPN12-215	ENST00000522115	RND1	Q92730	232 aa		4.2	□□□□□ -1.74
PTPN12-215	ENST00000522115	SEC62	Q99442	399 aa	Known RBP	4.2	□□□□□ -1.74
PTPN12-215	ENST00000522115	TMEM47	Q9BQJ4	181 aa		4.2	□□□□□ -1.74
PTPN12-215	ENST00000522115	NDST4	Q9H3R1	872 aa		4.2	□□□□□ -1.74
PTPN12-215	ENST00000522115	TTC7A	Q9ULT0	858 aa	Predicted RBP	4.2	□□□□□ -1.74
PTPN12-215	ENST00000522115	CAPN7	Q9Y6W3	813 aa		4.2	□□□□□ -1.74
PTPN12-215	ENST00000522115	LILRA5	A6NI73	299 aa		4.19	□□□□□ -1.74
PTPN12-215	ENST00000522115	NPHP1	O15259	732 aa		4.19	□□□□□ -1.74
PTPN12-215	ENST00000522115	TGFB1I1	O43294	461 aa		4.19	□□□□□ -1.74
PTPN12-215	ENST00000522115	PAGE4	O60829	102 aa		4.19	□□□□□ -1.74
PTPN12-215	ENST00000522115	AGR2	O95994	175 aa		4.19	□□□□□ -1.74
PTPN12-215	ENST00000522115	S1PR1	P21453	382 aa		4.19	□□□□□ -1.74
PTPN12-215	ENST00000522115	USP8	P40818	1118 aa		4.19	□□□□□ -1.74
PTPN12-215	ENST00000522115	CASP6	P55212	293 aa		4.19	□□□□□ -1.74
PTPN12-215	ENST00000522115	CXorf66	Q5JRM2	361 aa	Predicted RBP	4.19	□□□□□ -1.74
PTPN12-215	ENST00000522115	KCNT1	Q5JUK3	1230 aa		4.19	□□□□□ -1.74
PTPN12-215	ENST00000522115	HIST2H2BC	Q6DN03	193 aa		4.19	□□□□□ -1.74
PTPN12-215	ENST00000522115	HIST2H2BD	Q6DRA6	164 aa		4.19	□□□□□ -1.74
PTPN12-215	ENST00000522115	GFRAL	Q6UXV0	394 aa		4.19	□□□□□ -1.74
PTPN12-215	ENST00000522115	FOXL2NB	Q6ZUU3	175 aa		4.19	□□□□□ -1.74
PTPN12-215	ENST00000522115	C9orf139	Q6ZV77	190 aa		4.19	□□□□□ -1.74
PTPN12-215	ENST00000522115	CACNA2D4	Q7Z3S7	1137 aa		4.19	□□□□□ -1.74
PTPN12-215	ENST00000522115	SFR1	Q86XK3	245 aa		4.19	□□□□□ -1.74
PTPN12-215	ENST00000522115	C1orf87	Q8N0U7	546 aa		4.19	□□□□□ -1.74
PTPN12-215	ENST00000522115	MUC20	Q8N307	709 aa	Predicted RBP	4.19	□□□□□ -1.74
PTPN12-215	ENST00000522115	PCYOX1L	Q8NBM8	494 aa		4.19	□□□□□ -1.74
PTPN12-215	ENST00000522115	METTL6	Q8TCB7	284 aa		4.19	□□□□□ -1.74
PTPN12-215	ENST00000522115	SECTM1	Q8WVN6	248 aa		4.19	□□□□□ -1.74
PTPN12-215	ENST00000522115	GTF3C6	Q969F1	213 aa		4.19	□□□□□ -1.74
PTPN12-215	ENST00000522115	FAM149B1	Q96BN6	582 aa		4.19	□□□□□ -1.74
PTPN12-215	ENST00000522115	FEM1C	Q96JP0	617 aa		4.19	□□□□□ -1.74
PTPN12-215	ENST00000522115	PPP1R13B	Q96KQ4	1090 aa		4.19	□□□□□ -1.74
PTPN12-215	ENST00000522115	EIF2AK1	Q9BQI3	630 aa	Known RBP	4.19	□□□□□ -1.74
PTPN12-215	ENST00000522115	C1QTNF5	Q9BXJ0	243 aa		4.19	□□□□□ -1.74
PTPN12-215	ENST00000522115	USP44	Q9H0E7	712 aa		4.19	□□□□□ -1.74
PTPN12-215	ENST00000522115	PLEKHA5	Q9HAU0	1116 aa		4.19	□□□□□ -1.74
PTPN12-215	ENST00000522115	ACSL5	Q9ULC5	683 aa		4.19	□□□□□ -1.74
PTPN12-215	ENST00000522115	AMDHD2	Q9Y303	409 aa		4.19	□□□□□ -1.74
PTPN12-215	ENST00000522115		A0A0G2JPF8	293 aa		4.18	□□□□□ -1.74
PTPN12-215	ENST00000522115	HNRNPCL3	B7ZW38	293 aa		4.18	□□□□□ -1.74
PTPN12-215	ENST00000522115	CREB3	O43889	395 aa		4.18	□□□□□ -1.74
PTPN12-215	ENST00000522115	HNRNPCL1	O60812	293 aa	Known RBP	4.18	□□□□□ -1.74
PTPN12-215	ENST00000522115	HNRNPCL4	P0DMR1	293 aa		4.18	□□□□□ -1.74
PTPN12-215	ENST00000522115	BDKRB2	P30411	391 aa		4.18	□□□□□ -1.74
PTPN12-215	ENST00000522115	HOXC9	P31274	260 aa		4.18	□□□□□ -1.74
PTPN12-215	ENST00000522115	BSG	P35613	385 aa		4.18	□□□□□ -1.74
PTPN12-215	ENST00000522115	DDIT3	P35638	169 aa		4.18	□□□□□ -1.74
PTPN12-215	ENST00000522115	HARS2	P49590	506 aa	Known RBP	4.18	□□□□□ -1.74
PTPN12-215	ENST00000522115	NLRP5	P59047	1200 aa		4.18	□□□□□ -1.74
PTPN12-215	ENST00000522115	OLR1	P78380	273 aa		4.18	□□□□□ -1.74
PTPN12-215	ENST00000522115	HYAL1	Q12794	435 aa		4.18	□□□□□ -1.74
PTPN12-215	ENST00000522115	SYT16	Q17RD7	645 aa		4.18	□□□□□ -1.74
PTPN12-215	ENST00000522115	COL28A1	Q2UY09	1125 aa		4.18	□□□□□ -1.74
PTPN12-215	ENST00000522115	SOWAHC	Q53LP3	525 aa	Predicted RBP	4.18	□□□□□ -1.74
PTPN12-215	ENST00000522115	SIGIRR	Q6IA17	410 aa		4.18	□□□□□ -1.74
PTPN12-215	ENST00000522115	BRAT1	Q6PJG6	821 aa		4.18	□□□□□ -1.74
PTPN12-215	ENST00000522115	GSTA5	Q7RTV2	222 aa		4.18	□□□□□ -1.74
PTPN12-215	ENST00000522115	R3HCC1L	Q7Z5L2	792 aa	Known RBP	4.18	□□□□□ -1.74
PTPN12-215	ENST00000522115	SMIM29	Q86T20	159 aa		4.18	□□□□□ -1.74
PTPN12-215	ENST00000522115	OR2AK2	Q8NG84	335 aa		4.18	□□□□□ -1.74
PTPN12-215	ENST00000522115	SPATA20	Q8TB22	786 aa		4.18	□□□□□ -1.74
PTPN12-215	ENST00000522115	ABTB1	Q969K4	478 aa	Predicted RBP	4.18	□□□□□ -1.74
PTPN12-215	ENST00000522115	TMEM68	Q96MH6	324 aa		4.18	□□□□□ -1.74
PTPN12-215	ENST00000522115	PIP5K1A	Q99755	562 aa		4.18	□□□□□ -1.74
PTPN12-215	ENST00000522115	VPS33B	Q9H267	617 aa		4.18	□□□□□ -1.74
PTPN12-215	ENST00000522115	UNC45A	Q9H3U1	944 aa		4.18	□□□□□ -1.74
PTPN12-215	ENST00000522115	DONSON	Q9NYP3	566 aa		4.18	□□□□□ -1.74
PTPN12-215	ENST00000522115	CAMK2A	Q9UQM7	478 aa		4.18	□□□□□ -1.74
PTPN12-215	ENST00000522115	FAM237A	A0A1B0GTK4	181 aa		4.17	□□□□□ -1.74
PTPN12-215	ENST00000522115		A0A1W2PPH5	198 aa		4.17	□□□□□ -1.74
PTPN12-215	ENST00000522115		A0A1W2PS18	150 aa		4.17	□□□□□ -1.74
PTPN12-215	ENST00000522115	HLA-DOB	P13765	273 aa		4.17	□□□□□ -1.74
PTPN12-215	ENST00000522115	ZNF182	P17025	639 aa	Predicted RBP	4.17	□□□□□ -1.74
PTPN12-215	ENST00000522115	AMD1	P17707	334 aa		4.17	□□□□□ -1.74
PTPN12-215	ENST00000522115	PSMA4	P25789	261 aa	Known RBP	4.17	□□□□□ -1.74
PTPN12-215	ENST00000522115	ELF1	P32519	619 aa		4.17	□□□□□ -1.74
PTPN12-215	ENST00000522115	ICAM3	P32942	547 aa		4.17	□□□□□ -1.74

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