RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 GULP1Q9UBP9 304 aa17.03■□□□□ 0.32
SQLE-205ENST00000521232 DNPEPQ9ULA0 475 aa17.03■□□□□ 0.32
SQLE-205ENST00000521232 GPR34Q9UPC5 381 aa17.03■□□□□ 0.32
SQLE-205ENST00000521232 PCDHB1Q9Y5F3 818 aa17.03■□□□□ 0.32
SQLE-205ENST00000521232 PCDHA13Q9Y5I0 950 aa17.03■□□□□ 0.32
SQLE-205ENST00000521232 ALG6Q9Y672 507 aa17.03■□□□□ 0.32
SQLE-205ENST00000521232 COL27A1Q8IZC6 1860 aaPredicted RBP17.03■□□□□ 0.32
SQLE-205ENST00000521232 A0A087WV48 116 aa17.02■□□□□ 0.32
SQLE-205ENST00000521232 A0A0U1RQS6 177 aa17.02■□□□□ 0.32
SQLE-205ENST00000521232 PRSS38A1L453 326 aa17.02■□□□□ 0.32
SQLE-205ENST00000521232 SPOPO43791 374 aa17.02■□□□□ 0.32
SQLE-205ENST00000521232 CSO75390 466 aaKnown RBP17.02■□□□□ 0.32
SQLE-205ENST00000521232 TCEA3O75764 348 aa17.02■□□□□ 0.32
SQLE-205ENST00000521232 CEACAM5P06731 702 aa17.02■□□□□ 0.32
SQLE-205ENST00000521232 NOP2P46087 812 aaKnown RBP17.02■□□□□ 0.32
SQLE-205ENST00000521232 SKOR1P84550 965 aa17.02■□□□□ 0.32
SQLE-205ENST00000521232 CDK3Q00526 305 aa17.02■□□□□ 0.32
SQLE-205ENST00000521232 AP1B1Q10567 949 aa17.02■□□□□ 0.32
SQLE-205ENST00000521232 ZBTB17Q13105 803 aa17.02■□□□□ 0.32
SQLE-205ENST00000521232 TCEA2Q15560 299 aa17.02■□□□□ 0.32
SQLE-205ENST00000521232 ISXQ2M1V0 245 aa17.02■□□□□ 0.32
SQLE-205ENST00000521232 MFSD7Q6UXD7 560 aa17.02■□□□□ 0.32
SQLE-205ENST00000521232 NPNTQ6UXI9 565 aa17.02■□□□□ 0.32
SQLE-205ENST00000521232 RFLNAQ6ZTI6 216 aa17.02■□□□□ 0.32
SQLE-205ENST00000521232 RFX6Q8HWS3 928 aa17.02■□□□□ 0.32
SQLE-205ENST00000521232 GPR156Q8NFN8 814 aa17.02■□□□□ 0.32
SQLE-205ENST00000521232 OR6C4Q8NGE1 309 aa17.02■□□□□ 0.32
SQLE-205ENST00000521232 WDR48Q8TAF3 677 aa17.02■□□□□ 0.32
SQLE-205ENST00000521232 GRAMD1AQ96CP6 724 aa17.02■□□□□ 0.32
SQLE-205ENST00000521232 MRFAP1L1Q96HT8 127 aa17.02■□□□□ 0.32
SQLE-205ENST00000521232 FRMD8Q9BZ67 464 aaPredicted RBP17.02■□□□□ 0.32
SQLE-205ENST00000521232 BRD8Q9H0E9 1235 aa17.02■□□□□ 0.32
SQLE-205ENST00000521232 TMEM168Q9H0V1 697 aa17.02■□□□□ 0.32
SQLE-205ENST00000521232 ABCG8Q9H221 673 aa17.02■□□□□ 0.32
SQLE-205ENST00000521232 UNC13CQ8NB66 2214 aa17.02■□□□□ 0.32
SQLE-205ENST00000521232 A0A0A6YYK5 440 aaPredicted RBP17.01■□□□□ 0.31
SQLE-205ENST00000521232 CAPN8A6NHC0 703 aa17.01■□□□□ 0.31
SQLE-205ENST00000521232 ANKRD66B4E2M5 251 aa17.01■□□□□ 0.31
SQLE-205ENST00000521232 PPP1R12AO14974 1030 aaPredicted RBP17.01■□□□□ 0.31
SQLE-205ENST00000521232 PSTPIP1O43586 416 aa17.01■□□□□ 0.31
SQLE-205ENST00000521232 FUCA1P04066 466 aa17.01■□□□□ 0.31
SQLE-205ENST00000521232 TNNT1P13805 278 aa17.01■□□□□ 0.31
SQLE-205ENST00000521232 CD86P42081 329 aa17.01■□□□□ 0.31
SQLE-205ENST00000521232 CDKN2BP42772 138 aa17.01■□□□□ 0.31
SQLE-205ENST00000521232 ZNF75DP51815 510 aa17.01■□□□□ 0.31
SQLE-205ENST00000521232 STC1P52823 247 aa17.01■□□□□ 0.31
SQLE-205ENST00000521232 RAET1GQ6H3X3 334 aa17.01■□□□□ 0.31
SQLE-205ENST00000521232 ZNF765Q7L2R6 523 aa17.01■□□□□ 0.31
SQLE-205ENST00000521232 TAF8Q7Z7C8 310 aa17.01■□□□□ 0.31
SQLE-205ENST00000521232 NRSN1Q8IZ57 195 aa17.01■□□□□ 0.31
SQLE-205ENST00000521232 KYQ8NBH2 561 aa17.01■□□□□ 0.31
SQLE-205ENST00000521232 AP2M1Q96CW1 435 aa17.01■□□□□ 0.31
SQLE-205ENST00000521232 PANX2Q96RD6 677 aa17.01■□□□□ 0.31
SQLE-205ENST00000521232 CCDC3Q9BQI4 270 aa17.01■□□□□ 0.31
SQLE-205ENST00000521232 SIRPGQ9P1W8 387 aa17.01■□□□□ 0.31
SQLE-205ENST00000521232 CD84Q9UIB8 345 aa17.01■□□□□ 0.31
SQLE-205ENST00000521232 MOSPD1Q9UJG1 213 aa17.01■□□□□ 0.31
SQLE-205ENST00000521232 NTN3O00634 580 aaPredicted RBP17■□□□□ 0.31
SQLE-205ENST00000521232 TLX3O43711 291 aaPredicted RBP17■□□□□ 0.31
SQLE-205ENST00000521232 BRINP1O60477 761 aa17■□□□□ 0.31
SQLE-205ENST00000521232 USP12O75317 370 aa17■□□□□ 0.31
SQLE-205ENST00000521232 CLDN7O95471 211 aa17■□□□□ 0.31
SQLE-205ENST00000521232 SOD1P00441 154 aa17■□□□□ 0.31
SQLE-205ENST00000521232 CYLC1P35663 651 aaPredicted RBP17■□□□□ 0.31
SQLE-205ENST00000521232 EIF2S3P41091 472 aaKnown RBP17■□□□□ 0.31
SQLE-205ENST00000521232 GPR1P46091 355 aa17■□□□□ 0.31
SQLE-205ENST00000521232 NR2C2P49116 596 aa17■□□□□ 0.31
SQLE-205ENST00000521232 TFDP2Q14188 446 aa17■□□□□ 0.31
SQLE-205ENST00000521232 SPA17Q15506 151 aa17■□□□□ 0.31
SQLE-205ENST00000521232 QPCTQ16769 361 aa17■□□□□ 0.31
SQLE-205ENST00000521232 C19orf48Q6RUI8 117 aa17■□□□□ 0.31
SQLE-205ENST00000521232 ADAMTSL4Q6UY14 1074 aa17■□□□□ 0.31
SQLE-205ENST00000521232 RBM44Q6ZP01 1051 aaKnown RBP17■□□□□ 0.31
SQLE-205ENST00000521232 BZW1Q7L1Q6 419 aaKnown RBP17■□□□□ 0.31
SQLE-205ENST00000521232 FAM46DQ8NEK8 389 aa17■□□□□ 0.31
SQLE-205ENST00000521232 LPCAT1Q8NF37 534 aa17■□□□□ 0.31
SQLE-205ENST00000521232 CCL4L1Q8NHW4 92 aa17■□□□□ 0.31
SQLE-205ENST00000521232 GPBAR1Q8TDU6 330 aa17■□□□□ 0.31
SQLE-205ENST00000521232 SCAMP4Q969E2 229 aa17■□□□□ 0.31
SQLE-205ENST00000521232 IMP4Q96G21 291 aaKnown RBP17■□□□□ 0.31
SQLE-205ENST00000521232 SCARF2Q96GP6 870 aaPredicted RBP17■□□□□ 0.31
SQLE-205ENST00000521232 MLPHQ9BV36 600 aaPredicted RBP17■□□□□ 0.31
SQLE-205ENST00000521232 CARS2Q9HA77 564 aaKnown RBP17■□□□□ 0.31
SQLE-205ENST00000521232 LUC7LQ9NQ29 371 aaKnown RBP17■□□□□ 0.31
SQLE-205ENST00000521232 TRNAU1APQ9NX07 287 aaKnown RBP17■□□□□ 0.31
SQLE-205ENST00000521232 TFR2Q9UP52 801 aa17■□□□□ 0.31
SQLE-205ENST00000521232 LHX6Q9UPM6 363 aa17■□□□□ 0.31
SQLE-205ENST00000521232 SLC17A4Q9Y2C5 497 aa17■□□□□ 0.31
SQLE-205ENST00000521232 EPN1Q9Y6I3 576 aaPredicted RBP17■□□□□ 0.31
SQLE-205ENST00000521232 KIF26BQ2KJY2 2108 aa16.99■□□□□ 0.31
SQLE-205ENST00000521232 GOLGA6CA6NDK9 693 aa16.99■□□□□ 0.31
SQLE-205ENST00000521232 GOLGA6BA6NDN3 693 aa16.99■□□□□ 0.31
SQLE-205ENST00000521232 CASC3O15234 703 aaKnown RBP16.99■□□□□ 0.31
SQLE-205ENST00000521232 NOBOXO60393 691 aa16.99■□□□□ 0.31
SQLE-205ENST00000521232 PYGLP06737 847 aa16.99■□□□□ 0.31
SQLE-205ENST00000521232 GOLGA6DP0CG33 693 aa16.99■□□□□ 0.31
SQLE-205ENST00000521232 FECHP22830 423 aa16.99■□□□□ 0.31
SQLE-205ENST00000521232 LSSP48449 732 aa16.99■□□□□ 0.31
SQLE-205ENST00000521232 DYNLT1P63172 113 aa16.99■□□□□ 0.31
SQLE-205ENST00000521232 TEX44Q53QW1 395 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms