RNA–Protein interactions for RNA: ENST00000520944.5

SNHG6-203, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 1 (best) BASIC

Gene SNHG6, Length 638 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-203ENST00000520944 GPR1P46091 355 aa20.49■□□□□ 0.87
SNHG6-203ENST00000520944 CDK3Q00526 305 aa20.49■□□□□ 0.87
SNHG6-203ENST00000520944 ILF3Q12906 894 aaKnown RBP eCLIP20.49■□□□□ 0.87
SNHG6-203ENST00000520944 PTPRRQ15256 657 aa20.49■□□□□ 0.87
SNHG6-203ENST00000520944 ASTE1Q2TB18 679 aaPredicted RBP20.49■□□□□ 0.87
SNHG6-203ENST00000520944 Q8N9G6 341 aaPredicted RBP20.49■□□□□ 0.87
SNHG6-203ENST00000520944 SLC35G2Q8TBE7 412 aa20.49■□□□□ 0.87
SNHG6-203ENST00000520944 KIAA1524Q8TCG1 905 aa20.49■□□□□ 0.87
SNHG6-203ENST00000520944 KCNE4Q8WWG9 221 aa20.49■□□□□ 0.87
SNHG6-203ENST00000520944 FAF2Q96CS3 445 aa20.49■□□□□ 0.87
SNHG6-203ENST00000520944 UBL7Q96S82 380 aaPredicted RBP20.49■□□□□ 0.87
SNHG6-203ENST00000520944 GSDMCQ9BYG8 508 aa20.49■□□□□ 0.87
SNHG6-203ENST00000520944 LRRN3Q9H3W5 708 aa20.49■□□□□ 0.87
SNHG6-203ENST00000520944 TSPY26PQ9H489 355 aa20.49■□□□□ 0.87
SNHG6-203ENST00000520944 ASCL3Q9NQ33 180 aa20.49■□□□□ 0.87
SNHG6-203ENST00000520944 APPL1Q9UKG1 709 aa20.49■□□□□ 0.87
SNHG6-203ENST00000520944 DNPEPQ9ULA0 475 aa20.49■□□□□ 0.87
SNHG6-203ENST00000520944 LRRK1Q38SD2 2015 aa20.49■□□□□ 0.87
SNHG6-203ENST00000520944 A0A0J9YYE9 177 aa20.48■□□□□ 0.87
SNHG6-203ENST00000520944 CASC3O15234 703 aaKnown RBP20.48■□□□□ 0.87
SNHG6-203ENST00000520944 FZD6O60353 706 aa20.48■□□□□ 0.87
SNHG6-203ENST00000520944 TRBC1P01850 177 aa20.48■□□□□ 0.87
SNHG6-203ENST00000520944 CEACAM5P06731 702 aa20.48■□□□□ 0.87
SNHG6-203ENST00000520944 PNLIPP16233 465 aa20.48■□□□□ 0.87
SNHG6-203ENST00000520944 KDELR1P24390 212 aa20.48■□□□□ 0.87
SNHG6-203ENST00000520944 TEAD1P28347 426 aa20.48■□□□□ 0.87
SNHG6-203ENST00000520944 DSC2Q02487 901 aa20.48■□□□□ 0.87
SNHG6-203ENST00000520944 GBE1Q04446 702 aa20.48■□□□□ 0.87
SNHG6-203ENST00000520944 DPTQ07507 201 aa20.48■□□□□ 0.87
SNHG6-203ENST00000520944 COL9A2Q14055 689 aaPredicted RBP20.48■□□□□ 0.87
SNHG6-203ENST00000520944 C14orf28Q4W4Y0 310 aa20.48■□□□□ 0.87
SNHG6-203ENST00000520944 CERCAMQ5T4B2 595 aa20.48■□□□□ 0.87
SNHG6-203ENST00000520944 LRRC66Q68CR7 880 aa20.48■□□□□ 0.87
SNHG6-203ENST00000520944 TECPR1Q7Z6L1 1165 aa20.48■□□□□ 0.87
SNHG6-203ENST00000520944 CCNJLQ8IV13 435 aa20.48■□□□□ 0.87
SNHG6-203ENST00000520944 PQLC3Q8N755 202 aa20.48■□□□□ 0.87
SNHG6-203ENST00000520944 CCL4L1Q8NHW4 92 aa20.48■□□□□ 0.87
SNHG6-203ENST00000520944 AP2M1Q96CW1 435 aa20.48■□□□□ 0.87
SNHG6-203ENST00000520944 CCDC97Q96F63 343 aaPredicted RBP20.48■□□□□ 0.87
SNHG6-203ENST00000520944 ANP32EQ9BTT0 268 aa20.48■□□□□ 0.87
SNHG6-203ENST00000520944 MAK16Q9BXY0 300 aaKnown RBP20.48■□□□□ 0.87
SNHG6-203ENST00000520944 DPH1Q9BZG8 443 aa20.48■□□□□ 0.87
SNHG6-203ENST00000520944 EPB41L5Q9HCM4 733 aa20.48■□□□□ 0.87
SNHG6-203ENST00000520944 ABHD10Q9NUJ1 306 aa20.48■□□□□ 0.87
SNHG6-203ENST00000520944 LRIT1Q9P2V4 623 aa20.48■□□□□ 0.87
SNHG6-203ENST00000520944 CHKBQ9Y259 395 aa20.48■□□□□ 0.87
SNHG6-203ENST00000520944 A0A1W2PNU3 283 aaPredicted RBP20.47■□□□□ 0.87
SNHG6-203ENST00000520944 TNFSF15O95150 251 aa20.47■□□□□ 0.87
SNHG6-203ENST00000520944 ZNF30P17039 623 aa20.47■□□□□ 0.87
SNHG6-203ENST00000520944 ARHGAP25P42331 645 aa20.47■□□□□ 0.87
SNHG6-203ENST00000520944 MLLT3P42568 568 aaPredicted RBP20.47■□□□□ 0.87
SNHG6-203ENST00000520944 GNPDA1P46926 289 aa20.47■□□□□ 0.87
SNHG6-203ENST00000520944 UCNP55089 124 aa20.47■□□□□ 0.87
SNHG6-203ENST00000520944 CXADRP78310 365 aa20.47■□□□□ 0.87
SNHG6-203ENST00000520944 PTSQ03393 145 aa20.47■□□□□ 0.87
SNHG6-203ENST00000520944 EIF3IQ13347 325 aaKnown RBP20.47■□□□□ 0.87
SNHG6-203ENST00000520944 PEX6Q13608 980 aa20.47■□□□□ 0.87
SNHG6-203ENST00000520944 ODF2Q5BJF6 829 aa20.47■□□□□ 0.87
SNHG6-203ENST00000520944 ALG1LQ6GMV1 187 aa20.47■□□□□ 0.87
SNHG6-203ENST00000520944 GPR155Q7Z3F1 870 aa20.47■□□□□ 0.87
SNHG6-203ENST00000520944 VSTM4Q8IW00 320 aa20.47■□□□□ 0.87
SNHG6-203ENST00000520944 CCDC13Q8IYE1 715 aa20.47■□□□□ 0.87
SNHG6-203ENST00000520944 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.47■□□□□ 0.87
SNHG6-203ENST00000520944 GPBAR1Q8TDU6 330 aa20.47■□□□□ 0.87
SNHG6-203ENST00000520944 RAPGEF5Q92565 580 aa20.47■□□□□ 0.87
SNHG6-203ENST00000520944 LIN37Q96GY3 246 aaPredicted RBP20.47■□□□□ 0.87
SNHG6-203ENST00000520944 TMEM74Q96NL1 305 aa20.47■□□□□ 0.87
SNHG6-203ENST00000520944 RNF157Q96PX1 679 aa20.47■□□□□ 0.87
SNHG6-203ENST00000520944 FRMD8Q9BZ67 464 aaPredicted RBP20.47■□□□□ 0.87
SNHG6-203ENST00000520944 NHEJ1Q9H9Q4 299 aaPredicted RBP20.47■□□□□ 0.87
SNHG6-203ENST00000520944 TRNAU1APQ9NX07 287 aaKnown RBP20.47■□□□□ 0.87
SNHG6-203ENST00000520944 CD84Q9UIB8 345 aa20.47■□□□□ 0.87
SNHG6-203ENST00000520944 SUFUQ9UMX1 484 aa20.47■□□□□ 0.87
SNHG6-203ENST00000520944 RP1P56715 2156 aa20.46■□□□□ 0.87
SNHG6-203ENST00000520944 A0A0U1RQS6 177 aa20.46■□□□□ 0.87
SNHG6-203ENST00000520944 A0A1W2PQM1 296 aa20.46■□□□□ 0.87
SNHG6-203ENST00000520944 LRRD1A4D1F6 860 aa20.46■□□□□ 0.87
SNHG6-203ENST00000520944 D6RAR5 112 aa20.46■□□□□ 0.87
SNHG6-203ENST00000520944 KLK10O43240 276 aa20.46■□□□□ 0.87
SNHG6-203ENST00000520944 ZW10O43264 779 aa20.46■□□□□ 0.87
SNHG6-203ENST00000520944 NUDT21O43809 227 aaKnown RBP20.46■□□□□ 0.87
SNHG6-203ENST00000520944 NOBOXO60393 691 aa20.46■□□□□ 0.87
SNHG6-203ENST00000520944 PYGLP06737 847 aa20.46■□□□□ 0.87
SNHG6-203ENST00000520944 PDX1P52945 283 aa20.46■□□□□ 0.87
SNHG6-203ENST00000520944 INHBCP55103 352 aa20.46■□□□□ 0.87
SNHG6-203ENST00000520944 RPL26P61254 145 aaKnown RBP20.46■□□□□ 0.87
SNHG6-203ENST00000520944 SLC10A2Q12908 348 aaPredicted RBP20.46■□□□□ 0.87
SNHG6-203ENST00000520944 BIRC2Q13490 618 aa20.46■□□□□ 0.87
SNHG6-203ENST00000520944 HLTFQ14527 1009 aaKnown RBP eCLIP20.46■□□□□ 0.876e-8■□□□□ 8.6
SNHG6-203ENST00000520944 DOK6Q6PKX4 331 aa20.46■□□□□ 0.87
SNHG6-203ENST00000520944 RHOT2Q8IXI1 618 aa20.46■□□□□ 0.87
SNHG6-203ENST00000520944 FBXO39Q8N4B4 442 aa20.46■□□□□ 0.87
SNHG6-203ENST00000520944 ZDHHC1Q8WTX9 485 aa20.46■□□□□ 0.87
SNHG6-203ENST00000520944 LRRN4Q8WUT4 740 aa20.46■□□□□ 0.87
SNHG6-203ENST00000520944 HDAC11Q96DB2 347 aa20.46■□□□□ 0.87
SNHG6-203ENST00000520944 PRR11Q96HE9 360 aaPredicted RBP20.46■□□□□ 0.87
SNHG6-203ENST00000520944 CHP1Q99653 195 aa20.46■□□□□ 0.87
SNHG6-203ENST00000520944 TDRD1Q9BXT4 1180 aaKnown RBP20.46■□□□□ 0.87
SNHG6-203ENST00000520944 FOXP3Q9BZS1 431 aa20.46■□□□□ 0.87
SNHG6-203ENST00000520944 ABCG8Q9H221 673 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms