RNA–Protein interactions for RNA: ENST00000519141.5

SPIDR-209, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,699 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-209ENST00000519141 POLR2LP62875 67 aaKnown RBP12.38□□□□□ -0.43
SPIDR-209ENST00000519141 USP10Q14694 798 aaKnown RBP12.38□□□□□ -0.43
SPIDR-209ENST00000519141 TAF1BQ53T94 588 aaPredicted RBP12.38□□□□□ -0.43
SPIDR-209ENST00000519141 NAIF1Q69YI7 327 aaPredicted RBP12.38□□□□□ -0.43
SPIDR-209ENST00000519141 CNSTQ6PJW8 725 aa12.38□□□□□ -0.43
SPIDR-209ENST00000519141 NUDT18Q6ZVK8 323 aa12.38□□□□□ -0.43
SPIDR-209ENST00000519141 SLC41A1Q8IVJ1 513 aa12.38□□□□□ -0.43
SPIDR-209ENST00000519141 ZNF366Q8N895 744 aa12.38□□□□□ -0.43
SPIDR-209ENST00000519141 GPATCH11Q8N954 259 aa12.38□□□□□ -0.43
SPIDR-209ENST00000519141 SCG3Q8WXD2 468 aaKnown RBP12.38□□□□□ -0.43
SPIDR-209ENST00000519141 SCRN2Q96FV2 425 aa12.38□□□□□ -0.43
SPIDR-209ENST00000519141 ELMO2Q96JJ3 720 aa12.38□□□□□ -0.43
SPIDR-209ENST00000519141 FAM111AQ96PZ2 611 aa12.38□□□□□ -0.43
SPIDR-209ENST00000519141 MCCC1Q96RQ3 725 aaPredicted RBP12.38□□□□□ -0.43
SPIDR-209ENST00000519141 LYSMD1Q96S90 227 aa12.38□□□□□ -0.43
SPIDR-209ENST00000519141 C19orf43Q9BQ61 176 aa12.38□□□□□ -0.43
SPIDR-209ENST00000519141 VPS11Q9H270 941 aa12.38□□□□□ -0.43
SPIDR-209ENST00000519141 MTG2Q9H4K7 406 aa12.38□□□□□ -0.43
SPIDR-209ENST00000519141 CAB39LQ9H9S4 337 aa12.38□□□□□ -0.43
SPIDR-209ENST00000519141 BPIFA1Q9NP55 256 aa12.38□□□□□ -0.43
SPIDR-209ENST00000519141 PPIL1Q9Y3C6 166 aa12.38□□□□□ -0.43
SPIDR-209ENST00000519141 A0A096LPK6 155 aa12.37□□□□□ -0.43
SPIDR-209ENST00000519141 A0A0U1RQS6 177 aa12.37□□□□□ -0.43
SPIDR-209ENST00000519141 GMNCA6NCL1 334 aa12.37□□□□□ -0.43
SPIDR-209ENST00000519141 GRXCR2A6NFK2 248 aa12.37□□□□□ -0.43
SPIDR-209ENST00000519141 NPIPB15A6NHN6 443 aaPredicted RBP12.37□□□□□ -0.43
SPIDR-209ENST00000519141 ANHXE9PGG2 379 aa12.37□□□□□ -0.43
SPIDR-209ENST00000519141 H7C0S8 307 aa12.37□□□□□ -0.43
SPIDR-209ENST00000519141 ARNTLO00327 626 aa12.37□□□□□ -0.43
SPIDR-209ENST00000519141 S1PR4O95977 384 aa12.37□□□□□ -0.43
SPIDR-209ENST00000519141 APODP05090 189 aa12.37□□□□□ -0.43
SPIDR-209ENST00000519141 STMN1P16949 149 aa12.37□□□□□ -0.43
SPIDR-209ENST00000519141 SAT1P21673 171 aa12.37□□□□□ -0.43
SPIDR-209ENST00000519141 NFKBIAP25963 317 aa12.37□□□□□ -0.43
SPIDR-209ENST00000519141 MC4RP32245 332 aa12.37□□□□□ -0.43
SPIDR-209ENST00000519141 GRIA2P42262 883 aa12.37□□□□□ -0.43
SPIDR-209ENST00000519141 STC1P52823 247 aa12.37□□□□□ -0.43
SPIDR-209ENST00000519141 SEC24CP53992 1094 aa12.37□□□□□ -0.43
SPIDR-209ENST00000519141 SLC12A2P55011 1212 aa12.37□□□□□ -0.43
SPIDR-209ENST00000519141 ZNF234Q14588 700 aa12.37□□□□□ -0.43
SPIDR-209ENST00000519141 TYSND1Q2T9J0 566 aa12.37□□□□□ -0.43
SPIDR-209ENST00000519141 HNRNPA1L2Q32P51 320 aaKnown RBP12.37□□□□□ -0.43
SPIDR-209ENST00000519141 ARSIQ5FYB1 569 aa12.37□□□□□ -0.43
SPIDR-209ENST00000519141 PTCRAQ6ISU1 281 aaPredicted RBP12.37□□□□□ -0.43
SPIDR-209ENST00000519141 SERPINA13PQ6UXR4 307 aa12.37□□□□□ -0.43
SPIDR-209ENST00000519141 CDHR3Q6ZTQ4 885 aa12.37□□□□□ -0.43
SPIDR-209ENST00000519141 TPRG1Q6ZUI0 275 aa12.37□□□□□ -0.43
SPIDR-209ENST00000519141 RAPH1Q70E73 1250 aa12.37□□□□□ -0.43
SPIDR-209ENST00000519141 LDB1Q86U70 411 aaPredicted RBP12.37□□□□□ -0.43
SPIDR-209ENST00000519141 ACVR1CQ8NER5 493 aa12.37□□□□□ -0.43
SPIDR-209ENST00000519141 CSGALNACT1Q8TDX6 532 aa12.37□□□□□ -0.43
SPIDR-209ENST00000519141 CHMP6Q96FZ7 201 aa12.37□□□□□ -0.43
SPIDR-209ENST00000519141 MAGEB18Q96M61 343 aa12.37□□□□□ -0.43
SPIDR-209ENST00000519141 C12orf65Q9H3J6 166 aaKnown RBP12.37□□□□□ -0.43
SPIDR-209ENST00000519141 DCDC2Q9UHG0 476 aa12.37□□□□□ -0.43
SPIDR-209ENST00000519141 GRID1Q9ULK0 1009 aa12.37□□□□□ -0.43
SPIDR-209ENST00000519141 CORO1CQ9ULV4 474 aaPredicted RBP12.37□□□□□ -0.43
SPIDR-209ENST00000519141 FNDC3AQ9Y2H6 1198 aaKnown RBP12.37□□□□□ -0.43
SPIDR-209ENST00000519141 PLLPQ9Y342 182 aa12.37□□□□□ -0.43
SPIDR-209ENST00000519141 TSPAN11A1L157 253 aa12.36□□□□□ -0.43
SPIDR-209ENST00000519141 PFDN6O15212 129 aa12.36□□□□□ -0.43
SPIDR-209ENST00000519141 CLDN7O95471 211 aa12.36□□□□□ -0.43
SPIDR-209ENST00000519141 PRNPP04156 253 aa12.36□□□□□ -0.43
SPIDR-209ENST00000519141 C2P06681 752 aa12.36□□□□□ -0.43
SPIDR-209ENST00000519141 GSTA1P08263 222 aa12.36□□□□□ -0.43
SPIDR-209ENST00000519141 IL9P15248 144 aa12.36□□□□□ -0.43
SPIDR-209ENST00000519141 FOXN2P32314 431 aa12.36□□□□□ -0.43
SPIDR-209ENST00000519141 ETV4P43268 484 aa12.36□□□□□ -0.43
SPIDR-209ENST00000519141 POU4F1Q01851 419 aa12.36□□□□□ -0.43
SPIDR-209ENST00000519141 SEMA3AQ14563 771 aa12.36□□□□□ -0.43
SPIDR-209ENST00000519141 INSCQ1MX18 579 aa12.36□□□□□ -0.43
SPIDR-209ENST00000519141 ZRANB3Q5FWF4 1079 aa12.36□□□□□ -0.43
SPIDR-209ENST00000519141 ZNF789Q5FWF6 425 aa12.36□□□□□ -0.43
SPIDR-209ENST00000519141 PPM1JQ5JR12 505 aa12.36□□□□□ -0.43
SPIDR-209ENST00000519141 AARS2Q5JTZ9 985 aaKnown RBP12.36□□□□□ -0.43
SPIDR-209ENST00000519141 KYAT3Q6YP21 454 aaKnown RBP12.36□□□□□ -0.43
SPIDR-209ENST00000519141 SFTPA1Q8IWL2 248 aa12.36□□□□□ -0.43
SPIDR-209ENST00000519141 OR8D1Q8WZ84 308 aa12.36□□□□□ -0.43
SPIDR-209ENST00000519141 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.36□□□□□ -0.43
SPIDR-209ENST00000519141 TSPAN17Q96FV3 270 aa12.36□□□□□ -0.43
SPIDR-209ENST00000519141 TSNARE1Q96NA8 513 aa12.36□□□□□ -0.43
SPIDR-209ENST00000519141 TCF12Q99081 682 aa12.36□□□□□ -0.43
SPIDR-209ENST00000519141 RABEP2Q9H5N1 569 aa12.36□□□□□ -0.43
SPIDR-209ENST00000519141 INTS10Q9NVR2 710 aaKnown RBP12.36□□□□□ -0.43
SPIDR-209ENST00000519141 TLK1Q9UKI8 766 aa12.36□□□□□ -0.43
SPIDR-209ENST00000519141 VPS9D1Q9Y2B5 631 aa12.36□□□□□ -0.43
SPIDR-209ENST00000519141 ANKRD6Q9Y2G4 727 aa12.36□□□□□ -0.43
SPIDR-209ENST00000519141 SLC30A1Q9Y6M5 507 aa12.36□□□□□ -0.43
SPIDR-209ENST00000519141 UPK3BL1B0FP48 263 aa12.35□□□□□ -0.43
SPIDR-209ENST00000519141 UPK3BL2E5RIL1 263 aa12.35□□□□□ -0.43
SPIDR-209ENST00000519141 PHGDHO43175 533 aaKnown RBP12.35□□□□□ -0.43
SPIDR-209ENST00000519141 NDUFS3O75489 264 aa12.35□□□□□ -0.43
SPIDR-209ENST00000519141 TOP3BO95985 862 aaKnown RBP12.35□□□□□ -0.43
SPIDR-209ENST00000519141 CTSLP07711 333 aa12.35□□□□□ -0.43
SPIDR-209ENST00000519141 VIMP08670 466 aaKnown RBP12.35□□□□□ -0.43
SPIDR-209ENST00000519141 DHRS4L1P0CG22 281 aa12.35□□□□□ -0.43
SPIDR-209ENST00000519141 HLA-EP13747 358 aa12.35□□□□□ -0.43
SPIDR-209ENST00000519141 XPAP23025 273 aaPredicted RBP12.35□□□□□ -0.43
SPIDR-209ENST00000519141 CRABP2P29373 138 aa12.35□□□□□ -0.43
SPIDR-209ENST00000519141 TTPAP49638 278 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms