RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 CFAP221Q4G0U5 840 aa4.98□□□□□ -1.61
CTNNA1-212ENST00000518919 CTXN3Q4LDR2 81 aa4.98□□□□□ -1.61
CTNNA1-212ENST00000518919 PDCD4Q53EL6 469 aaKnown RBP4.98□□□□□ -1.61
CTNNA1-212ENST00000518919 ICE2Q659A1 982 aa4.98□□□□□ -1.61
CTNNA1-212ENST00000518919 NAIF1Q69YI7 327 aaPredicted RBP4.98□□□□□ -1.61
CTNNA1-212ENST00000518919 ITPRIPL1Q6GPH6 555 aa4.98□□□□□ -1.61
CTNNA1-212ENST00000518919 C8orf74Q6P047 294 aa4.98□□□□□ -1.61
CTNNA1-212ENST00000518919 MAMDC4Q6UXC1 1216 aa4.98□□□□□ -1.61
CTNNA1-212ENST00000518919 CCNI2Q6ZMN8 369 aaPredicted RBP4.98□□□□□ -1.61
CTNNA1-212ENST00000518919 PLPPR4Q7Z2D5 763 aa4.98□□□□□ -1.61
CTNNA1-212ENST00000518919 PEX26Q7Z412 305 aa4.98□□□□□ -1.61
CTNNA1-212ENST00000518919 POLNQ7Z5Q5 900 aa4.98□□□□□ -1.61
CTNNA1-212ENST00000518919 SYCE1Q8N0S2 351 aa4.98□□□□□ -1.61
CTNNA1-212ENST00000518919 SUN3Q8TAQ9 357 aa4.98□□□□□ -1.61
CTNNA1-212ENST00000518919 ACTRT1Q8TDG2 376 aa4.98□□□□□ -1.61
CTNNA1-212ENST00000518919 SCFD2Q8WU76 684 aa4.98□□□□□ -1.61
CTNNA1-212ENST00000518919 PRPF31Q8WWY3 499 aaKnown RBP4.98□□□□□ -1.61
CTNNA1-212ENST00000518919 CTNNBL1Q8WYA6 563 aaPredicted RBP4.98□□□□□ -1.61
CTNNA1-212ENST00000518919 CENPIQ92674 756 aaPredicted RBP4.98□□□□□ -1.61
CTNNA1-212ENST00000518919 TAF4BQ92750 862 aa4.98□□□□□ -1.61
CTNNA1-212ENST00000518919 KRT35Q92764 455 aa4.98□□□□□ -1.61
CTNNA1-212ENST00000518919 PBKQ96KB5 322 aa4.98□□□□□ -1.61
CTNNA1-212ENST00000518919 SPATA33Q96N06 139 aa4.98□□□□□ -1.61
CTNNA1-212ENST00000518919 KRT12Q99456 494 aa4.98□□□□□ -1.61
CTNNA1-212ENST00000518919 MNTQ99583 582 aa4.98□□□□□ -1.61
CTNNA1-212ENST00000518919 BARD1Q99728 777 aaKnown RBP4.98□□□□□ -1.61
CTNNA1-212ENST00000518919 CHCHD6Q9BRQ6 235 aa4.98□□□□□ -1.61
CTNNA1-212ENST00000518919 VN1R3Q9BXE9 311 aa4.98□□□□□ -1.61
CTNNA1-212ENST00000518919 GPR87Q9BY21 358 aa4.98□□□□□ -1.61
CTNNA1-212ENST00000518919 PAIP1Q9H074 479 aaKnown RBP4.98□□□□□ -1.61
CTNNA1-212ENST00000518919 AZI2Q9H6S1 392 aa4.98□□□□□ -1.61
CTNNA1-212ENST00000518919 PLEKHA5Q9HAU0 1116 aa4.98□□□□□ -1.61
CTNNA1-212ENST00000518919 GDF3Q9NR23 364 aa4.98□□□□□ -1.61
CTNNA1-212ENST00000518919 NRBP2Q9NSY0 501 aa4.98□□□□□ -1.61
CTNNA1-212ENST00000518919 RBAKQ9NYW8 714 aaPredicted RBP4.98□□□□□ -1.61
CTNNA1-212ENST00000518919 RNF14Q9UBS8 474 aa4.98□□□□□ -1.61
CTNNA1-212ENST00000518919 MORF4L1Q9UBU8 362 aa4.98□□□□□ -1.61
CTNNA1-212ENST00000518919 CHORDC1Q9UHD1 332 aaPredicted RBP4.98□□□□□ -1.61
CTNNA1-212ENST00000518919 GTF3C4Q9UKN8 822 aa4.98□□□□□ -1.61
CTNNA1-212ENST00000518919 ZFR2Q9UPR6 939 aaKnown RBP4.98□□□□□ -1.61
CTNNA1-212ENST00000518919 SSX2IPQ9Y2D8 614 aa4.98□□□□□ -1.61
CTNNA1-212ENST00000518919 DNAJC16Q9Y2G8 782 aa4.98□□□□□ -1.61
CTNNA1-212ENST00000518919 SLC27A6Q9Y2P4 619 aa4.98□□□□□ -1.61
CTNNA1-212ENST00000518919 SLC45A1Q9Y2W3 748 aa4.98□□□□□ -1.61
CTNNA1-212ENST00000518919 MCM3APO60318 1980 aa4.98□□□□□ -1.61
CTNNA1-212ENST00000518919 ZSWIM8A7E2V4 1837 aa4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 ZNF236Q9UL36 1845 aa4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 MYH10P35580 1976 aa4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 CCL15-CCL14A0A0B4J2E2 113 aa4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 A6NCN8 305 aa4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 ASB14A6NK59 587 aa4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 TMEM110-MUSTN1A8MSY1 372 aa4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 K7ERI5 159 aa4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 PDHXO00330 501 aa4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 B4GALT5O43286 388 aa4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 RTN2O75298 545 aa4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 WDR47O94967 919 aa4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 HEXIM1O94992 359 aaKnown RBP4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 RTN3O95197 1032 aaPredicted RBP4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 LGALS2P05162 132 aa4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 HOXC6P09630 235 aa4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 ZNF286BP0CG31 522 aa4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 GZMAP12544 262 aa4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 UNGP13051 313 aaPredicted RBP4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 KRT5P13647 590 aa4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 DRD1P21728 446 aa4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 MCM3P25205 808 aa4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 MAGEA10P43363 369 aaPredicted RBP4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 TNNT3P45378 269 aaPredicted RBP4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 GSTM5P46439 218 aa4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 MAN2A2P49641 1150 aa4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 EFNA5P52803 228 aa4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 DCAF7P61962 342 aa4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 TNNC1P63316 161 aa4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 NOP14P78316 857 aaKnown RBP4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 POU5F1Q01860 360 aaKnown RBP4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 RNASELQ05823 741 aaKnown RBP4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 MBTD1Q05BQ5 628 aa4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 CUL2Q13617 745 aa4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 GRB14Q14449 540 aa4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 CLCA4Q14CN2 919 aa4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 TRADDQ15628 312 aa4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 CCL15Q16663 113 aa4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 GEN1Q17RS7 908 aa4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 GLE1Q53GS7 698 aaKnown RBP4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 ACAD10Q6JQN1 1059 aa4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 TCTN3Q6NUS6 607 aa4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 MSANTD2Q6P1R3 559 aa4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 KCNV1Q6PIU1 500 aa4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 MICALCLQ6ZW33 695 aa4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 ENOSF1Q7L5Y1 443 aa4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 ANKRD23Q86SG2 305 aa4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 KLHL7Q8IXQ5 586 aa4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 EFCAB13Q8IY85 973 aa4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 ABRAQ8N0Z2 381 aa4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 FAM109AQ8N4B1 249 aa4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 C11orf44Q8N8P7 122 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms