RNA–Protein interactions for RNA: ENST00000518780.1

CLN8-203, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-203ENST00000518780 HS3ST3A1Q9Y663 406 aa9.47□□□□□ -0.89
CLN8-203ENST00000518780 CUL9Q8IWT3 2517 aa9.47□□□□□ -0.89
CLN8-203ENST00000518780 IGLON5A6NGN9 336 aa9.46□□□□□ -0.9
CLN8-203ENST00000518780 FAM47DPA6NHR8 397 aa9.46□□□□□ -0.9
CLN8-203ENST00000518780 PRAMEF26H0Y7S4 382 aa9.46□□□□□ -0.9
CLN8-203ENST00000518780 MMP20O60882 483 aa9.46□□□□□ -0.9
CLN8-203ENST00000518780 LILRB5O75023 590 aa9.46□□□□□ -0.9
CLN8-203ENST00000518780 AVILO75366 819 aa9.46□□□□□ -0.9
CLN8-203ENST00000518780 RECQL5O94762 991 aaPredicted RBP9.46□□□□□ -0.9
CLN8-203ENST00000518780 USP1O94782 785 aa9.46□□□□□ -0.9
CLN8-203ENST00000518780 PIRTP0C851 137 aa9.46□□□□□ -0.9
CLN8-203ENST00000518780 MGAT1P26572 445 aa9.46□□□□□ -0.9
CLN8-203ENST00000518780 CD27P26842 260 aa9.46□□□□□ -0.9
CLN8-203ENST00000518780 AKT2P31751 481 aa9.46□□□□□ -0.9
CLN8-203ENST00000518780 CARSP49589 748 aaKnown RBP9.46□□□□□ -0.9
CLN8-203ENST00000518780 ZNF140P52738 457 aaPredicted RBP9.46□□□□□ -0.9
CLN8-203ENST00000518780 TERF1P54274 439 aa9.46□□□□□ -0.9
CLN8-203ENST00000518780 RPL6Q02878 288 aaKnown RBP9.46□□□□□ -0.9
CLN8-203ENST00000518780 DHX9Q08211 1270 aaKnown RBP9.46□□□□□ -0.9
CLN8-203ENST00000518780 OVGP1Q12889 678 aa9.46□□□□□ -0.9
CLN8-203ENST00000518780 ILF2Q12905 390 aaKnown RBP9.46□□□□□ -0.9
CLN8-203ENST00000518780 PDIA2Q13087 525 aaKnown RBP9.46□□□□□ -0.9
CLN8-203ENST00000518780 LRRC14Q15048 493 aa9.46□□□□□ -0.9
CLN8-203ENST00000518780 ACOX1Q15067 660 aa9.46□□□□□ -0.9
CLN8-203ENST00000518780 TRADDQ15628 312 aa9.46□□□□□ -0.9
CLN8-203ENST00000518780 ERCC6LQ2NKX8 1250 aa9.46□□□□□ -0.9
CLN8-203ENST00000518780 ZNF284Q2VY69 593 aa9.46□□□□□ -0.9
CLN8-203ENST00000518780 BBS9Q3SYG4 887 aa9.46□□□□□ -0.9
CLN8-203ENST00000518780 GPR33Q49SQ1 333 aa9.46□□□□□ -0.9
CLN8-203ENST00000518780 FNBP1LQ5T0N5 605 aa9.46□□□□□ -0.9
CLN8-203ENST00000518780 CASC4Q6P4E1 433 aa9.46□□□□□ -0.9
CLN8-203ENST00000518780 ZNF449Q6P9G9 518 aa9.46□□□□□ -0.9
CLN8-203ENST00000518780 TSSK4Q6SA08 328 aa9.46□□□□□ -0.9
CLN8-203ENST00000518780 HSD11B1LQ7Z5J1 315 aa9.46□□□□□ -0.9
CLN8-203ENST00000518780 TSPAN33Q86UF1 283 aa9.46□□□□□ -0.9
CLN8-203ENST00000518780 PIP4P2Q8N4L2 257 aa9.46□□□□□ -0.9
CLN8-203ENST00000518780 PYROXD1Q8WU10 500 aa9.46□□□□□ -0.9
CLN8-203ENST00000518780 RLN3Q8WXF3 142 aa9.46□□□□□ -0.9
CLN8-203ENST00000518780 DNASE2BQ8WZ79 361 aa9.46□□□□□ -0.9
CLN8-203ENST00000518780 DTD2Q96FN9 168 aa9.46□□□□□ -0.9
CLN8-203ENST00000518780 TTC25Q96NG3 672 aa9.46□□□□□ -0.9
CLN8-203ENST00000518780 ZSCAN5AQ9BUG6 496 aa9.46□□□□□ -0.9
CLN8-203ENST00000518780 WRAP53Q9BUR4 548 aaKnown RBP9.46□□□□□ -0.9
CLN8-203ENST00000518780 CHRAC1Q9NRG0 131 aa9.46□□□□□ -0.9
CLN8-203ENST00000518780 TREX1Q9NSU2 369 aa9.46□□□□□ -0.9
CLN8-203ENST00000518780 MBD1Q9UIS9 605 aaPredicted RBP9.46□□□□□ -0.9
CLN8-203ENST00000518780 RAB21Q9UL25 225 aa9.46□□□□□ -0.9
CLN8-203ENST00000518780 ZFR2Q9UPR6 939 aaKnown RBP9.46□□□□□ -0.9
CLN8-203ENST00000518780 ITM2BQ9Y287 266 aa9.46□□□□□ -0.9
CLN8-203ENST00000518780 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.46□□□□□ -0.9
CLN8-203ENST00000518780 ARL5AQ9Y689 179 aa9.46□□□□□ -0.9
CLN8-203ENST00000518780 TEX264Q9Y6I9 313 aa9.46□□□□□ -0.9
CLN8-203ENST00000518780 SHROOM3Q8TF72 1996 aa9.46□□□□□ -0.9
CLN8-203ENST00000518780 A0A1W2PPC4 97 aa9.45□□□□□ -0.9
CLN8-203ENST00000518780 A8MX80 341 aa9.45□□□□□ -0.9
CLN8-203ENST00000518780 DLL1O00548 723 aa9.45□□□□□ -0.9
CLN8-203ENST00000518780 AURKAO14965 403 aa9.45□□□□□ -0.9
CLN8-203ENST00000518780 PFDN6O15212 129 aa9.45□□□□□ -0.9
CLN8-203ENST00000518780 PAK4O96013 591 aaPredicted RBP9.45□□□□□ -0.9
CLN8-203ENST00000518780 PRKCGP05129 697 aa9.45□□□□□ -0.9
CLN8-203ENST00000518780 IGHV4-34P06331 123 aa9.45□□□□□ -0.9
CLN8-203ENST00000518780 HOXC4P09017 264 aaPredicted RBP9.45□□□□□ -0.9
CLN8-203ENST00000518780 C1SP09871 688 aa9.45□□□□□ -0.9
CLN8-203ENST00000518780 HNRNPA2B1P22626 353 aaKnown RBP9.45□□□□□ -0.9
CLN8-203ENST00000518780 ECHS1P30084 290 aa9.45□□□□□ -0.9
CLN8-203ENST00000518780 HOXD12P35452 270 aa9.45□□□□□ -0.9
CLN8-203ENST00000518780 PPARGP37231 505 aaPredicted RBP9.45□□□□□ -0.9
CLN8-203ENST00000518780 SPAM1P38567 509 aa9.45□□□□□ -0.9
CLN8-203ENST00000518780 ELK3P41970 407 aa9.45□□□□□ -0.9
CLN8-203ENST00000518780 PRAMEP78395 509 aa9.45□□□□□ -0.9
CLN8-203ENST00000518780 DMWDQ09019 674 aa9.45□□□□□ -0.9
CLN8-203ENST00000518780 MTM1Q13496 603 aa9.45□□□□□ -0.9
CLN8-203ENST00000518780 ITGA9Q13797 1035 aa9.45□□□□□ -0.9
CLN8-203ENST00000518780 SEPT6Q14141 434 aa9.45□□□□□ -0.9
CLN8-203ENST00000518780 MAP9Q49MG5 647 aa9.45□□□□□ -0.9
CLN8-203ENST00000518780 ANKRD20A4Q4UJ75 823 aa9.45□□□□□ -0.9
CLN8-203ENST00000518780 LRRC73Q5JTD7 316 aa9.45□□□□□ -0.9
CLN8-203ENST00000518780 SPANXN3Q5MJ09 141 aa9.45□□□□□ -0.9
CLN8-203ENST00000518780 LYPLAL1Q5VWZ2 237 aa9.45□□□□□ -0.9
CLN8-203ENST00000518780 SEL1L3Q68CR1 1132 aa9.45□□□□□ -0.9
CLN8-203ENST00000518780 KIAA0930Q6ICG6 404 aaPredicted RBP9.45□□□□□ -0.9
CLN8-203ENST00000518780 ESRP1Q6NXG1 681 aaKnown RBP9.45□□□□□ -0.9
CLN8-203ENST00000518780 EMBQ6PCB8 327 aa9.45□□□□□ -0.9
CLN8-203ENST00000518780 CERS6Q6ZMG9 384 aa9.45□□□□□ -0.9
CLN8-203ENST00000518780 Q6ZVL8 140 aa9.45□□□□□ -0.9
CLN8-203ENST00000518780 RABEPKQ7Z6M1 372 aa9.45□□□□□ -0.9
CLN8-203ENST00000518780 IQCHQ86VS3 1027 aa9.45□□□□□ -0.9
CLN8-203ENST00000518780 DCP2Q8IU60 420 aaKnown RBP9.45□□□□□ -0.9
CLN8-203ENST00000518780 MPP5Q8N3R9 675 aa9.45□□□□□ -0.9
CLN8-203ENST00000518780 TRAM1L1Q8N609 369 aa9.45□□□□□ -0.9
CLN8-203ENST00000518780 OR4K2Q8NGD2 314 aa9.45□□□□□ -0.9
CLN8-203ENST00000518780 CALML6Q8TD86 181 aa9.45□□□□□ -0.9
CLN8-203ENST00000518780 HEXDCQ8WVB3 486 aa9.45□□□□□ -0.9
CLN8-203ENST00000518780 CENPTQ96BT3 561 aa9.45□□□□□ -0.9
CLN8-203ENST00000518780 BIRC7Q96CA5 298 aa9.45□□□□□ -0.9
CLN8-203ENST00000518780 AP2M1Q96CW1 435 aa9.45□□□□□ -0.9
CLN8-203ENST00000518780 EID2BQ96D98 161 aa9.45□□□□□ -0.9
CLN8-203ENST00000518780 NUS1Q96E22 293 aa9.45□□□□□ -0.9
CLN8-203ENST00000518780 CDKN2AIPNLQ96HQ2 116 aa9.45□□□□□ -0.9
CLN8-203ENST00000518780 LOXL4Q96JB6 756 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms