RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 STC1P52823 247 aa7.63□□□□□ -1.19
SCARNA20.1-201ENST00000516009 SEC24CP53992 1094 aa7.63□□□□□ -1.19
SCARNA20.1-201ENST00000516009 RAB10P61026 200 aa7.63□□□□□ -1.19
SCARNA20.1-201ENST00000516009 POU4F1Q01851 419 aa7.63□□□□□ -1.19
SCARNA20.1-201ENST00000516009 MESP2Q0VG99 397 aa7.63□□□□□ -1.19
SCARNA20.1-201ENST00000516009 ZNF234Q14588 700 aa7.63□□□□□ -1.19
SCARNA20.1-201ENST00000516009 E2F5Q15329 346 aa7.63□□□□□ -1.19
SCARNA20.1-201ENST00000516009 INSCQ1MX18 579 aa7.63□□□□□ -1.19
SCARNA20.1-201ENST00000516009 TYSND1Q2T9J0 566 aa7.63□□□□□ -1.19
SCARNA20.1-201ENST00000516009 HNRNPA1L2Q32P51 320 aaKnown RBP7.63□□□□□ -1.19
SCARNA20.1-201ENST00000516009 ZNF805Q5CZA5 627 aa7.63□□□□□ -1.19
SCARNA20.1-201ENST00000516009 ZNF789Q5FWF6 425 aa7.63□□□□□ -1.19
SCARNA20.1-201ENST00000516009 PPM1JQ5JR12 505 aa7.63□□□□□ -1.19
SCARNA20.1-201ENST00000516009 AARS2Q5JTZ9 985 aaKnown RBP7.63□□□□□ -1.19
SCARNA20.1-201ENST00000516009 RNF187Q5TA31 235 aaPredicted RBP7.63□□□□□ -1.19
SCARNA20.1-201ENST00000516009 CNSTQ6PJW8 725 aa7.63□□□□□ -1.19
SCARNA20.1-201ENST00000516009 SERPINA13PQ6UXR4 307 aa7.63□□□□□ -1.19
SCARNA20.1-201ENST00000516009 KYAT3Q6YP21 454 aaKnown RBP7.63□□□□□ -1.19
SCARNA20.1-201ENST00000516009 CDHR3Q6ZTQ4 885 aa7.63□□□□□ -1.19
SCARNA20.1-201ENST00000516009 MICALCLQ6ZW33 695 aa7.63□□□□□ -1.19
SCARNA20.1-201ENST00000516009 RAPH1Q70E73 1250 aa7.63□□□□□ -1.19
SCARNA20.1-201ENST00000516009 LDB1Q86U70 411 aaPredicted RBP7.63□□□□□ -1.19
SCARNA20.1-201ENST00000516009 LCA5Q86VQ0 697 aa7.63□□□□□ -1.19
SCARNA20.1-201ENST00000516009 BCAS4Q8TDM0 211 aa7.63□□□□□ -1.19
SCARNA20.1-201ENST00000516009 HCAR2Q8TDS4 363 aa7.63□□□□□ -1.19
SCARNA20.1-201ENST00000516009 LRRC8CQ8TDW0 803 aa7.63□□□□□ -1.19
SCARNA20.1-201ENST00000516009 OR8D1Q8WZ84 308 aa7.63□□□□□ -1.19
SCARNA20.1-201ENST00000516009 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.63□□□□□ -1.19
SCARNA20.1-201ENST00000516009 CHMP6Q96FZ7 201 aa7.63□□□□□ -1.19
SCARNA20.1-201ENST00000516009 ELMO2Q96JJ3 720 aa7.63□□□□□ -1.19
SCARNA20.1-201ENST00000516009 FAM161BQ96MY7 647 aa7.63□□□□□ -1.19
SCARNA20.1-201ENST00000516009 MCCC1Q96RQ3 725 aaPredicted RBP7.63□□□□□ -1.19
SCARNA20.1-201ENST00000516009 LYSMD1Q96S90 227 aa7.63□□□□□ -1.19
SCARNA20.1-201ENST00000516009 TCF12Q99081 682 aa7.63□□□□□ -1.19
SCARNA20.1-201ENST00000516009 C12orf65Q9H3J6 166 aaKnown RBP7.63□□□□□ -1.19
SCARNA20.1-201ENST00000516009 MTG2Q9H4K7 406 aa7.63□□□□□ -1.19
SCARNA20.1-201ENST00000516009 INTS10Q9NVR2 710 aaKnown RBP7.63□□□□□ -1.19
SCARNA20.1-201ENST00000516009 SLC17A7Q9P2U7 560 aa7.63□□□□□ -1.19
SCARNA20.1-201ENST00000516009 DKK3Q9UBP4 350 aa7.63□□□□□ -1.19
SCARNA20.1-201ENST00000516009 APPL1Q9UKG1 709 aa7.63□□□□□ -1.19
SCARNA20.1-201ENST00000516009 VPS9D1Q9Y2B5 631 aa7.63□□□□□ -1.19
SCARNA20.1-201ENST00000516009 ANKRD6Q9Y2G4 727 aa7.63□□□□□ -1.19
SCARNA20.1-201ENST00000516009 FNDC3AQ9Y2H6 1198 aaKnown RBP7.63□□□□□ -1.19
SCARNA20.1-201ENST00000516009 PLLPQ9Y342 182 aa7.63□□□□□ -1.19
SCARNA20.1-201ENST00000516009 SLC30A1Q9Y6M5 507 aa7.63□□□□□ -1.19
SCARNA20.1-201ENST00000516009 CKAP5Q14008 2032 aa7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 PLXNB3Q9ULL4 1909 aa7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 PLXNA2O75051 1894 aa7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 COL4A2P08572 1712 aa7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 A0A087X1B8 175 aa7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 GLYATL1P3A0A0U1RQE8 302 aa7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 A0A0U1RQS6 177 aa7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 UBA6A0AVT1 1052 aaPredicted RBP7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 WDR91A4D1P6 747 aa7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 GRXCR2A6NFK2 248 aa7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 A8MX80 341 aa7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 UPK3BL1B0FP48 263 aa7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 TCP11X1B4DZS4 312 aa7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 UPK3BL2E5RIL1 263 aa7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 KPNA3O00505 521 aaPredicted RBP7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 NDUFAB1O14561 156 aa7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 PHGDHO43175 533 aaKnown RBP7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 TOP3BO95985 862 aaKnown RBP7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 FAM107AO95990 144 aa7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 CTSLP07711 333 aa7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 DHRS4L1P0CG22 281 aa7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 NEFHP12036 1026 aa7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 COL6A2P12110 1019 aa7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 BMP1P13497 986 aa7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 HLA-EP13747 358 aa7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 ZNF30P17039 623 aa7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 ITGALP20701 1170 aa7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 KCNA5P22460 613 aa7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 VIPR1P32241 457 aa7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 SPAM1P38567 509 aa7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 ETV4P43268 484 aa7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 SERPINB4P48594 390 aa7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 PTPN5P54829 565 aa7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 TAS2R39P59534 338 aa7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 XIAPP98170 497 aa7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 MLLT1Q03111 559 aaPredicted RBP7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 CACNG1Q06432 222 aa7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 SMAD4Q13485 552 aaKnown RBP7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 PEX6Q13608 980 aa7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 ARHGEF7Q14155 803 aa7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 SEMA3AQ14563 771 aa7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 ELAVL3Q14576 367 aaKnown RBP7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 PDK4Q16654 411 aa7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 CDKN3Q16667 212 aa7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 AAK1Q2M2I8 961 aa7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 ZRANB3Q5FWF4 1079 aa7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 RBM20Q5T481 1227 aaKnown RBP7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 N4BP2L1Q5TBK1 243 aaPredicted RBP7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 HECTD2Q5U5R9 776 aa7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 ZDHHC20Q5W0Z9 365 aa7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 LRRC66Q68CR7 880 aa7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 NAIF1Q69YI7 327 aaPredicted RBP7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 FAM45BPQ6NSW5 357 aa7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 C16orf46Q6P387 395 aa7.62□□□□□ -1.19
SCARNA20.1-201ENST00000516009 CRTC1Q6UUV9 634 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms