RNA–Protein interactions for RNA: ENST00000514909.1

LDHBP3-201, Transcript of lactate dehydrogenase B pseudogene 3, humanhuman

BASIC

Gene LDHBP3, Length 822 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHBP3-201ENST00000514909 ITGADQ13349 1161 aa7.78□□□□□ -1.16
LDHBP3-201ENST00000514909 PROSER3Q2NL68 480 aa7.78□□□□□ -1.16
LDHBP3-201ENST00000514909 CCDC92Q53HC0 331 aaPredicted RBP7.78□□□□□ -1.16
LDHBP3-201ENST00000514909 ENTPD8Q5MY95 495 aa7.78□□□□□ -1.16
LDHBP3-201ENST00000514909 SUMO4Q6EEV6 95 aa7.78□□□□□ -1.16
LDHBP3-201ENST00000514909 DHRS7BQ6IAN0 325 aaPredicted RBP7.78□□□□□ -1.16
LDHBP3-201ENST00000514909 DPPA4Q7L190 304 aa7.78□□□□□ -1.16
LDHBP3-201ENST00000514909 HAPLN4Q86UW8 402 aa7.78□□□□□ -1.16
LDHBP3-201ENST00000514909 CEP57L1Q8IYX8 460 aa7.78□□□□□ -1.16
LDHBP3-201ENST00000514909 ADGRF4Q8IZF3 695 aa7.78□□□□□ -1.16
LDHBP3-201ENST00000514909 PARP16Q8N5Y8 322 aa7.78□□□□□ -1.16
LDHBP3-201ENST00000514909 PI4KAP1Q8N8J0 262 aa7.78□□□□□ -1.16
LDHBP3-201ENST00000514909 PNLDC1Q8NA58 520 aaKnown RBP7.78□□□□□ -1.16
LDHBP3-201ENST00000514909 OSR1Q8TAX0 266 aaPredicted RBP7.78□□□□□ -1.16
LDHBP3-201ENST00000514909 VCPIP1Q96JH7 1222 aa7.78□□□□□ -1.16
LDHBP3-201ENST00000514909 DACH2Q96NX9 599 aa7.78□□□□□ -1.16
LDHBP3-201ENST00000514909 EFHD1Q9BUP0 239 aa7.78□□□□□ -1.16
LDHBP3-201ENST00000514909 RTN4RQ9BZR6 473 aa7.78□□□□□ -1.16
LDHBP3-201ENST00000514909 GPR88Q9GZN0 384 aa7.78□□□□□ -1.16
LDHBP3-201ENST00000514909 DBNDD1Q9H9R9 158 aa7.78□□□□□ -1.16
LDHBP3-201ENST00000514909 SLC28A3Q9HAS3 691 aa7.78□□□□□ -1.16
LDHBP3-201ENST00000514909 MTMR10Q9NXD2 777 aa7.78□□□□□ -1.16
LDHBP3-201ENST00000514909 PLEKHB1Q9UF11 243 aaPredicted RBP7.78□□□□□ -1.16
LDHBP3-201ENST00000514909 ACAD8Q9UKU7 415 aa7.78□□□□□ -1.16
LDHBP3-201ENST00000514909 RAP2CQ9Y3L5 183 aa7.78□□□□□ -1.16
LDHBP3-201ENST00000514909 KIR2DS5A0A0G2JLQ3 304 aa7.77□□□□□ -1.17
LDHBP3-201ENST00000514909 MAGEB17A8MXT2 336 aa7.77□□□□□ -1.17
LDHBP3-201ENST00000514909 AKR1B15C9JRZ8 316 aaPredicted RBP7.77□□□□□ -1.17
LDHBP3-201ENST00000514909 KIR2DS3K7RE56 304 aa7.77□□□□□ -1.17
LDHBP3-201ENST00000514909 SYNCRIPO60506 623 aaKnown RBP7.77□□□□□ -1.17
LDHBP3-201ENST00000514909 PRLRP16471 622 aa7.77□□□□□ -1.17
LDHBP3-201ENST00000514909 GPD1P21695 349 aa7.77□□□□□ -1.17
LDHBP3-201ENST00000514909 MC5RP33032 325 aa7.77□□□□□ -1.17
LDHBP3-201ENST00000514909 CCR10P46092 362 aa7.77□□□□□ -1.17
LDHBP3-201ENST00000514909 MMP14P50281 582 aa7.77□□□□□ -1.17
LDHBP3-201ENST00000514909 POLGP54098 1239 aaPredicted RBP7.77□□□□□ -1.17
LDHBP3-201ENST00000514909 LPIN1Q14693 890 aa7.77□□□□□ -1.17
LDHBP3-201ENST00000514909 E2F5Q15329 346 aa7.77□□□□□ -1.17
LDHBP3-201ENST00000514909 ARMC4Q5T2S8 1044 aa7.77□□□□□ -1.17
LDHBP3-201ENST00000514909 SUSD1Q6UWL2 747 aa7.77□□□□□ -1.17
LDHBP3-201ENST00000514909 PQLC2Q6ZP29 291 aa7.77□□□□□ -1.17
LDHBP3-201ENST00000514909 FAM57BQ71RH2 274 aa7.77□□□□□ -1.17
LDHBP3-201ENST00000514909 SFTPA2Q8IWL1 248 aa7.77□□□□□ -1.17
LDHBP3-201ENST00000514909 NUP93Q8N1F7 819 aa7.77□□□□□ -1.17
LDHBP3-201ENST00000514909 NAP1L5Q96NT1 182 aaPredicted RBP7.77□□□□□ -1.17
LDHBP3-201ENST00000514909 NUDCD1Q96RS6 583 aa7.77□□□□□ -1.17
LDHBP3-201ENST00000514909 ACOX2Q99424 681 aa7.77□□□□□ -1.17
LDHBP3-201ENST00000514909 NUP85Q9BW27 656 aa7.77□□□□□ -1.17
LDHBP3-201ENST00000514909 MAGIXQ9H6Y5 334 aa7.77□□□□□ -1.17
LDHBP3-201ENST00000514909 CPNE5Q9HCH3 593 aa7.77□□□□□ -1.17
LDHBP3-201ENST00000514909 UTS2RQ9UKP6 389 aa7.77□□□□□ -1.17
LDHBP3-201ENST00000514909 NFE2L3Q9Y4A8 694 aa7.77□□□□□ -1.17
LDHBP3-201ENST00000514909 CLIC4Q9Y696 253 aa7.77□□□□□ -1.17
LDHBP3-201ENST00000514909 TMEM202A6NGA9 273 aa7.76□□□□□ -1.17
LDHBP3-201ENST00000514909 C1QTNF3-AMACRE9PGA6 284 aa7.76□□□□□ -1.17
LDHBP3-201ENST00000514909 SMIM22K7EJ46 135 aa7.76□□□□□ -1.17
LDHBP3-201ENST00000514909 SIX3O95343 332 aaPredicted RBP7.76□□□□□ -1.17
LDHBP3-201ENST00000514909 C6P13671 934 aa7.76□□□□□ -1.17
LDHBP3-201ENST00000514909 ENO3P13929 434 aaPredicted RBP7.76□□□□□ -1.17
LDHBP3-201ENST00000514909 ATP5F1P24539 256 aaPredicted RBP7.76□□□□□ -1.17
LDHBP3-201ENST00000514909 NPY4RP50391 375 aa7.76□□□□□ -1.17
LDHBP3-201ENST00000514909 TMF1P82094 1093 aa7.76□□□□□ -1.17
LDHBP3-201ENST00000514909 EFEMP1Q12805 493 aa7.76□□□□□ -1.17
LDHBP3-201ENST00000514909 TNIP1Q15025 636 aa7.76□□□□□ -1.17
LDHBP3-201ENST00000514909 ARHGEF6Q15052 776 aa7.76□□□□□ -1.17
LDHBP3-201ENST00000514909 LETM2Q2VYF4 491 aa7.76□□□□□ -1.17
LDHBP3-201ENST00000514909 CBWD6Q4V339 395 aa7.76□□□□□ -1.17
LDHBP3-201ENST00000514909 CBWD3Q5JTY5 395 aa7.76□□□□□ -1.17
LDHBP3-201ENST00000514909 PRAMEF17Q5VTA0 474 aa7.76□□□□□ -1.17
LDHBP3-201ENST00000514909 TMEM198Q66K66 360 aa7.76□□□□□ -1.17
LDHBP3-201ENST00000514909 CAVIN1Q6NZI2 390 aaKnown RBP7.76□□□□□ -1.17
LDHBP3-201ENST00000514909 CCDC91Q7Z6B0 441 aa7.76□□□□□ -1.17
LDHBP3-201ENST00000514909 AMIGO2Q86SJ2 522 aa7.76□□□□□ -1.17
LDHBP3-201ENST00000514909 RBFAQ8N0V3 343 aa7.76□□□□□ -1.17
LDHBP3-201ENST00000514909 LRRC57Q8N9N7 239 aa7.76□□□□□ -1.17
LDHBP3-201ENST00000514909 OR8K5Q8NH50 307 aa7.76□□□□□ -1.17
LDHBP3-201ENST00000514909 ZNF419Q96HQ0 510 aaPredicted RBP7.76□□□□□ -1.17
LDHBP3-201ENST00000514909 EGLN2Q96KS0 407 aa7.76□□□□□ -1.17
LDHBP3-201ENST00000514909 DNAI2Q9GZS0 605 aa7.76□□□□□ -1.17
LDHBP3-201ENST00000514909 SPATC1LQ9H0A9 340 aa7.76□□□□□ -1.17
LDHBP3-201ENST00000514909 COPS7BQ9H9Q2 264 aaPredicted RBP7.76□□□□□ -1.17
LDHBP3-201ENST00000514909 CWC25Q9NXE8 425 aaPredicted RBP7.76□□□□□ -1.17
LDHBP3-201ENST00000514909 DDX25Q9UHL0 483 aaKnown RBP7.76□□□□□ -1.17
LDHBP3-201ENST00000514909 AGO2Q9UKV8 859 aaKnown RBP7.76□□□□□ -1.17
LDHBP3-201ENST00000514909 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.76□□□□□ -1.17
LDHBP3-201ENST00000514909 C1orf226A1L170 272 aa7.75□□□□□ -1.17
LDHBP3-201ENST00000514909 F8W810 466 aa7.75□□□□□ -1.17
LDHBP3-201ENST00000514909 ATP2A1O14983 1001 aa7.75□□□□□ -1.17
LDHBP3-201ENST00000514909 SMAD9O15198 467 aaKnown RBP7.75□□□□□ -1.17
LDHBP3-201ENST00000514909 PRPF4O43172 522 aaKnown RBP eCLIP7.75□□□□□ -1.17
LDHBP3-201ENST00000514909 STX6O43752 255 aa7.75□□□□□ -1.17
LDHBP3-201ENST00000514909 TADA2AO75478 443 aa7.75□□□□□ -1.17
LDHBP3-201ENST00000514909 FTCDO95954 541 aa7.75□□□□□ -1.17
LDHBP3-201ENST00000514909 NHLRC4P0CG21 123 aaPredicted RBP7.75□□□□□ -1.17
LDHBP3-201ENST00000514909 TFPIP10646 304 aa7.75□□□□□ -1.17
LDHBP3-201ENST00000514909 CD58P19256 250 aa7.75□□□□□ -1.17
LDHBP3-201ENST00000514909 SIRPAP78324 504 aa7.75□□□□□ -1.17
LDHBP3-201ENST00000514909 CFHR1Q03591 330 aa7.75□□□□□ -1.17
LDHBP3-201ENST00000514909 HIST2H2BCQ6DN03 193 aa7.75□□□□□ -1.17
LDHBP3-201ENST00000514909 HIST2H2BDQ6DRA6 164 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms