RNA–Protein interactions for RNA: ENST00000513525.1

CCL28-203, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best) BASIC

Gene CCL28, Length 1,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-203ENST00000513525 RNF8O76064 485 aa9.92□□□□□ -0.82
CCL28-203ENST00000513525 ECEL1O95672 775 aa9.92□□□□□ -0.82
CCL28-203ENST00000513525 SYF2O95926 243 aaKnown RBP9.92□□□□□ -0.82
CCL28-203ENST00000513525 CSF2P04141 144 aa9.92□□□□□ -0.82
CCL28-203ENST00000513525 FAM153BP0C7A2 387 aa9.92□□□□□ -0.82
CCL28-203ENST00000513525 CKMT1AP12532 417 aa9.92□□□□□ -0.82
CCL28-203ENST00000513525 TAS2R40P59535 323 aa9.92□□□□□ -0.82
CCL28-203ENST00000513525 YPEL5P62699 121 aa9.92□□□□□ -0.82
CCL28-203ENST00000513525 E2F1Q01094 437 aa9.92□□□□□ -0.82
CCL28-203ENST00000513525 CYP4F3Q08477 520 aa9.92□□□□□ -0.82
CCL28-203ENST00000513525 CYTH1Q15438 398 aa9.92□□□□□ -0.82
CCL28-203ENST00000513525 FAM153CQ494X1 144 aa9.92□□□□□ -0.82
CCL28-203ENST00000513525 CCDC137Q6PK04 289 aaKnown RBP9.92□□□□□ -0.82
CCL28-203ENST00000513525 CYP4V2Q6ZWL3 525 aaPredicted RBP9.92□□□□□ -0.82
CCL28-203ENST00000513525 TTC7BQ86TV6 843 aa9.92□□□□□ -0.82
CCL28-203ENST00000513525 IQCKQ8N0W5 287 aa9.92□□□□□ -0.82
CCL28-203ENST00000513525 TSEN2Q8NCE0 465 aaKnown RBP9.92□□□□□ -0.82
CCL28-203ENST00000513525 GRK7Q8WTQ7 553 aa9.92□□□□□ -0.82
CCL28-203ENST00000513525 CENPTQ96BT3 561 aa9.92□□□□□ -0.82
CCL28-203ENST00000513525 NXPE2Q96DL1 559 aa9.92□□□□□ -0.82
CCL28-203ENST00000513525 PEBP4Q96S96 227 aa9.92□□□□□ -0.82
CCL28-203ENST00000513525 NCAPGQ9BPX3 1015 aa9.92□□□□□ -0.82
CCL28-203ENST00000513525 DUSP23Q9BVJ7 150 aa9.92□□□□□ -0.82
CCL28-203ENST00000513525 KRTAP4-6Q9BYQ5 205 aa9.92□□□□□ -0.82
CCL28-203ENST00000513525 NRSN2Q9GZP1 204 aa9.92□□□□□ -0.82
CCL28-203ENST00000513525 DHX35Q9H5Z1 703 aaKnown RBP9.92□□□□□ -0.82
CCL28-203ENST00000513525 USP29Q9HBJ7 922 aa9.92□□□□□ -0.82
CCL28-203ENST00000513525 GPATCH2LQ9NWQ4 482 aa9.92□□□□□ -0.82
CCL28-203ENST00000513525 DNAJC28Q9NX36 388 aa9.92□□□□□ -0.82
CCL28-203ENST00000513525 PSD3Q9NYI0 1048 aa9.92□□□□□ -0.82
CCL28-203ENST00000513525 UBA2Q9UBT2 640 aaPredicted RBP9.92□□□□□ -0.82
CCL28-203ENST00000513525 FAM153AQ9UHL3 310 aa9.92□□□□□ -0.82
CCL28-203ENST00000513525 CSNK1G3Q9Y6M4 447 aa9.92□□□□□ -0.82
CCL28-203ENST00000513525 IGSF10Q6WRI0 2623 aa9.91□□□□□ -0.82
CCL28-203ENST00000513525 PTPRQQ9UMZ3 2332 aa9.91□□□□□ -0.82
CCL28-203ENST00000513525 UNC13CQ8NB66 2214 aa9.91□□□□□ -0.82
CCL28-203ENST00000513525 ARHGAP42A6NI28 874 aa9.91□□□□□ -0.82
CCL28-203ENST00000513525 LRCH4O75427 683 aa9.91□□□□□ -0.82
CCL28-203ENST00000513525 GP1BAP07359 652 aa9.91□□□□□ -0.82
CCL28-203ENST00000513525 TIMP2P16035 220 aa9.91□□□□□ -0.82
CCL28-203ENST00000513525 IGFALSP35858 605 aa9.91□□□□□ -0.82
CCL28-203ENST00000513525 CSNK1DP48730 415 aa9.91□□□□□ -0.82
CCL28-203ENST00000513525 HCAR3P49019 387 aa9.91□□□□□ -0.82
CCL28-203ENST00000513525 DAB2P98082 770 aa9.91□□□□□ -0.82
CCL28-203ENST00000513525 ELP6Q0PNE2 266 aa9.91□□□□□ -0.82
CCL28-203ENST00000513525 TARDBPQ13148 414 aaKnown RBP eCLIP9.91□□□□□ -0.82
CCL28-203ENST00000513525 KLF1Q13351 362 aaPredicted RBP9.91□□□□□ -0.82
CCL28-203ENST00000513525 PDE1CQ14123 709 aaPredicted RBP9.91□□□□□ -0.82
CCL28-203ENST00000513525 RTP5Q14D33 572 aa9.91□□□□□ -0.82
CCL28-203ENST00000513525 TRADDQ15628 312 aa9.91□□□□□ -0.82
CCL28-203ENST00000513525 CCNG2Q16589 344 aa9.91□□□□□ -0.82
CCL28-203ENST00000513525 CA9Q16790 459 aa9.91□□□□□ -0.82
CCL28-203ENST00000513525 TMEM52BQ4KMG9 183 aa9.91□□□□□ -0.82
CCL28-203ENST00000513525 MSS51Q4VC12 460 aa9.91□□□□□ -0.82
CCL28-203ENST00000513525 AFMIDQ63HM1 303 aa9.91□□□□□ -0.82
CCL28-203ENST00000513525 TTC27Q6P3X3 843 aa9.91□□□□□ -0.82
CCL28-203ENST00000513525 RFX8Q6ZV50 586 aa9.91□□□□□ -0.82
CCL28-203ENST00000513525 DCBLD1Q8N8Z6 715 aa9.91□□□□□ -0.82
CCL28-203ENST00000513525 ZNF548Q8NEK5 533 aaPredicted RBP9.91□□□□□ -0.82
CCL28-203ENST00000513525 CXorf40AQ8TE69 158 aa9.91□□□□□ -0.82
CCL28-203ENST00000513525 TBATAQ96M53 351 aa9.91□□□□□ -0.82
CCL28-203ENST00000513525 ZNF641Q96N77 438 aaPredicted RBP9.91□□□□□ -0.82
CCL28-203ENST00000513525 TUBGCP5Q96RT8 1024 aa9.91□□□□□ -0.82
CCL28-203ENST00000513525 KCTD15Q96SI1 283 aaPredicted RBP9.91□□□□□ -0.82
CCL28-203ENST00000513525 TRIM51Q9BSJ1 452 aa9.91□□□□□ -0.82
CCL28-203ENST00000513525 C1QTNF7Q9BXJ2 289 aa9.91□□□□□ -0.82
CCL28-203ENST00000513525 OSBPL8Q9BZF1 889 aa9.91□□□□□ -0.82
CCL28-203ENST00000513525 SLC39A8Q9C0K1 460 aa9.91□□□□□ -0.82
CCL28-203ENST00000513525 EVA1BQ9NVM1 165 aa9.91□□□□□ -0.82
CCL28-203ENST00000513525 RALYQ9UKM9 306 aaKnown RBP9.91□□□□□ -0.82
CCL28-203ENST00000513525 EFR3BQ9Y2G0 817 aa9.91□□□□□ -0.82
CCL28-203ENST00000513525 RAXQ9Y2V3 346 aa9.91□□□□□ -0.82
CCL28-203ENST00000513525 A0A087WV48 116 aa9.9□□□□□ -0.82
CCL28-203ENST00000513525 LY6G6EA0A0G2JKS1 128 aa9.9□□□□□ -0.82
CCL28-203ENST00000513525 TCRBV7S2A1N4TA0A589 114 aa9.9□□□□□ -0.82
CCL28-203ENST00000513525 J3KR12 359 aa9.9□□□□□ -0.82
CCL28-203ENST00000513525 K7ESM1 405 aa9.9□□□□□ -0.82
CCL28-203ENST00000513525 INSIG1O15503 277 aa9.9□□□□□ -0.82
CCL28-203ENST00000513525 FFAR2O15552 330 aa9.9□□□□□ -0.82
CCL28-203ENST00000513525 PRPSAP2O60256 369 aa9.9□□□□□ -0.82
CCL28-203ENST00000513525 PPFIA2O75334 1257 aa9.9□□□□□ -0.82
CCL28-203ENST00000513525 PIGNO95427 931 aa9.9□□□□□ -0.82
CCL28-203ENST00000513525 GAS8O95995 478 aa9.9□□□□□ -0.82
CCL28-203ENST00000513525 KRT7P08729 469 aa9.9□□□□□ -0.82
CCL28-203ENST00000513525 ERCC2P18074 760 aa9.9□□□□□ -0.82
CCL28-203ENST00000513525 MIPP30301 263 aa9.9□□□□□ -0.82
CCL28-203ENST00000513525 SSR1P43307 286 aaKnown RBP9.9□□□□□ -0.82
CCL28-203ENST00000513525 DUSP3P51452 185 aaPredicted RBP9.9□□□□□ -0.82
CCL28-203ENST00000513525 CLDN6P56747 220 aa9.9□□□□□ -0.82
CCL28-203ENST00000513525 EIF2B5Q13144 721 aaKnown RBP9.9□□□□□ -0.82
CCL28-203ENST00000513525 PTK2BQ14289 1009 aa9.9□□□□□ -0.82
CCL28-203ENST00000513525 RFTN1Q14699 578 aaPredicted RBP9.9□□□□□ -0.82
CCL28-203ENST00000513525 AGERQ15109 404 aa9.9□□□□□ -0.82
CCL28-203ENST00000513525 HADHQ16836 314 aaKnown RBP9.9□□□□□ -0.82
CCL28-203ENST00000513525 UGP2Q16851 508 aa9.9□□□□□ -0.82
CCL28-203ENST00000513525 ZNF542PQ5EBM4 170 aa9.9□□□□□ -0.82
CCL28-203ENST00000513525 LRRC73Q5JTD7 316 aa9.9□□□□□ -0.82
CCL28-203ENST00000513525 TPRG1LQ5T0D9 272 aa9.9□□□□□ -0.82
CCL28-203ENST00000513525 ZCCHC8Q6NZY4 707 aaKnown RBP9.9□□□□□ -0.82
CCL28-203ENST00000513525 BRAT1Q6PJG6 821 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms