RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 CDO1Q16878 200 aa13.91□□□□□ -0.18
SPCS3-204ENST00000513139 CCDC14Q49A88 953 aa13.91□□□□□ -0.18
SPCS3-204ENST00000513139 RAB6CQ53S08 254 aa13.91□□□□□ -0.18
SPCS3-204ENST00000513139 C2CD6Q53TS8 623 aa13.91□□□□□ -0.18
SPCS3-204ENST00000513139 FHL5Q5TD97 284 aa13.91□□□□□ -0.18
SPCS3-204ENST00000513139 NKAIN2Q5VXU1 208 aa13.91□□□□□ -0.18
SPCS3-204ENST00000513139 ZSWIM9Q86XI8 627 aa13.91□□□□□ -0.18
SPCS3-204ENST00000513139 CAMK1DQ8IU85 385 aa13.91□□□□□ -0.18
SPCS3-204ENST00000513139 EMC1Q8N766 993 aa13.91□□□□□ -0.18
SPCS3-204ENST00000513139 GALNT11Q8NCW6 608 aa13.91□□□□□ -0.18
SPCS3-204ENST00000513139 STARD8Q92502 1023 aa13.91□□□□□ -0.18
SPCS3-204ENST00000513139 CENPIQ92674 756 aaPredicted RBP13.91□□□□□ -0.18
SPCS3-204ENST00000513139 NTAN1Q96AB6 310 aa13.91□□□□□ -0.18
SPCS3-204ENST00000513139 ECHDC3Q96DC8 303 aa13.91□□□□□ -0.18
SPCS3-204ENST00000513139 BPIFA3Q9BQP9 254 aa13.91□□□□□ -0.18
SPCS3-204ENST00000513139 MAGEB5Q9BZ81 275 aa13.91□□□□□ -0.18
SPCS3-204ENST00000513139 RAB6CQ9H0N0 254 aa13.91□□□□□ -0.18
SPCS3-204ENST00000513139 HSD3B7Q9H2F3 369 aa13.91□□□□□ -0.18
SPCS3-204ENST00000513139 ATP13A3Q9H7F0 1226 aa13.91□□□□□ -0.18
SPCS3-204ENST00000513139 PRDM8Q9NQV8 689 aa13.91□□□□□ -0.18
SPCS3-204ENST00000513139 METTL5Q9NRN9 209 aaKnown RBP13.91□□□□□ -0.18
SPCS3-204ENST00000513139 PHPT1Q9NRX4 125 aaPredicted RBP13.91□□□□□ -0.18
SPCS3-204ENST00000513139 KCNK4Q9NYG8 393 aa13.91□□□□□ -0.18
SPCS3-204ENST00000513139 UBA2Q9UBT2 640 aaPredicted RBP13.91□□□□□ -0.18
SPCS3-204ENST00000513139 KCNMB2Q9Y691 235 aa13.91□□□□□ -0.18
SPCS3-204ENST00000513139 WASH4PA8MWX3 477 aa13.9□□□□□ -0.18
SPCS3-204ENST00000513139 TEX33O43247 280 aa13.9□□□□□ -0.18
SPCS3-204ENST00000513139 VPS4BO75351 444 aa13.9□□□□□ -0.18
SPCS3-204ENST00000513139 FUCA1P04066 466 aa13.9□□□□□ -0.18
SPCS3-204ENST00000513139 GM2AP17900 193 aa13.9□□□□□ -0.18
SPCS3-204ENST00000513139 EPHB2P29323 1055 aa13.9□□□□□ -0.18
SPCS3-204ENST00000513139 MTIF2P46199 727 aaKnown RBP13.9□□□□□ -0.18
SPCS3-204ENST00000513139 COPB1P53618 953 aaKnown RBP13.9□□□□□ -0.18
SPCS3-204ENST00000513139 C15orf59Q2T9L4 293 aaPredicted RBP13.9□□□□□ -0.18
SPCS3-204ENST00000513139 CDKAL1Q5VV42 579 aa13.9□□□□□ -0.18
SPCS3-204ENST00000513139 CAPRIN2Q6IMN6 1127 aaKnown RBP13.9□□□□□ -0.18
SPCS3-204ENST00000513139 DPPA4Q7L190 304 aa13.9□□□□□ -0.18
SPCS3-204ENST00000513139 TIPARPQ7Z3E1 657 aaKnown RBP13.9□□□□□ -0.18
SPCS3-204ENST00000513139 ARHGAP22Q7Z5H3 698 aa13.9□□□□□ -0.18
SPCS3-204ENST00000513139 LUZP1Q86V48 1076 aa13.9□□□□□ -0.18
SPCS3-204ENST00000513139 CCDC13Q8IYE1 715 aa13.9□□□□□ -0.18
SPCS3-204ENST00000513139 UMODL1-AS1Q8N2C9 162 aa13.9□□□□□ -0.18
SPCS3-204ENST00000513139 SSC4DQ8WTU2 575 aa13.9□□□□□ -0.18
SPCS3-204ENST00000513139 PATE1Q8WXA2 126 aa13.9□□□□□ -0.18
SPCS3-204ENST00000513139 RXFP2Q8WXD0 754 aa13.9□□□□□ -0.18
SPCS3-204ENST00000513139 TEX101Q9BY14 249 aa13.9□□□□□ -0.18
SPCS3-204ENST00000513139 FRMD8Q9BZ67 464 aaPredicted RBP13.9□□□□□ -0.18
SPCS3-204ENST00000513139 TSPY26PQ9H489 355 aa13.9□□□□□ -0.18
SPCS3-204ENST00000513139 CUEDC1Q9NWM3 386 aaPredicted RBP13.9□□□□□ -0.18
SPCS3-204ENST00000513139 TMEM9Q9P0T7 183 aa13.9□□□□□ -0.18
SPCS3-204ENST00000513139 VPS4AQ9UN37 437 aa13.9□□□□□ -0.18
SPCS3-204ENST00000513139 ZNF106Q9H2Y7 1883 aaKnown RBP13.9□□□□□ -0.18
SPCS3-204ENST00000513139 TNRC6AQ8NDV7 1962 aaKnown RBP13.9□□□□□ -0.18
SPCS3-204ENST00000513139 C2CD4BA6NLJ0 364 aa13.89□□□□□ -0.19
SPCS3-204ENST00000513139 PRKCGP05129 697 aa13.89□□□□□ -0.19
SPCS3-204ENST00000513139 MPSTP25325 297 aa13.89□□□□□ -0.19
SPCS3-204ENST00000513139 AK4P27144 223 aaPredicted RBP13.89□□□□□ -0.19
SPCS3-204ENST00000513139 STAT5AP42229 794 aa13.89□□□□□ -0.19
SPCS3-204ENST00000513139 FASLGP48023 281 aa13.89□□□□□ -0.19
SPCS3-204ENST00000513139 HDAC4P56524 1084 aa13.89□□□□□ -0.19
SPCS3-204ENST00000513139 NOMO3P69849 1222 aa13.89□□□□□ -0.19
SPCS3-204ENST00000513139 CTBSQ01459 385 aa13.89□□□□□ -0.19
SPCS3-204ENST00000513139 MAP7Q14244 749 aa13.89□□□□□ -0.19
SPCS3-204ENST00000513139 TCP11X2Q5H9J9 407 aa13.89□□□□□ -0.19
SPCS3-204ENST00000513139 SLC30A9Q6PML9 568 aa13.89□□□□□ -0.19
SPCS3-204ENST00000513139 WDR74Q6RFH5 385 aaPredicted RBP13.89□□□□□ -0.19
SPCS3-204ENST00000513139 KDELC2Q7Z4H8 507 aa13.89□□□□□ -0.19
SPCS3-204ENST00000513139 SRLQ86TD4 932 aa13.89□□□□□ -0.19
SPCS3-204ENST00000513139 HEATR4Q86WZ0 1026 aa13.89□□□□□ -0.19
SPCS3-204ENST00000513139 UNC5BQ8IZJ1 945 aa13.89□□□□□ -0.19
SPCS3-204ENST00000513139 CCDC185Q8N715 623 aa13.89□□□□□ -0.19
SPCS3-204ENST00000513139 CPA5Q8WXQ8 436 aa13.89□□□□□ -0.19
SPCS3-204ENST00000513139 COQ10AQ96MF6 247 aa13.89□□□□□ -0.19
SPCS3-204ENST00000513139 PDFQ9HBH1 243 aa13.89□□□□□ -0.19
SPCS3-204ENST00000513139 DONSONQ9NYP3 566 aa13.89□□□□□ -0.19
SPCS3-204ENST00000513139 SUFUQ9UMX1 484 aa13.89□□□□□ -0.19
SPCS3-204ENST00000513139 PCDHB3Q9Y5E6 796 aa13.89□□□□□ -0.19
SPCS3-204ENST00000513139 ST14Q9Y5Y6 855 aa13.89□□□□□ -0.19
SPCS3-204ENST00000513139 SMTNL1A8MU46 457 aa13.88□□□□□ -0.19
SPCS3-204ENST00000513139 STK17BO94768 372 aa13.88□□□□□ -0.19
SPCS3-204ENST00000513139 DLGAP3O95886 979 aa13.88□□□□□ -0.19
SPCS3-204ENST00000513139 ATP1A3P13637 1013 aa13.88□□□□□ -0.19
SPCS3-204ENST00000513139 NOP2P46087 812 aaKnown RBP13.88□□□□□ -0.19
SPCS3-204ENST00000513139 GNPDA1P46926 289 aa13.88□□□□□ -0.19
SPCS3-204ENST00000513139 ACOX1Q15067 660 aa13.88□□□□□ -0.19
SPCS3-204ENST00000513139 C16orf46Q6P387 395 aa13.88□□□□□ -0.19
SPCS3-204ENST00000513139 ASB18Q6ZVZ8 466 aa13.88□□□□□ -0.19
SPCS3-204ENST00000513139 SLFN11Q7Z7L1 901 aa13.88□□□□□ -0.19
SPCS3-204ENST00000513139 FAM114A1Q8IWE2 563 aa13.88□□□□□ -0.19
SPCS3-204ENST00000513139 PELI3Q8N2H9 469 aa13.88□□□□□ -0.19
SPCS3-204ENST00000513139 ESX1Q8N693 406 aa13.88□□□□□ -0.19
SPCS3-204ENST00000513139 OR10G6Q8NH81 332 aa13.88□□□□□ -0.19
SPCS3-204ENST00000513139 AHCYL2Q96HN2 611 aaKnown RBP13.88□□□□□ -0.19
SPCS3-204ENST00000513139 TUBGCP2Q9BSJ2 902 aa13.88□□□□□ -0.19
SPCS3-204ENST00000513139 CATSPERBQ9H7T0 1116 aa13.88□□□□□ -0.19
SPCS3-204ENST00000513139 TAB2Q9NYJ8 693 aa13.88□□□□□ -0.19
SPCS3-204ENST00000513139 SLC17A4Q9Y2C5 497 aa13.88□□□□□ -0.19
SPCS3-204ENST00000513139 PRAMEF11O60813 436 aa13.87□□□□□ -0.19
SPCS3-204ENST00000513139 IVLP07476 585 aa13.87□□□□□ -0.19
SPCS3-204ENST00000513139 HOXB1P14653 301 aaPredicted RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms