RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 OSBPL7Q9BZF2 842 aa13.1□□□□□ -0.31
PCDHA4-202ENST00000512229 FAM159BA6NKW6 160 aa13.1□□□□□ -0.31
PCDHA4-202ENST00000512229 CNTN1Q12860 1018 aa13.1□□□□□ -0.31
PCDHA4-202ENST00000512229 FAM46CQ5VWP2 391 aa13.1□□□□□ -0.31
PCDHA4-202ENST00000512229 RNF19BQ6ZMZ0 732 aa13.1□□□□□ -0.31
PCDHA4-202ENST00000512229 CAAP1Q9H8G2 361 aa13.1□□□□□ -0.31
PCDHA4-202ENST00000512229 COPS7BQ9H9Q2 264 aaPredicted RBP13.1□□□□□ -0.31
PCDHA4-202ENST00000512229 CHCHD3Q9NX63 227 aaKnown RBP13.1□□□□□ -0.31
PCDHA4-202ENST00000512229 ZNHIT2Q9UHR6 403 aa13.1□□□□□ -0.31
PCDHA4-202ENST00000512229 SNX6Q9UNH7 406 aa13.1□□□□□ -0.31
PCDHA4-202ENST00000512229 C2orf71A6NGG8 1288 aa13.1□□□□□ -0.31
PCDHA4-202ENST00000512229 FAM72CH0Y354 149 aa13.1□□□□□ -0.31
PCDHA4-202ENST00000512229 PRAMEF1O95521 474 aa13.1□□□□□ -0.31
PCDHA4-202ENST00000512229 FASP25445 335 aa13.1□□□□□ -0.31
PCDHA4-202ENST00000512229 ACVRL1P37023 503 aa13.1□□□□□ -0.31
PCDHA4-202ENST00000512229 TM4SF4P48230 202 aa13.1□□□□□ -0.31
PCDHA4-202ENST00000512229 SLC18A1P54219 525 aa13.1□□□□□ -0.31
PCDHA4-202ENST00000512229 BNIP1Q12981 228 aa13.1□□□□□ -0.31
PCDHA4-202ENST00000512229 PRKG2Q13237 762 aa13.1□□□□□ -0.31
PCDHA4-202ENST00000512229 PLCL1Q15111 1095 aa13.1□□□□□ -0.31
PCDHA4-202ENST00000512229 CPSF6Q16630 551 aaKnown RBP eCLIP13.1□□□□□ -0.31
PCDHA4-202ENST00000512229 MS4A13Q5J8X5 152 aa13.1□□□□□ -0.31
PCDHA4-202ENST00000512229 FAM72AQ5TYM5 149 aa13.1□□□□□ -0.31
PCDHA4-202ENST00000512229 FAM72DQ6L9T8 149 aa13.1□□□□□ -0.31
PCDHA4-202ENST00000512229 FAM72BQ86X60 149 aa13.1□□□□□ -0.31
PCDHA4-202ENST00000512229 TIFAQ96CG3 184 aa13.1□□□□□ -0.31
PCDHA4-202ENST00000512229 SEPHS2Q99611 448 aa13.1□□□□□ -0.31
PCDHA4-202ENST00000512229 ACSS2Q9NR19 701 aa13.1□□□□□ -0.31
PCDHA4-202ENST00000512229 ARL8BQ9NVJ2 186 aa13.1□□□□□ -0.31
PCDHA4-202ENST00000512229 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.1□□□□□ -0.31
PCDHA4-202ENST00000512229 VAV1P15498 845 aa13.1□□□□□ -0.31
PCDHA4-202ENST00000512229 ACAP2Q15057 778 aa13.1□□□□□ -0.31
PCDHA4-202ENST00000512229 CHST9Q7L1S5 443 aa13.1□□□□□ -0.31
PCDHA4-202ENST00000512229 GPRIN1Q7Z2K8 1008 aa13.1□□□□□ -0.31
PCDHA4-202ENST00000512229 AGAP11Q8TF27 550 aa13.1□□□□□ -0.31
PCDHA4-202ENST00000512229 MTFMTQ96DP5 389 aaKnown RBP13.1□□□□□ -0.31
PCDHA4-202ENST00000512229 PPP3R2Q96LZ3 170 aa13.1□□□□□ -0.31
PCDHA4-202ENST00000512229 ELAC1Q9H777 363 aaKnown RBP13.1□□□□□ -0.31
PCDHA4-202ENST00000512229 SLC17A6Q9P2U8 582 aa13.1□□□□□ -0.31
PCDHA4-202ENST00000512229 ZMYND8Q9ULU4 1186 aaPredicted RBP13.1□□□□□ -0.31
PCDHA4-202ENST00000512229 MAGEA13PA6NCF6 341 aa13.09□□□□□ -0.31
PCDHA4-202ENST00000512229 ALDH1A2O94788 518 aa13.09□□□□□ -0.31
PCDHA4-202ENST00000512229 FCGR1AP12314 374 aa13.09□□□□□ -0.31
PCDHA4-202ENST00000512229 SPAM1P38567 509 aa13.09□□□□□ -0.31
PCDHA4-202ENST00000512229 SLC1A2P43004 574 aa13.09□□□□□ -0.31
PCDHA4-202ENST00000512229 CACNG1Q06432 222 aa13.09□□□□□ -0.31
PCDHA4-202ENST00000512229 ZBTB17Q13105 803 aa13.09□□□□□ -0.31
PCDHA4-202ENST00000512229 ATXN7L2Q5T6C5 722 aaPredicted RBP13.09□□□□□ -0.31
PCDHA4-202ENST00000512229 ZYG11AQ6WRX3 759 aa13.09□□□□□ -0.31
PCDHA4-202ENST00000512229 MRPL10Q7Z7H8 261 aaKnown RBP13.09□□□□□ -0.31
PCDHA4-202ENST00000512229 IGSF21Q96ID5 467 aa13.09□□□□□ -0.31
PCDHA4-202ENST00000512229 C11orf84Q9BUA3 381 aaPredicted RBP13.09□□□□□ -0.31
PCDHA4-202ENST00000512229 ADAM7Q9H2U9 754 aa13.09□□□□□ -0.31
PCDHA4-202ENST00000512229 NMUR1Q9HB89 426 aa13.09□□□□□ -0.31
PCDHA4-202ENST00000512229 FKBPLQ9UIM3 349 aa13.09□□□□□ -0.31
PCDHA4-202ENST00000512229 PACSIN3Q9UKS6 424 aa13.09□□□□□ -0.31
PCDHA4-202ENST00000512229 DDX60LQ5H9U9 1706 aaKnown RBP13.09□□□□□ -0.31
PCDHA4-202ENST00000512229 HAS3O00219 553 aa13.09□□□□□ -0.31
PCDHA4-202ENST00000512229 CNTN5O94779 1100 aa13.09□□□□□ -0.31
PCDHA4-202ENST00000512229 NFATC1O95644 943 aa13.09□□□□□ -0.31
PCDHA4-202ENST00000512229 RAB6CQ53S08 254 aa13.09□□□□□ -0.31
PCDHA4-202ENST00000512229 C7orf61Q8IZ16 206 aa13.09□□□□□ -0.31
PCDHA4-202ENST00000512229 ING5Q8WYH8 240 aa13.09□□□□□ -0.31
PCDHA4-202ENST00000512229 VPS33AQ96AX1 596 aa13.09□□□□□ -0.31
PCDHA4-202ENST00000512229 REPS1Q96D71 796 aa13.09□□□□□ -0.31
PCDHA4-202ENST00000512229 ANKRD27Q96NW4 1050 aa13.09□□□□□ -0.31
PCDHA4-202ENST00000512229 RAB6CQ9H0N0 254 aa13.09□□□□□ -0.31
PCDHA4-202ENST00000512229 GON4LQ3T8J9 2241 aa13.09□□□□□ -0.31
PCDHA4-202ENST00000512229 PSMG1O95456 288 aa13.09□□□□□ -0.31
PCDHA4-202ENST00000512229 ZNF682O95780 498 aa13.09□□□□□ -0.31
PCDHA4-202ENST00000512229 SOD2P04179 222 aa13.09□□□□□ -0.31
PCDHA4-202ENST00000512229 ATP6V1B1P15313 513 aa13.09□□□□□ -0.31
PCDHA4-202ENST00000512229 PIK3R1P27986 724 aa13.09□□□□□ -0.31
PCDHA4-202ENST00000512229 ATP6V1E1P36543 226 aa13.09□□□□□ -0.31
PCDHA4-202ENST00000512229 MRPS22P82650 360 aaKnown RBP13.09□□□□□ -0.31
PCDHA4-202ENST00000512229 HPCAP84074 193 aa13.09□□□□□ -0.31
PCDHA4-202ENST00000512229 ABRQ12979 859 aa13.09□□□□□ -0.31
PCDHA4-202ENST00000512229 TP53BP2Q13625 1128 aa13.09□□□□□ -0.31
PCDHA4-202ENST00000512229 PAGE2BQ5JRK9 111 aa13.09□□□□□ -0.31
PCDHA4-202ENST00000512229 ZDHHC20Q5W0Z9 365 aa13.09□□□□□ -0.31
PCDHA4-202ENST00000512229 LRRC74BQ6ZQY2 392 aa13.09□□□□□ -0.31
PCDHA4-202ENST00000512229 OR6Y1Q8NGX8 325 aa13.09□□□□□ -0.31
PCDHA4-202ENST00000512229 SH3RF2Q8TEC5 729 aa13.09□□□□□ -0.31
PCDHA4-202ENST00000512229 HEXDCQ8WVB3 486 aa13.09□□□□□ -0.31
PCDHA4-202ENST00000512229 PYDC1Q8WXC3 89 aa13.09□□□□□ -0.31
PCDHA4-202ENST00000512229 RCN3Q96D15 328 aa13.09□□□□□ -0.31
PCDHA4-202ENST00000512229 CNBD2Q96M20 576 aa13.09□□□□□ -0.31
PCDHA4-202ENST00000512229 CCT7Q99832 543 aa13.09□□□□□ -0.31
PCDHA4-202ENST00000512229 ABCG8Q9H221 673 aa13.09□□□□□ -0.31
PCDHA4-202ENST00000512229 GABRDO14764 452 aa13.08□□□□□ -0.32
PCDHA4-202ENST00000512229 ZCCHC18P0CG32 403 aa13.08□□□□□ -0.32
PCDHA4-202ENST00000512229 PRKCHP24723 683 aa13.08□□□□□ -0.32
PCDHA4-202ENST00000512229 CHI3L1P36222 383 aaPredicted RBP13.08□□□□□ -0.32
PCDHA4-202ENST00000512229 PSME3P61289 254 aa13.08□□□□□ -0.32
PCDHA4-202ENST00000512229 KLF10Q13118 480 aa13.08□□□□□ -0.32
PCDHA4-202ENST00000512229 ZNF460Q14592 562 aa13.08□□□□□ -0.32
PCDHA4-202ENST00000512229 ZBTB6Q15916 424 aa13.08□□□□□ -0.32
PCDHA4-202ENST00000512229 LACTB2Q53H82 288 aaPredicted RBP13.08□□□□□ -0.32
PCDHA4-202ENST00000512229 TTC33Q6PID6 262 aaPredicted RBP13.08□□□□□ -0.32
PCDHA4-202ENST00000512229 CAND1Q86VP6 1230 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms