RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 AADACL2Q6P093 401 aa16.47■□□□□ 0.23
DDX41-213ENST00000512027 KIAA1328Q86T90 577 aa16.47■□□□□ 0.23
DDX41-213ENST00000512027 TRIM74Q86UV6 250 aa16.47■□□□□ 0.23
DDX41-213ENST00000512027 TMPRSS12Q86WS5 348 aa16.47■□□□□ 0.23
DDX41-213ENST00000512027 SFTPA2Q8IWL1 248 aa16.47■□□□□ 0.23
DDX41-213ENST00000512027 FAM181AQ8N9Y4 354 aa16.47■□□□□ 0.23
DDX41-213ENST00000512027 KDF1Q8NAX2 398 aaPredicted RBP16.47■□□□□ 0.23
DDX41-213ENST00000512027 OR56A4Q8NGH8 313 aa16.47■□□□□ 0.23
DDX41-213ENST00000512027 IFI44Q8TCB0 444 aa16.47■□□□□ 0.23
DDX41-213ENST00000512027 AGAP2Q99490 1192 aa16.47■□□□□ 0.23
DDX41-213ENST00000512027 ABCG8Q9H221 673 aa16.47■□□□□ 0.23
DDX41-213ENST00000512027 C10orf88Q9H8K7 445 aa16.47■□□□□ 0.23
DDX41-213ENST00000512027 CYP4F12Q9HCS2 524 aa16.47■□□□□ 0.23
DDX41-213ENST00000512027 UBP1Q9NZI7 540 aa16.47■□□□□ 0.23
DDX41-213ENST00000512027 SCN8AQ9UQD0 1980 aa16.47■□□□□ 0.23
DDX41-213ENST00000512027 GRID2IPA4D2P6 1211 aa16.46■□□□□ 0.23
DDX41-213ENST00000512027 TRABD2BA6NFA1 517 aa16.46■□□□□ 0.23
DDX41-213ENST00000512027 TAF4O00268 1085 aa16.46■□□□□ 0.23
DDX41-213ENST00000512027 PJA2O43164 708 aa16.46■□□□□ 0.23
DDX41-213ENST00000512027 MT-CYBP00156 380 aaPredicted RBP16.46■□□□□ 0.23
DDX41-213ENST00000512027 SOD1P00441 154 aa16.46■□□□□ 0.23
DDX41-213ENST00000512027 TNFP01375 233 aa16.46■□□□□ 0.23
DDX41-213ENST00000512027 PIRTP0C851 137 aa16.46■□□□□ 0.23
DDX41-213ENST00000512027 TGM2P21980 687 aa16.46■□□□□ 0.23
DDX41-213ENST00000512027 CA4P22748 312 aa16.46■□□□□ 0.23
DDX41-213ENST00000512027 NFKBIAP25963 317 aa16.46■□□□□ 0.23
DDX41-213ENST00000512027 CTNNA1P35221 906 aaKnown RBP16.46■□□□□ 0.23
DDX41-213ENST00000512027 POLD2P49005 469 aa16.46■□□□□ 0.23
DDX41-213ENST00000512027 BLKP51451 505 aa16.46■□□□□ 0.23
DDX41-213ENST00000512027 STC1P52823 247 aa16.46■□□□□ 0.23
DDX41-213ENST00000512027 ILKQ13418 452 aa16.46■□□□□ 0.23
DDX41-213ENST00000512027 PERM1Q5SV97 790 aa16.46■□□□□ 0.23
DDX41-213ENST00000512027 C6orf132Q5T0Z8 1188 aa16.46■□□□□ 0.23
DDX41-213ENST00000512027 DOK6Q6PKX4 331 aa16.46■□□□□ 0.23
DDX41-213ENST00000512027 EFL1Q7Z2Z2 1120 aaKnown RBP16.46■□□□□ 0.23
DDX41-213ENST00000512027 RCOR2Q8IZ40 523 aa16.46■□□□□ 0.23
DDX41-213ENST00000512027 NDUFAF2Q8N183 169 aa16.46■□□□□ 0.23
DDX41-213ENST00000512027 KYQ8NBH2 561 aa16.46■□□□□ 0.23
DDX41-213ENST00000512027 EXD1Q8NHP7 514 aa16.46■□□□□ 0.23
DDX41-213ENST00000512027 CCL4L1Q8NHW4 92 aa16.46■□□□□ 0.23
DDX41-213ENST00000512027 IMP4Q96G21 291 aaKnown RBP16.46■□□□□ 0.23
DDX41-213ENST00000512027 RBM41Q96IZ5 413 aaKnown RBP16.46■□□□□ 0.23
DDX41-213ENST00000512027 TBATAQ96M53 351 aa16.46■□□□□ 0.23
DDX41-213ENST00000512027 TRIB3Q96RU7 358 aa16.46■□□□□ 0.23
DDX41-213ENST00000512027 FAM118BQ9BPY3 351 aa16.46■□□□□ 0.23
DDX41-213ENST00000512027 BOCQ9BWV1 1114 aa16.46■□□□□ 0.23
DDX41-213ENST00000512027 TMEM168Q9H0V1 697 aa16.46■□□□□ 0.23
DDX41-213ENST00000512027 GLOD4Q9HC38 313 aa16.46■□□□□ 0.23
DDX41-213ENST00000512027 HAUS2Q9NVX0 235 aa16.46■□□□□ 0.23
DDX41-213ENST00000512027 GULP1Q9UBP9 304 aa16.46■□□□□ 0.23
DDX41-213ENST00000512027 DOLKQ9UPQ8 538 aa16.46■□□□□ 0.23
DDX41-213ENST00000512027 PKD1L2Q7Z442 2459 aa16.46■□□□□ 0.23
DDX41-213ENST00000512027 LAMA5O15230 3695 aa16.46■□□□□ 0.23
DDX41-213ENST00000512027 ITPR1Q14643 2758 aa16.45■□□□□ 0.22
DDX41-213ENST00000512027 C1orf232A0A0U1RR37 186 aa16.45■□□□□ 0.22
DDX41-213ENST00000512027 PRSS38A1L453 326 aa16.45■□□□□ 0.22
DDX41-213ENST00000512027 MACROD2A1Z1Q3 448 aa16.45■□□□□ 0.22
DDX41-213ENST00000512027 BTNL10A8MVZ5 291 aa16.45■□□□□ 0.22
DDX41-213ENST00000512027 TPP1O14773 563 aa16.45■□□□□ 0.22
DDX41-213ENST00000512027 OPA1O60313 960 aa16.45■□□□□ 0.22
DDX41-213ENST00000512027 SLC4A1P02730 911 aa16.45■□□□□ 0.22
DDX41-213ENST00000512027 FUCA1P04066 466 aa16.45■□□□□ 0.22
DDX41-213ENST00000512027 MYCLP1P12525 358 aaPredicted RBP16.45■□□□□ 0.22
DDX41-213ENST00000512027 CD68P34810 354 aaPredicted RBP16.45■□□□□ 0.22
DDX41-213ENST00000512027 NR2C2P49116 596 aa16.45■□□□□ 0.22
DDX41-213ENST00000512027 CDK3Q00526 305 aa16.45■□□□□ 0.22
DDX41-213ENST00000512027 WASHC5Q12768 1159 aa16.45■□□□□ 0.22
DDX41-213ENST00000512027 ELOCQ15369 112 aa16.45■□□□□ 0.22
DDX41-213ENST00000512027 TEX44Q53QW1 395 aa16.45■□□□□ 0.22
DDX41-213ENST00000512027 NT5DC3Q86UY8 548 aa16.45■□□□□ 0.22
DDX41-213ENST00000512027 FSTL5Q8N475 847 aaPredicted RBP16.45■□□□□ 0.22
DDX41-213ENST00000512027 LRRC57Q8N9N7 239 aa16.45■□□□□ 0.22
DDX41-213ENST00000512027 ATL2Q8NHH9 583 aa16.45■□□□□ 0.22
DDX41-213ENST00000512027 TFB1MQ8WVM0 346 aaKnown RBP16.45■□□□□ 0.22
DDX41-213ENST00000512027 ALG3Q92685 438 aa16.45■□□□□ 0.22
DDX41-213ENST00000512027 P3H4Q92791 437 aa16.45■□□□□ 0.22
DDX41-213ENST00000512027 AP2M1Q96CW1 435 aa16.45■□□□□ 0.22
DDX41-213ENST00000512027 TEX101Q9BY14 249 aa16.45■□□□□ 0.22
DDX41-213ENST00000512027 SLC25A51Q9H1U9 297 aa16.45■□□□□ 0.22
DDX41-213ENST00000512027 PHPT1Q9NRX4 125 aaPredicted RBP16.45■□□□□ 0.22
DDX41-213ENST00000512027 IMPACTQ9P2X3 320 aa16.45■□□□□ 0.22
DDX41-213ENST00000512027 PACSIN2Q9UNF0 486 aaPredicted RBP16.45■□□□□ 0.22
DDX41-213ENST00000512027 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.45■□□□□ 0.22
DDX41-213ENST00000512027 DGKBQ9Y6T7 804 aa16.45■□□□□ 0.22
DDX41-213ENST00000512027 CELSR3Q9NYQ7 3312 aa16.45■□□□□ 0.22
DDX41-213ENST00000512027 APC2O95996 2303 aa16.45■□□□□ 0.22
DDX41-213ENST00000512027 ARHGEF17Q96PE2 2063 aaPredicted RBP16.44■□□□□ 0.22
DDX41-213ENST00000512027 KNTC1P50748 2209 aa16.44■□□□□ 0.22
DDX41-213ENST00000512027 TMEM8BA6NDV4 472 aa16.44■□□□□ 0.22
DDX41-213ENST00000512027 ANKRD66B4E2M5 251 aa16.44■□□□□ 0.22
DDX41-213ENST00000512027 INPP4BO15327 924 aa16.44■□□□□ 0.22
DDX41-213ENST00000512027 PMPCBO75439 489 aa16.44■□□□□ 0.22
DDX41-213ENST00000512027 CEACAM5P06731 702 aa16.44■□□□□ 0.22
DDX41-213ENST00000512027 HOXC4P09017 264 aaPredicted RBP16.44■□□□□ 0.22
DDX41-213ENST00000512027 ZNF30P17039 623 aa16.44■□□□□ 0.22
DDX41-213ENST00000512027 NFKB1P19838 968 aa16.44■□□□□ 0.22
DDX41-213ENST00000512027 KELP23276 732 aa16.44■□□□□ 0.22
DDX41-213ENST00000512027 GPR1P46091 355 aa16.44■□□□□ 0.22
DDX41-213ENST00000512027 DUSP3P51452 185 aaPredicted RBP16.44■□□□□ 0.22
DDX41-213ENST00000512027 CYP4F3Q08477 520 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms