RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 APOBEC3BQ9UH17 382 aaKnown RBP16.12■□□□□ 0.17
PDLIM5-216ENST00000511767 MAP1BP46821 2468 aaKnown RBP16.12■□□□□ 0.17
PDLIM5-216ENST00000511767 MACROD2A1Z1Q3 448 aa16.11■□□□□ 0.17
PDLIM5-216ENST00000511767 HACD1B0YJ81 288 aa16.11■□□□□ 0.17
PDLIM5-216ENST00000511767 C1QTNF9BB2RNN3 333 aa16.11■□□□□ 0.17
PDLIM5-216ENST00000511767 APOC4-APOC2K7ER74 178 aa16.11■□□□□ 0.17
PDLIM5-216ENST00000511767 CACNB4O00305 520 aaPredicted RBP16.11■□□□□ 0.17
PDLIM5-216ENST00000511767 PDE2AO00408 941 aaPredicted RBP16.11■□□□□ 0.17
PDLIM5-216ENST00000511767 MTSS1O43312 755 aa16.11■□□□□ 0.17
PDLIM5-216ENST00000511767 RFPL3O75679 317 aa16.11■□□□□ 0.17
PDLIM5-216ENST00000511767 RASGRP1O95267 797 aa16.11■□□□□ 0.17
PDLIM5-216ENST00000511767 MT-CYBP00156 380 aaPredicted RBP16.11■□□□□ 0.17
PDLIM5-216ENST00000511767 APOC2P02655 101 aa16.11■□□□□ 0.17
PDLIM5-216ENST00000511767 PROS1P07225 676 aa16.11■□□□□ 0.17
PDLIM5-216ENST00000511767 C1QTNF9P0C862 333 aa16.11■□□□□ 0.17
PDLIM5-216ENST00000511767 ALPPL2P10696 532 aa16.11■□□□□ 0.17
PDLIM5-216ENST00000511767 E2F1Q01094 437 aa16.11■□□□□ 0.17
PDLIM5-216ENST00000511767 CDK18Q07002 472 aa16.11■□□□□ 0.17
PDLIM5-216ENST00000511767 SLC14A2Q15849 920 aa16.11■□□□□ 0.17
PDLIM5-216ENST00000511767 DEFB133Q30KQ1 61 aa16.11■□□□□ 0.17
PDLIM5-216ENST00000511767 HS1BP3Q53T59 392 aa16.11■□□□□ 0.17
PDLIM5-216ENST00000511767 LVRNQ6Q4G3 990 aa16.11■□□□□ 0.17
PDLIM5-216ENST00000511767 PID1Q7Z2X4 250 aa16.11■□□□□ 0.17
PDLIM5-216ENST00000511767 PEX26Q7Z412 305 aa16.11■□□□□ 0.17
PDLIM5-216ENST00000511767 KDELC2Q7Z4H8 507 aa16.11■□□□□ 0.17
PDLIM5-216ENST00000511767 TMPRSS12Q86WS5 348 aa16.11■□□□□ 0.17
PDLIM5-216ENST00000511767 NRSN1Q8IZ57 195 aa16.11■□□□□ 0.17
PDLIM5-216ENST00000511767 TXLNBQ8N3L3 684 aa16.11■□□□□ 0.17
PDLIM5-216ENST00000511767 SDR16C5Q8N3Y7 309 aa16.11■□□□□ 0.17
PDLIM5-216ENST00000511767 LPCAT1Q8NF37 534 aa16.11■□□□□ 0.17
PDLIM5-216ENST00000511767 OR56A4Q8NGH8 313 aa16.11■□□□□ 0.17
PDLIM5-216ENST00000511767 ATL2Q8NHH9 583 aa16.11■□□□□ 0.17
PDLIM5-216ENST00000511767 HTR3CQ8WXA8 447 aa16.11■□□□□ 0.17
PDLIM5-216ENST00000511767 SCAMP4Q969E2 229 aa16.11■□□□□ 0.17
PDLIM5-216ENST00000511767 HAUS1Q96CS2 278 aa16.11■□□□□ 0.17
PDLIM5-216ENST00000511767 EID2BQ96D98 161 aa16.11■□□□□ 0.17
PDLIM5-216ENST00000511767 LRRC61Q9BV99 259 aa16.11■□□□□ 0.17
PDLIM5-216ENST00000511767 BOCQ9BWV1 1114 aa16.11■□□□□ 0.17
PDLIM5-216ENST00000511767 ADGRE3Q9BY15 652 aa16.11■□□□□ 0.17
PDLIM5-216ENST00000511767 C10orf88Q9H8K7 445 aa16.11■□□□□ 0.17
PDLIM5-216ENST00000511767 MRPL40Q9NQ50 206 aaKnown RBP16.11■□□□□ 0.17
PDLIM5-216ENST00000511767 PTPRBP23467 1997 aa16.1■□□□□ 0.17
PDLIM5-216ENST00000511767 LOC285095A0A1B0GVY8 99 aa16.1■□□□□ 0.17
PDLIM5-216ENST00000511767 CAPN8A6NHC0 703 aa16.1■□□□□ 0.17
PDLIM5-216ENST00000511767 GOLGA6L6A8MZA4 724 aa16.1■□□□□ 0.17
PDLIM5-216ENST00000511767 DDX3YO15523 660 aaKnown RBP16.1■□□□□ 0.17
PDLIM5-216ENST00000511767 CEACAM5P06731 702 aa16.1■□□□□ 0.17
PDLIM5-216ENST00000511767 CELA2BP08218 269 aaPredicted RBP16.1■□□□□ 0.17
PDLIM5-216ENST00000511767 CTSEP14091 401 aa16.1■□□□□ 0.17
PDLIM5-216ENST00000511767 KELP23276 732 aa16.1■□□□□ 0.17
PDLIM5-216ENST00000511767 DAB2P98082 770 aa16.1■□□□□ 0.17
PDLIM5-216ENST00000511767 CAMK2BQ13554 666 aa16.1■□□□□ 0.17
PDLIM5-216ENST00000511767 ZCCHC8Q6NZY4 707 aaKnown RBP16.1■□□□□ 0.17
PDLIM5-216ENST00000511767 SYCE1Q8N0S2 351 aa16.1■□□□□ 0.17
PDLIM5-216ENST00000511767 ZNF567Q8N184 647 aa16.1■□□□□ 0.17
PDLIM5-216ENST00000511767 GALNT15Q8N3T1 639 aa16.1■□□□□ 0.17
PDLIM5-216ENST00000511767 FSTL5Q8N475 847 aaPredicted RBP16.1■□□□□ 0.17
PDLIM5-216ENST00000511767 KDF1Q8NAX2 398 aaPredicted RBP16.1■□□□□ 0.17
PDLIM5-216ENST00000511767 ACTL9Q8TC94 416 aa16.1■□□□□ 0.17
PDLIM5-216ENST00000511767 AP2M1Q96CW1 435 aa16.1■□□□□ 0.17
PDLIM5-216ENST00000511767 FCRL5Q96RD9 977 aa16.1■□□□□ 0.17
PDLIM5-216ENST00000511767 WDR24Q96S15 920 aa16.1■□□□□ 0.17
PDLIM5-216ENST00000511767 AGAP2Q99490 1192 aa16.1■□□□□ 0.17
PDLIM5-216ENST00000511767 VAT1Q99536 393 aa16.1■□□□□ 0.17
PDLIM5-216ENST00000511767 WDR26Q9H7D7 661 aa16.1■□□□□ 0.17
PDLIM5-216ENST00000511767 USP29Q9HBJ7 922 aa16.1■□□□□ 0.17
PDLIM5-216ENST00000511767 MAGEE1Q9HCI5 957 aa16.1■□□□□ 0.17
PDLIM5-216ENST00000511767 FGF22Q9HCT0 170 aa16.1■□□□□ 0.17
PDLIM5-216ENST00000511767 PHPT1Q9NRX4 125 aaPredicted RBP16.1■□□□□ 0.17
PDLIM5-216ENST00000511767 KLQ9UEF7 1012 aa16.1■□□□□ 0.17
PDLIM5-216ENST00000511767 CD84Q9UIB8 345 aa16.1■□□□□ 0.17
PDLIM5-216ENST00000511767 FRYQ5TBA9 3013 aa16.09■□□□□ 0.17
PDLIM5-216ENST00000511767 RGSL1A5PLK6 1076 aa16.09■□□□□ 0.17
PDLIM5-216ENST00000511767 FAM149AA5PLN7 773 aa16.09■□□□□ 0.17
PDLIM5-216ENST00000511767 SOD1P00441 154 aa16.09■□□□□ 0.17
PDLIM5-216ENST00000511767 EPOP01588 193 aa16.09■□□□□ 0.17
PDLIM5-216ENST00000511767 ANXA6P08133 673 aa16.09■□□□□ 0.17
PDLIM5-216ENST00000511767 RBL1P28749 1068 aa16.09■□□□□ 0.17
PDLIM5-216ENST00000511767 CETN2P41208 172 aa16.09■□□□□ 0.17
PDLIM5-216ENST00000511767 SPINT3P49223 89 aa16.09■□□□□ 0.17
PDLIM5-216ENST00000511767 DUSP3P51452 185 aaPredicted RBP16.09■□□□□ 0.17
PDLIM5-216ENST00000511767 CDK3Q00526 305 aa16.09■□□□□ 0.17
PDLIM5-216ENST00000511767 OTUD4Q01804 1114 aaKnown RBP16.09■□□□□ 0.17
PDLIM5-216ENST00000511767 NOMO1Q15155 1222 aa16.09■□□□□ 0.17
PDLIM5-216ENST00000511767 ELOCQ15369 112 aa16.09■□□□□ 0.17
PDLIM5-216ENST00000511767 OGFOD3Q6PK18 319 aa16.09■□□□□ 0.17
PDLIM5-216ENST00000511767 KDELC1Q6UW63 502 aa16.09■□□□□ 0.17
PDLIM5-216ENST00000511767 UNQ6494/PRO21346Q6UXR6 183 aa16.09■□□□□ 0.17
PDLIM5-216ENST00000511767 ADAMTSL4Q6UY14 1074 aa16.09■□□□□ 0.17
PDLIM5-216ENST00000511767 ZNF765Q7L2R6 523 aa16.09■□□□□ 0.17
PDLIM5-216ENST00000511767 TMC3Q7Z5M5 1100 aa16.09■□□□□ 0.17
PDLIM5-216ENST00000511767 HEATR4Q86WZ0 1026 aa16.09■□□□□ 0.17
PDLIM5-216ENST00000511767 LRRC8AQ8IWT6 810 aa16.09■□□□□ 0.17
PDLIM5-216ENST00000511767 CACTIN-AS1Q8N1I8 211 aa16.09■□□□□ 0.17
PDLIM5-216ENST00000511767 HES6Q96HZ4 224 aa16.09■□□□□ 0.17
PDLIM5-216ENST00000511767 QKIQ96PU8 341 aaKnown RBP eCLIP16.09■□□□□ 0.174e-24■■■■■ 117.3
PDLIM5-216ENST00000511767 RIOK2Q9BVS4 552 aaKnown RBP16.09■□□□□ 0.17
PDLIM5-216ENST00000511767 FRMD8Q9BZ67 464 aaPredicted RBP16.09■□□□□ 0.17
PDLIM5-216ENST00000511767 UBP1Q9NZI7 540 aa16.09■□□□□ 0.17
PDLIM5-216ENST00000511767 TRHDEQ9UKU6 1024 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms