RNA–Protein interactions for RNA: ENST00000509468.1

KDM3B-206, Transcript of lysine demethylase 3B, humanhuman

TSL 5

Gene KDM3B, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-206ENST00000509468 CDK3Q00526 305 aa12.62□□□□□ -0.39
KDM3B-206ENST00000509468 ILF3Q12906 894 aaKnown RBP eCLIP12.62□□□□□ -0.39
KDM3B-206ENST00000509468 TRAF2Q12933 501 aa12.62□□□□□ -0.39
KDM3B-206ENST00000509468 HLTFQ14527 1009 aaKnown RBP eCLIP12.62□□□□□ -0.39
KDM3B-206ENST00000509468 PAFAH1B3Q15102 231 aaKnown RBP12.62□□□□□ -0.39
KDM3B-206ENST00000509468 IFI16Q16666 785 aaKnown RBP12.62□□□□□ -0.39
KDM3B-206ENST00000509468 TAF1BQ53T94 588 aaPredicted RBP12.62□□□□□ -0.39
KDM3B-206ENST00000509468 ANKRD20A8PQ5CZ79 823 aa12.62□□□□□ -0.39
KDM3B-206ENST00000509468 KCTD16Q68DU8 428 aa12.62□□□□□ -0.39
KDM3B-206ENST00000509468 Q6ZVL8 140 aa12.62□□□□□ -0.39
KDM3B-206ENST00000509468 HSD11B1LQ7Z5J1 315 aa12.62□□□□□ -0.39
KDM3B-206ENST00000509468 RAVER1Q8IY67 606 aaKnown RBP12.62□□□□□ -0.39
KDM3B-206ENST00000509468 PIH1D2Q8WWB5 315 aa12.62□□□□□ -0.39
KDM3B-206ENST00000509468 FATE1Q969F0 183 aa12.62□□□□□ -0.39
KDM3B-206ENST00000509468 TSGA13Q96PP4 275 aa12.62□□□□□ -0.39
KDM3B-206ENST00000509468 MCCC1Q96RQ3 725 aaPredicted RBP12.62□□□□□ -0.39
KDM3B-206ENST00000509468 SEMA3CQ99985 751 aa12.62□□□□□ -0.39
KDM3B-206ENST00000509468 FOXP3Q9BZS1 431 aa12.62□□□□□ -0.39
KDM3B-206ENST00000509468 CARS2Q9HA77 564 aaKnown RBP12.62□□□□□ -0.39
KDM3B-206ENST00000509468 UVRAGQ9P2Y5 699 aa12.62□□□□□ -0.39
KDM3B-206ENST00000509468 RNF215Q9Y6U7 377 aa12.62□□□□□ -0.39
KDM3B-206ENST00000509468 GOLGA6CA6NDK9 693 aa12.61□□□□□ -0.39
KDM3B-206ENST00000509468 GOLGA6BA6NDN3 693 aa12.61□□□□□ -0.39
KDM3B-206ENST00000509468 NPIPB15A6NHN6 443 aaPredicted RBP12.61□□□□□ -0.39
KDM3B-206ENST00000509468 RHPN2P1A8MT19 583 aa12.61□□□□□ -0.39
KDM3B-206ENST00000509468 B4DGG1 531 aa12.61□□□□□ -0.39
KDM3B-206ENST00000509468 CASC3O15234 703 aaKnown RBP12.61□□□□□ -0.39
KDM3B-206ENST00000509468 NVLO15381 856 aaKnown RBP12.61□□□□□ -0.39
KDM3B-206ENST00000509468 FGF1P05230 155 aa12.61□□□□□ -0.39
KDM3B-206ENST00000509468 KRT7P08729 469 aa12.61□□□□□ -0.39
KDM3B-206ENST00000509468 H2AFZP0C0S5 128 aa12.61□□□□□ -0.39
KDM3B-206ENST00000509468 GOLGA6DP0CG33 693 aa12.61□□□□□ -0.39
KDM3B-206ENST00000509468 ZNF30P17039 623 aa12.61□□□□□ -0.39
KDM3B-206ENST00000509468 CA4P22748 312 aa12.61□□□□□ -0.39
KDM3B-206ENST00000509468 SLC5A2P31639 672 aa12.61□□□□□ -0.39
KDM3B-206ENST00000509468 GARSP41250 739 aaKnown RBP12.61□□□□□ -0.39
KDM3B-206ENST00000509468 GPR1P46091 355 aa12.61□□□□□ -0.39
KDM3B-206ENST00000509468 GNPDA1P46926 289 aa12.61□□□□□ -0.39
KDM3B-206ENST00000509468 EPHB1P54762 984 aa12.61□□□□□ -0.39
KDM3B-206ENST00000509468 ZFP36L1Q07352 338 aaKnown RBP12.61□□□□□ -0.39
KDM3B-206ENST00000509468 GALNT2Q10471 571 aa12.61□□□□□ -0.39
KDM3B-206ENST00000509468 MMRN1Q13201 1228 aa12.61□□□□□ -0.39
KDM3B-206ENST00000509468 BIRC2Q13490 618 aa12.61□□□□□ -0.39
KDM3B-206ENST00000509468 DPYSL3Q14195 570 aa12.61□□□□□ -0.39
KDM3B-206ENST00000509468 CLPPQ16740 277 aaPredicted RBP12.61□□□□□ -0.39
KDM3B-206ENST00000509468 RAET1GQ6H3X3 334 aa12.61□□□□□ -0.39
KDM3B-206ENST00000509468 CCDC81Q6ZN84 652 aa12.61□□□□□ -0.39
KDM3B-206ENST00000509468 H2AFVQ71UI9 128 aa12.61□□□□□ -0.39
KDM3B-206ENST00000509468 SPRED1Q7Z699 444 aa12.61□□□□□ -0.39
KDM3B-206ENST00000509468 TECPR1Q7Z6L1 1165 aa12.61□□□□□ -0.39
KDM3B-206ENST00000509468 B3GNT8Q7Z7M8 397 aa12.61□□□□□ -0.39
KDM3B-206ENST00000509468 PIM3Q86V86 326 aa12.61□□□□□ -0.39
KDM3B-206ENST00000509468 NRSN1Q8IZ57 195 aa12.61□□□□□ -0.39
KDM3B-206ENST00000509468 CCL4L1Q8NHW4 92 aa12.61□□□□□ -0.39
KDM3B-206ENST00000509468 ZNF564Q8TBZ8 553 aaPredicted RBP12.61□□□□□ -0.39
KDM3B-206ENST00000509468 MAML1Q92585 1016 aa12.61□□□□□ -0.39
KDM3B-206ENST00000509468 AP2M1Q96CW1 435 aa12.61□□□□□ -0.39
KDM3B-206ENST00000509468 CMKLR1Q99788 373 aa12.61□□□□□ -0.39
KDM3B-206ENST00000509468 FRMD8Q9BZ67 464 aaPredicted RBP12.61□□□□□ -0.39
KDM3B-206ENST00000509468 SPATS2LQ9NUQ6 558 aaKnown RBP12.61□□□□□ -0.39
KDM3B-206ENST00000509468 RBM22Q9NW64 420 aaKnown RBP eCLIP12.61□□□□□ -0.39
KDM3B-206ENST00000509468 GOLGA6AQ9NYA3 693 aa12.61□□□□□ -0.39
KDM3B-206ENST00000509468 AKAP7Q9P0M2 348 aaPredicted RBP12.61□□□□□ -0.39
KDM3B-206ENST00000509468 IFNKQ9P0W0 207 aa12.61□□□□□ -0.39
KDM3B-206ENST00000509468 CTTNBP2NLQ9P2B4 639 aa12.61□□□□□ -0.39
KDM3B-206ENST00000509468 DNPEPQ9ULA0 475 aa12.61□□□□□ -0.39
KDM3B-206ENST00000509468 SLC17A4Q9Y2C5 497 aa12.61□□□□□ -0.39
KDM3B-206ENST00000509468 ARHGEF17Q96PE2 2063 aaPredicted RBP12.61□□□□□ -0.39
KDM3B-206ENST00000509468 PTPRQQ9UMZ3 2332 aa12.6□□□□□ -0.39
KDM3B-206ENST00000509468 A0A0J9YYE9 177 aa12.6□□□□□ -0.39
KDM3B-206ENST00000509468 K7ENP7 123 aa12.6□□□□□ -0.39
KDM3B-206ENST00000509468 FZD6O60353 706 aa12.6□□□□□ -0.39
KDM3B-206ENST00000509468 PROSCO94903 275 aa12.6□□□□□ -0.39
KDM3B-206ENST00000509468 CPNE6O95741 557 aa12.6□□□□□ -0.39
KDM3B-206ENST00000509468 TRBC1P01850 177 aa12.6□□□□□ -0.39
KDM3B-206ENST00000509468 FUCA1P04066 466 aa12.6□□□□□ -0.39
KDM3B-206ENST00000509468 IVLP07476 585 aa12.6□□□□□ -0.39
KDM3B-206ENST00000509468 PDHA1P08559 390 aa12.6□□□□□ -0.39
KDM3B-206ENST00000509468 CD48P09326 243 aa12.6□□□□□ -0.39
KDM3B-206ENST00000509468 CTPS1P17812 591 aa12.6□□□□□ -0.39
KDM3B-206ENST00000509468 MX2P20592 715 aa12.6□□□□□ -0.39
KDM3B-206ENST00000509468 PTMSP20962 102 aa12.6□□□□□ -0.39
KDM3B-206ENST00000509468 LHCGRP22888 699 aa12.6□□□□□ -0.39
KDM3B-206ENST00000509468 HNRNPH3P31942 346 aaKnown RBP12.6□□□□□ -0.39
KDM3B-206ENST00000509468 CASP14P31944 242 aa12.6□□□□□ -0.39
KDM3B-206ENST00000509468 GPR3P46089 330 aa12.6□□□□□ -0.39
KDM3B-206ENST00000509468 ARSEP51690 589 aa12.6□□□□□ -0.39
KDM3B-206ENST00000509468 RPL26P61254 145 aaKnown RBP12.6□□□□□ -0.39
KDM3B-206ENST00000509468 B4GALNT1Q00973 533 aa12.6□□□□□ -0.39
KDM3B-206ENST00000509468 PTSQ03393 145 aa12.6□□□□□ -0.39
KDM3B-206ENST00000509468 CFHR1Q03591 330 aa12.6□□□□□ -0.39
KDM3B-206ENST00000509468 ATP13A4Q4VNC1 1196 aa12.6□□□□□ -0.39
KDM3B-206ENST00000509468 TMEM164Q5U3C3 297 aa12.6□□□□□ -0.39
KDM3B-206ENST00000509468 ALG1LQ6GMV1 187 aa12.6□□□□□ -0.39
KDM3B-206ENST00000509468 INO80CQ6PI98 192 aaPredicted RBP12.6□□□□□ -0.39
KDM3B-206ENST00000509468 ZNF765Q7L2R6 523 aa12.6□□□□□ -0.39
KDM3B-206ENST00000509468 TSPAN33Q86UF1 283 aa12.6□□□□□ -0.39
KDM3B-206ENST00000509468 C17orf82Q86X59 251 aaPredicted RBP12.6□□□□□ -0.39
KDM3B-206ENST00000509468 NRROSQ86YC3 692 aa12.6□□□□□ -0.39
KDM3B-206ENST00000509468 JAMLQ86YT9 394 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms