RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 NUS1Q96E22 293 aa16.12■□□□□ 0.17
PDLIM5-212ENST00000509333 APOBEC3BQ9UH17 382 aaKnown RBP16.12■□□□□ 0.17
PDLIM5-212ENST00000509333 MAP1BP46821 2468 aaKnown RBP16.12■□□□□ 0.17
PDLIM5-212ENST00000509333 MACROD2A1Z1Q3 448 aa16.11■□□□□ 0.17
PDLIM5-212ENST00000509333 HACD1B0YJ81 288 aa16.11■□□□□ 0.17
PDLIM5-212ENST00000509333 C1QTNF9BB2RNN3 333 aa16.11■□□□□ 0.17
PDLIM5-212ENST00000509333 APOC4-APOC2K7ER74 178 aa16.11■□□□□ 0.17
PDLIM5-212ENST00000509333 CACNB4O00305 520 aaPredicted RBP16.11■□□□□ 0.17
PDLIM5-212ENST00000509333 PDE2AO00408 941 aaPredicted RBP16.11■□□□□ 0.17
PDLIM5-212ENST00000509333 MTSS1O43312 755 aa16.11■□□□□ 0.17
PDLIM5-212ENST00000509333 RFPL3O75679 317 aa16.11■□□□□ 0.17
PDLIM5-212ENST00000509333 RASGRP1O95267 797 aa16.11■□□□□ 0.17
PDLIM5-212ENST00000509333 MT-CYBP00156 380 aaPredicted RBP16.11■□□□□ 0.17
PDLIM5-212ENST00000509333 APOC2P02655 101 aa16.11■□□□□ 0.17
PDLIM5-212ENST00000509333 PROS1P07225 676 aa16.11■□□□□ 0.17
PDLIM5-212ENST00000509333 C1QTNF9P0C862 333 aa16.11■□□□□ 0.17
PDLIM5-212ENST00000509333 ALPPL2P10696 532 aa16.11■□□□□ 0.17
PDLIM5-212ENST00000509333 E2F1Q01094 437 aa16.11■□□□□ 0.17
PDLIM5-212ENST00000509333 CDK18Q07002 472 aa16.11■□□□□ 0.17
PDLIM5-212ENST00000509333 SLC14A2Q15849 920 aa16.11■□□□□ 0.17
PDLIM5-212ENST00000509333 DEFB133Q30KQ1 61 aa16.11■□□□□ 0.17
PDLIM5-212ENST00000509333 HS1BP3Q53T59 392 aa16.11■□□□□ 0.17
PDLIM5-212ENST00000509333 LVRNQ6Q4G3 990 aa16.11■□□□□ 0.17
PDLIM5-212ENST00000509333 PID1Q7Z2X4 250 aa16.11■□□□□ 0.17
PDLIM5-212ENST00000509333 PEX26Q7Z412 305 aa16.11■□□□□ 0.17
PDLIM5-212ENST00000509333 KDELC2Q7Z4H8 507 aa16.11■□□□□ 0.17
PDLIM5-212ENST00000509333 TMPRSS12Q86WS5 348 aa16.11■□□□□ 0.17
PDLIM5-212ENST00000509333 NRSN1Q8IZ57 195 aa16.11■□□□□ 0.17
PDLIM5-212ENST00000509333 TXLNBQ8N3L3 684 aa16.11■□□□□ 0.17
PDLIM5-212ENST00000509333 SDR16C5Q8N3Y7 309 aa16.11■□□□□ 0.17
PDLIM5-212ENST00000509333 LPCAT1Q8NF37 534 aa16.11■□□□□ 0.17
PDLIM5-212ENST00000509333 OR56A4Q8NGH8 313 aa16.11■□□□□ 0.17
PDLIM5-212ENST00000509333 ATL2Q8NHH9 583 aa16.11■□□□□ 0.17
PDLIM5-212ENST00000509333 HTR3CQ8WXA8 447 aa16.11■□□□□ 0.17
PDLIM5-212ENST00000509333 SCAMP4Q969E2 229 aa16.11■□□□□ 0.17
PDLIM5-212ENST00000509333 HAUS1Q96CS2 278 aa16.11■□□□□ 0.17
PDLIM5-212ENST00000509333 EID2BQ96D98 161 aa16.11■□□□□ 0.17
PDLIM5-212ENST00000509333 LRRC61Q9BV99 259 aa16.11■□□□□ 0.17
PDLIM5-212ENST00000509333 BOCQ9BWV1 1114 aa16.11■□□□□ 0.17
PDLIM5-212ENST00000509333 ADGRE3Q9BY15 652 aa16.11■□□□□ 0.17
PDLIM5-212ENST00000509333 C10orf88Q9H8K7 445 aa16.11■□□□□ 0.17
PDLIM5-212ENST00000509333 MRPL40Q9NQ50 206 aaKnown RBP16.11■□□□□ 0.17
PDLIM5-212ENST00000509333 PTPRBP23467 1997 aa16.1■□□□□ 0.17
PDLIM5-212ENST00000509333 LOC285095A0A1B0GVY8 99 aa16.1■□□□□ 0.17
PDLIM5-212ENST00000509333 CAPN8A6NHC0 703 aa16.1■□□□□ 0.17
PDLIM5-212ENST00000509333 GOLGA6L6A8MZA4 724 aa16.1■□□□□ 0.17
PDLIM5-212ENST00000509333 DDX3YO15523 660 aaKnown RBP16.1■□□□□ 0.17
PDLIM5-212ENST00000509333 CEACAM5P06731 702 aa16.1■□□□□ 0.17
PDLIM5-212ENST00000509333 CELA2BP08218 269 aaPredicted RBP16.1■□□□□ 0.17
PDLIM5-212ENST00000509333 CTSEP14091 401 aa16.1■□□□□ 0.17
PDLIM5-212ENST00000509333 KELP23276 732 aa16.1■□□□□ 0.17
PDLIM5-212ENST00000509333 DAB2P98082 770 aa16.1■□□□□ 0.17
PDLIM5-212ENST00000509333 CAMK2BQ13554 666 aa16.1■□□□□ 0.17
PDLIM5-212ENST00000509333 ZCCHC8Q6NZY4 707 aaKnown RBP16.1■□□□□ 0.17
PDLIM5-212ENST00000509333 SYCE1Q8N0S2 351 aa16.1■□□□□ 0.17
PDLIM5-212ENST00000509333 ZNF567Q8N184 647 aa16.1■□□□□ 0.17
PDLIM5-212ENST00000509333 GALNT15Q8N3T1 639 aa16.1■□□□□ 0.17
PDLIM5-212ENST00000509333 FSTL5Q8N475 847 aaPredicted RBP16.1■□□□□ 0.17
PDLIM5-212ENST00000509333 KDF1Q8NAX2 398 aaPredicted RBP16.1■□□□□ 0.17
PDLIM5-212ENST00000509333 ACTL9Q8TC94 416 aa16.1■□□□□ 0.17
PDLIM5-212ENST00000509333 AP2M1Q96CW1 435 aa16.1■□□□□ 0.17
PDLIM5-212ENST00000509333 FCRL5Q96RD9 977 aa16.1■□□□□ 0.17
PDLIM5-212ENST00000509333 WDR24Q96S15 920 aa16.1■□□□□ 0.17
PDLIM5-212ENST00000509333 AGAP2Q99490 1192 aa16.1■□□□□ 0.17
PDLIM5-212ENST00000509333 VAT1Q99536 393 aa16.1■□□□□ 0.17
PDLIM5-212ENST00000509333 WDR26Q9H7D7 661 aa16.1■□□□□ 0.17
PDLIM5-212ENST00000509333 USP29Q9HBJ7 922 aa16.1■□□□□ 0.17
PDLIM5-212ENST00000509333 MAGEE1Q9HCI5 957 aa16.1■□□□□ 0.17
PDLIM5-212ENST00000509333 FGF22Q9HCT0 170 aa16.1■□□□□ 0.17
PDLIM5-212ENST00000509333 PHPT1Q9NRX4 125 aaPredicted RBP16.1■□□□□ 0.17
PDLIM5-212ENST00000509333 KLQ9UEF7 1012 aa16.1■□□□□ 0.17
PDLIM5-212ENST00000509333 CD84Q9UIB8 345 aa16.1■□□□□ 0.17
PDLIM5-212ENST00000509333 FRYQ5TBA9 3013 aa16.09■□□□□ 0.17
PDLIM5-212ENST00000509333 RGSL1A5PLK6 1076 aa16.09■□□□□ 0.17
PDLIM5-212ENST00000509333 FAM149AA5PLN7 773 aa16.09■□□□□ 0.17
PDLIM5-212ENST00000509333 SOD1P00441 154 aa16.09■□□□□ 0.17
PDLIM5-212ENST00000509333 EPOP01588 193 aa16.09■□□□□ 0.17
PDLIM5-212ENST00000509333 ANXA6P08133 673 aa16.09■□□□□ 0.17
PDLIM5-212ENST00000509333 RBL1P28749 1068 aa16.09■□□□□ 0.17
PDLIM5-212ENST00000509333 CETN2P41208 172 aa16.09■□□□□ 0.17
PDLIM5-212ENST00000509333 SPINT3P49223 89 aa16.09■□□□□ 0.17
PDLIM5-212ENST00000509333 DUSP3P51452 185 aaPredicted RBP16.09■□□□□ 0.17
PDLIM5-212ENST00000509333 CDK3Q00526 305 aa16.09■□□□□ 0.17
PDLIM5-212ENST00000509333 OTUD4Q01804 1114 aaKnown RBP16.09■□□□□ 0.17
PDLIM5-212ENST00000509333 NOMO1Q15155 1222 aa16.09■□□□□ 0.17
PDLIM5-212ENST00000509333 ELOCQ15369 112 aa16.09■□□□□ 0.17
PDLIM5-212ENST00000509333 OGFOD3Q6PK18 319 aa16.09■□□□□ 0.17
PDLIM5-212ENST00000509333 KDELC1Q6UW63 502 aa16.09■□□□□ 0.17
PDLIM5-212ENST00000509333 UNQ6494/PRO21346Q6UXR6 183 aa16.09■□□□□ 0.17
PDLIM5-212ENST00000509333 ADAMTSL4Q6UY14 1074 aa16.09■□□□□ 0.17
PDLIM5-212ENST00000509333 ZNF765Q7L2R6 523 aa16.09■□□□□ 0.17
PDLIM5-212ENST00000509333 TMC3Q7Z5M5 1100 aa16.09■□□□□ 0.17
PDLIM5-212ENST00000509333 HEATR4Q86WZ0 1026 aa16.09■□□□□ 0.17
PDLIM5-212ENST00000509333 LRRC8AQ8IWT6 810 aa16.09■□□□□ 0.17
PDLIM5-212ENST00000509333 CACTIN-AS1Q8N1I8 211 aa16.09■□□□□ 0.17
PDLIM5-212ENST00000509333 HES6Q96HZ4 224 aa16.09■□□□□ 0.17
PDLIM5-212ENST00000509333 QKIQ96PU8 341 aaKnown RBP eCLIP16.09■□□□□ 0.174e-24■■■■■ 117.3
PDLIM5-212ENST00000509333 RIOK2Q9BVS4 552 aaKnown RBP16.09■□□□□ 0.17
PDLIM5-212ENST00000509333 FRMD8Q9BZ67 464 aaPredicted RBP16.09■□□□□ 0.17
PDLIM5-212ENST00000509333 UBP1Q9NZI7 540 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms