RNA–Protein interactions for RNA: ENST00000508308.1

HMGN1P16-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 16, humanhuman

BASIC

Gene HMGN1P16, Length 283 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P16-201ENST00000508308 SCG3Q8WXD2 468 aaKnown RBP6.44□□□□□ -1.38
HMGN1P16-201ENST00000508308 MCCC1Q96RQ3 725 aaPredicted RBP6.44□□□□□ -1.38
HMGN1P16-201ENST00000508308 CINPQ9BW66 212 aaPredicted RBP6.44□□□□□ -1.38
HMGN1P16-201ENST00000508308 TEX101Q9BY14 249 aa6.44□□□□□ -1.38
HMGN1P16-201ENST00000508308 FRMD8Q9BZ67 464 aaPredicted RBP6.44□□□□□ -1.38
HMGN1P16-201ENST00000508308 ISCUQ9H1K1 167 aa6.44□□□□□ -1.38
HMGN1P16-201ENST00000508308 SEMA6CQ9H3T2 930 aa6.44□□□□□ -1.38
HMGN1P16-201ENST00000508308 SYNDIG1Q9H7V2 258 aa6.44□□□□□ -1.38
HMGN1P16-201ENST00000508308 SP110Q9HB58 689 aa6.44□□□□□ -1.38
HMGN1P16-201ENST00000508308 EPB41L5Q9HCM4 733 aa6.44□□□□□ -1.38
HMGN1P16-201ENST00000508308 CYP4F12Q9HCS2 524 aa6.44□□□□□ -1.38
HMGN1P16-201ENST00000508308 FOXJ2Q9P0K8 574 aa6.44□□□□□ -1.38
HMGN1P16-201ENST00000508308 LRIT1Q9P2V4 623 aa6.44□□□□□ -1.38
HMGN1P16-201ENST00000508308 CNOT8Q9UFF9 292 aaKnown RBP6.44□□□□□ -1.38
HMGN1P16-201ENST00000508308 PLEKHM1Q9Y4G2 1056 aa6.44□□□□□ -1.38
HMGN1P16-201ENST00000508308 NBASA2RRP1 2371 aa6.43□□□□□ -1.38
HMGN1P16-201ENST00000508308 PRAMEF33A0A0G2JMD5 474 aa6.43□□□□□ -1.38
HMGN1P16-201ENST00000508308 A0A1W2PQC6 194 aa6.43□□□□□ -1.38
HMGN1P16-201ENST00000508308 PRSS38A1L453 326 aa6.43□□□□□ -1.38
HMGN1P16-201ENST00000508308 B4DGG1 531 aa6.43□□□□□ -1.38
HMGN1P16-201ENST00000508308 C9orf172C9J069 976 aa6.43□□□□□ -1.38
HMGN1P16-201ENST00000508308 PYCARD-AS1I3L0S3 204 aa6.43□□□□□ -1.38
HMGN1P16-201ENST00000508308 AGRPO00253 132 aa6.43□□□□□ -1.38
HMGN1P16-201ENST00000508308 CACNB4O00305 520 aaPredicted RBP6.43□□□□□ -1.38
HMGN1P16-201ENST00000508308 NVLO15381 856 aaKnown RBP6.43□□□□□ -1.38
HMGN1P16-201ENST00000508308 DAPK3O43293 454 aa6.43□□□□□ -1.38
HMGN1P16-201ENST00000508308 NUDT21O43809 227 aaKnown RBP6.43□□□□□ -1.38
HMGN1P16-201ENST00000508308 FZD6O60353 706 aa6.43□□□□□ -1.38
HMGN1P16-201ENST00000508308 PRAMEF10O60809 474 aa6.43□□□□□ -1.38
HMGN1P16-201ENST00000508308 SOCS5O75159 536 aa6.43□□□□□ -1.38
HMGN1P16-201ENST00000508308 HEXIM1O94992 359 aaKnown RBP6.43□□□□□ -1.38
HMGN1P16-201ENST00000508308 PDHA1P08559 390 aa6.43□□□□□ -1.38
HMGN1P16-201ENST00000508308 CD48P09326 243 aa6.43□□□□□ -1.38
HMGN1P16-201ENST00000508308 CCDC172P0C7W6 258 aa6.43□□□□□ -1.38
HMGN1P16-201ENST00000508308 RARAP10276 462 aa6.43□□□□□ -1.38
HMGN1P16-201ENST00000508308 MYCLP1P12525 358 aaPredicted RBP6.43□□□□□ -1.38
HMGN1P16-201ENST00000508308 CCL4P13236 92 aa6.43□□□□□ -1.38
HMGN1P16-201ENST00000508308 CCNB1P14635 433 aa6.43□□□□□ -1.38
HMGN1P16-201ENST00000508308 PNLIPP16233 465 aa6.43□□□□□ -1.38
HMGN1P16-201ENST00000508308 AK4P27144 223 aaPredicted RBP6.43□□□□□ -1.38
HMGN1P16-201ENST00000508308 CD1CP29017 333 aa6.43□□□□□ -1.38
HMGN1P16-201ENST00000508308 ARSEP51690 589 aa6.43□□□□□ -1.38
HMGN1P16-201ENST00000508308 INHBCP55103 352 aa6.43□□□□□ -1.38
HMGN1P16-201ENST00000508308 MAZP56270 477 aaKnown RBP6.43□□□□□ -1.38
HMGN1P16-201ENST00000508308 OR1D5P58170 312 aa6.43□□□□□ -1.38
HMGN1P16-201ENST00000508308 MAXP61244 160 aa6.43□□□□□ -1.38
HMGN1P16-201ENST00000508308 POLR2LP62875 67 aaKnown RBP6.43□□□□□ -1.38
HMGN1P16-201ENST00000508308 NR1I3Q14994 352 aa6.43□□□□□ -1.38
HMGN1P16-201ENST00000508308 NR1D2Q14995 579 aa6.43□□□□□ -1.38
HMGN1P16-201ENST00000508308 C16orf72Q14CZ0 275 aa6.43□□□□□ -1.38
HMGN1P16-201ENST00000508308 IQCB1Q15051 598 aa6.43□□□□□ -1.38
HMGN1P16-201ENST00000508308 ACOX1Q15067 660 aa6.43□□□□□ -1.38
HMGN1P16-201ENST00000508308 ASIC2Q16515 512 aa6.43□□□□□ -1.38
HMGN1P16-201ENST00000508308 SMTNL2Q2TAL5 461 aa6.43□□□□□ -1.38
HMGN1P16-201ENST00000508308 ZSCAN23Q3MJ62 389 aa6.43□□□□□ -1.38
HMGN1P16-201ENST00000508308 TAF1BQ53T94 588 aaPredicted RBP6.43□□□□□ -1.38
HMGN1P16-201ENST00000508308 CCDC183Q5T5S1 534 aa6.43□□□□□ -1.38
HMGN1P16-201ENST00000508308 CFAP58Q5T655 872 aa6.43□□□□□ -1.38
HMGN1P16-201ENST00000508308 TMCO4Q5TGY1 634 aa6.43□□□□□ -1.38
HMGN1P16-201ENST00000508308 CCDC81Q6ZN84 652 aa6.43□□□□□ -1.38
HMGN1P16-201ENST00000508308 Q6ZVL8 140 aa6.43□□□□□ -1.38
HMGN1P16-201ENST00000508308 ZNF438Q7Z4V0 828 aa6.43□□□□□ -1.38
HMGN1P16-201ENST00000508308 TECPR1Q7Z6L1 1165 aa6.43□□□□□ -1.38
HMGN1P16-201ENST00000508308 TAF8Q7Z7C8 310 aa6.43□□□□□ -1.38
HMGN1P16-201ENST00000508308 TSPAN33Q86UF1 283 aa6.43□□□□□ -1.38
HMGN1P16-201ENST00000508308 HEATR4Q86WZ0 1026 aa6.43□□□□□ -1.38
HMGN1P16-201ENST00000508308 ZFAND4Q86XD8 727 aa6.43□□□□□ -1.38
HMGN1P16-201ENST00000508308 DTX1Q86Y01 620 aa6.43□□□□□ -1.38
HMGN1P16-201ENST00000508308 OR6C4Q8NGE1 309 aa6.43□□□□□ -1.38
HMGN1P16-201ENST00000508308 FAM71BQ8TC56 605 aa6.43□□□□□ -1.38
HMGN1P16-201ENST00000508308 PIH1D2Q8WWB5 315 aa6.43□□□□□ -1.38
HMGN1P16-201ENST00000508308 PMEPA1Q969W9 287 aa6.43□□□□□ -1.38
HMGN1P16-201ENST00000508308 ZNF653Q96CK0 615 aa6.43□□□□□ -1.38
HMGN1P16-201ENST00000508308 NUS1Q96E22 293 aa6.43□□□□□ -1.38
HMGN1P16-201ENST00000508308 DTD2Q96FN9 168 aa6.43□□□□□ -1.38
HMGN1P16-201ENST00000508308 MED8Q96G25 268 aa6.43□□□□□ -1.38
HMGN1P16-201ENST00000508308 SCARF2Q96GP6 870 aaPredicted RBP6.43□□□□□ -1.38
HMGN1P16-201ENST00000508308 BTBD6Q96KE9 485 aa6.43□□□□□ -1.38
HMGN1P16-201ENST00000508308 ZNF599Q96NL3 588 aa6.43□□□□□ -1.38
HMGN1P16-201ENST00000508308 CSPG4P5Q96PW8 444 aa6.43□□□□□ -1.38
HMGN1P16-201ENST00000508308 NUDCD1Q96RS6 583 aa6.43□□□□□ -1.38
HMGN1P16-201ENST00000508308 CCNL2Q96S94 520 aaPredicted RBP6.43□□□□□ -1.38
HMGN1P16-201ENST00000508308 MGME1Q9BQP7 344 aa6.43□□□□□ -1.38
HMGN1P16-201ENST00000508308 BPIFA3Q9BQP9 254 aa6.43□□□□□ -1.38
HMGN1P16-201ENST00000508308 WDR26Q9H7D7 661 aa6.43□□□□□ -1.38
HMGN1P16-201ENST00000508308 RDH14Q9HBH5 336 aa6.43□□□□□ -1.38
HMGN1P16-201ENST00000508308 PCDH18Q9HCL0 1135 aa6.43□□□□□ -1.38
HMGN1P16-201ENST00000508308 DONSONQ9NYP3 566 aa6.43□□□□□ -1.38
HMGN1P16-201ENST00000508308 MYO1AQ9UBC5 1043 aa6.43□□□□□ -1.38
HMGN1P16-201ENST00000508308 PISDQ9UG56 409 aa6.43□□□□□ -1.38
HMGN1P16-201ENST00000508308 SEPT3Q9UH03 358 aa6.43□□□□□ -1.38
HMGN1P16-201ENST00000508308 DOLKQ9UPQ8 538 aa6.43□□□□□ -1.38
HMGN1P16-201ENST00000508308 PPIL1Q9Y3C6 166 aa6.43□□□□□ -1.38
HMGN1P16-201ENST00000508308 PCYT1BQ9Y5K3 369 aaPredicted RBP6.43□□□□□ -1.38
HMGN1P16-201ENST00000508308 UTP20O75691 2785 aaKnown RBP6.43□□□□□ -1.38
HMGN1P16-201ENST00000508308 LRRK2Q5S007 2527 aa6.42□□□□□ -1.38
HMGN1P16-201ENST00000508308 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.42□□□□□ -1.38
HMGN1P16-201ENST00000508308 CYSRT1A8MQ03 144 aa6.42□□□□□ -1.38
HMGN1P16-201ENST00000508308 B8ZZF3 427 aa6.42□□□□□ -1.38
HMGN1P16-201ENST00000508308 PPM1DO15297 605 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms