RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 EEF1A2Q05639 463 aaKnown RBP7.52□□□□□ -1.2
PDGFRA-206ENST00000508170 RASGEF1BQ0VAM2 473 aa7.52□□□□□ -1.2
PDGFRA-206ENST00000508170 GRAPQ13588 217 aa7.52□□□□□ -1.2
PDGFRA-206ENST00000508170 MTHFSDQ2M296 383 aaKnown RBP7.52□□□□□ -1.2
PDGFRA-206ENST00000508170 LRRC24Q50LG9 513 aa7.52□□□□□ -1.2
PDGFRA-206ENST00000508170 HIKESHIQ53FT3 197 aa7.52□□□□□ -1.2
PDGFRA-206ENST00000508170 DCST1Q5T197 706 aa7.52□□□□□ -1.2
PDGFRA-206ENST00000508170 EEF1A1P5Q5VTE0 462 aa7.52□□□□□ -1.2
PDGFRA-206ENST00000508170 E4F1Q66K89 784 aaPredicted RBP7.52□□□□□ -1.2
PDGFRA-206ENST00000508170 BLOC1S2Q6QNY1 142 aa7.52□□□□□ -1.2
PDGFRA-206ENST00000508170 AKAP14Q86UN6 197 aa7.52□□□□□ -1.2
PDGFRA-206ENST00000508170 CCDC155Q8N6L0 562 aa7.52□□□□□ -1.2
PDGFRA-206ENST00000508170 ZNF366Q8N895 744 aa7.52□□□□□ -1.2
PDGFRA-206ENST00000508170 SEC14L1Q92503 715 aa7.52□□□□□ -1.2
PDGFRA-206ENST00000508170 DLG3Q92796 817 aa7.52□□□□□ -1.2
PDGFRA-206ENST00000508170 GATA6Q92908 595 aa7.52□□□□□ -1.2
PDGFRA-206ENST00000508170 WDR89Q96FK6 387 aaPredicted RBP7.52□□□□□ -1.2
PDGFRA-206ENST00000508170 PRR11Q96HE9 360 aaPredicted RBP7.52□□□□□ -1.2
PDGFRA-206ENST00000508170 ZNF577Q9BSK1 485 aa7.52□□□□□ -1.2
PDGFRA-206ENST00000508170 SLC4A5Q9BY07 1137 aa7.52□□□□□ -1.2
PDGFRA-206ENST00000508170 RPF1Q9H9Y2 349 aaKnown RBP7.52□□□□□ -1.2
PDGFRA-206ENST00000508170 MPP6Q9NZW5 540 aa7.52□□□□□ -1.2
PDGFRA-206ENST00000508170 CLEC1BQ9P126 229 aa7.52□□□□□ -1.2
PDGFRA-206ENST00000508170 PRSS50Q9UI38 385 aa7.52□□□□□ -1.2
PDGFRA-206ENST00000508170 VPS51Q9UID3 782 aa7.52□□□□□ -1.2
PDGFRA-206ENST00000508170 VPS4AQ9UN37 437 aa7.52□□□□□ -1.2
PDGFRA-206ENST00000508170 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.52□□□□□ -1.21
PDGFRA-206ENST00000508170 UHRF1BP1LA0JNW5 1464 aa7.52□□□□□ -1.21
PDGFRA-206ENST00000508170 MAN2B1O00754 1011 aa7.52□□□□□ -1.21
PDGFRA-206ENST00000508170 ST8SIA3O43173 380 aa7.52□□□□□ -1.21
PDGFRA-206ENST00000508170 APOL3O95236 402 aa7.52□□□□□ -1.21
PDGFRA-206ENST00000508170 PRKCHP24723 683 aa7.52□□□□□ -1.21
PDGFRA-206ENST00000508170 SOAT1P35610 550 aa7.52□□□□□ -1.21
PDGFRA-206ENST00000508170 CLDN8P56748 225 aa7.52□□□□□ -1.21
PDGFRA-206ENST00000508170 RING1Q06587 406 aa7.52□□□□□ -1.21
PDGFRA-206ENST00000508170 KLF10Q13118 480 aa7.52□□□□□ -1.21
PDGFRA-206ENST00000508170 SNW1Q13573 536 aaKnown RBP7.52□□□□□ -1.21
PDGFRA-206ENST00000508170 GPR19Q15760 415 aa7.52□□□□□ -1.21
PDGFRA-206ENST00000508170 SYT16Q17RD7 645 aa7.52□□□□□ -1.21
PDGFRA-206ENST00000508170 ZXDCQ2QGD7 858 aaPredicted RBP7.52□□□□□ -1.21
PDGFRA-206ENST00000508170 KLHL26Q53HC5 615 aa7.52□□□□□ -1.21
PDGFRA-206ENST00000508170 UBAP2Q5T6F2 1119 aaKnown RBP7.52□□□□□ -1.21
PDGFRA-206ENST00000508170 AGBL2Q5U5Z8 902 aa7.52□□□□□ -1.21
PDGFRA-206ENST00000508170 CRTC3Q6UUV7 619 aa7.52□□□□□ -1.21
PDGFRA-206ENST00000508170 SERPINA13PQ6UXR4 307 aa7.52□□□□□ -1.21
PDGFRA-206ENST00000508170 CAMKMTQ7Z624 323 aa7.52□□□□□ -1.21
PDGFRA-206ENST00000508170 ZNF410Q86VK4 478 aa7.52□□□□□ -1.21
PDGFRA-206ENST00000508170 ARHGAP12Q8IWW6 846 aa7.52□□□□□ -1.21
PDGFRA-206ENST00000508170 DSELQ8IZU8 1212 aa7.52□□□□□ -1.21
PDGFRA-206ENST00000508170 ASCC1Q8N9N2 400 aaKnown RBP7.52□□□□□ -1.21
PDGFRA-206ENST00000508170 SMARCC2Q8TAQ2 1214 aa7.52□□□□□ -1.21
PDGFRA-206ENST00000508170 PAQR8Q8TEZ7 354 aa7.52□□□□□ -1.21
PDGFRA-206ENST00000508170 SHISA4Q96DD7 197 aa7.52□□□□□ -1.21
PDGFRA-206ENST00000508170 MYL10Q9BUA6 226 aa7.52□□□□□ -1.21
PDGFRA-206ENST00000508170 DCLK3Q9C098 648 aa7.52□□□□□ -1.21
PDGFRA-206ENST00000508170 SUGCTQ9HAC7 445 aa7.52□□□□□ -1.21
PDGFRA-206ENST00000508170 TDP1Q9NUW8 608 aa7.52□□□□□ -1.21
PDGFRA-206ENST00000508170 COPG2Q9UBF2 871 aa7.52□□□□□ -1.21
PDGFRA-206ENST00000508170 STK17AQ9UEE5 414 aa7.52□□□□□ -1.21
PDGFRA-206ENST00000508170 PLCL2Q9UPR0 1127 aa7.52□□□□□ -1.21
PDGFRA-206ENST00000508170 CDY2AQ9Y6F7 541 aa7.52□□□□□ -1.21
PDGFRA-206ENST00000508170 IQGAP3Q86VI3 1631 aa7.51□□□□□ -1.21
PDGFRA-206ENST00000508170 A0A1W2PNR3 127 aa7.51□□□□□ -1.21
PDGFRA-206ENST00000508170 SAC3D1A6NKF1 404 aa7.51□□□□□ -1.21
PDGFRA-206ENST00000508170 H3BQV1 296 aa7.51□□□□□ -1.21
PDGFRA-206ENST00000508170 J3QW42 95 aa7.51□□□□□ -1.21
PDGFRA-206ENST00000508170 NME6O75414 186 aaPredicted RBP7.51□□□□□ -1.21
PDGFRA-206ENST00000508170 TMCC1O94876 653 aa7.51□□□□□ -1.21
PDGFRA-206ENST00000508170 PGLSO95336 258 aa7.51□□□□□ -1.21
PDGFRA-206ENST00000508170 GNAI2P04899 355 aa7.51□□□□□ -1.21
PDGFRA-206ENST00000508170 ENO1P06733 434 aaKnown RBP7.51□□□□□ -1.21
PDGFRA-206ENST00000508170 GJA1P17302 382 aa7.51□□□□□ -1.21
PDGFRA-206ENST00000508170 MALP21145 153 aa7.51□□□□□ -1.21
PDGFRA-206ENST00000508170 CYP2F1P24903 491 aa7.51□□□□□ -1.21
PDGFRA-206ENST00000508170 GPR4P46093 362 aa7.51□□□□□ -1.21
PDGFRA-206ENST00000508170 FNTAP49354 379 aa7.51□□□□□ -1.21
PDGFRA-206ENST00000508170 SLC26A2P50443 739 aa7.51□□□□□ -1.21
PDGFRA-206ENST00000508170 RAB28P51157 221 aa7.51□□□□□ -1.21
PDGFRA-206ENST00000508170 GPX6P59796 221 aa7.51□□□□□ -1.21
PDGFRA-206ENST00000508170 CDC42EP1Q00587 391 aa7.51□□□□□ -1.21
PDGFRA-206ENST00000508170 PDZK1IP1Q13113 114 aa7.51□□□□□ -1.21
PDGFRA-206ENST00000508170 TARDBPQ13148 414 aaKnown RBP eCLIP7.51□□□□□ -1.21
PDGFRA-206ENST00000508170 KYAT1Q16773 422 aa7.51□□□□□ -1.21
PDGFRA-206ENST00000508170 MPPE1Q53F39 396 aa7.51□□□□□ -1.21
PDGFRA-206ENST00000508170 SLC44A4Q53GD3 710 aa7.51□□□□□ -1.21
PDGFRA-206ENST00000508170 ZNF766Q5HY98 468 aa7.51□□□□□ -1.21
PDGFRA-206ENST00000508170 SAPCD1Q5SSQ6 148 aa7.51□□□□□ -1.21
PDGFRA-206ENST00000508170 THEM4Q5T1C6 240 aa7.51□□□□□ -1.21
PDGFRA-206ENST00000508170 SARM1Q6SZW1 724 aa7.51□□□□□ -1.21
PDGFRA-206ENST00000508170 DPP8Q6V1X1 898 aaPredicted RBP7.51□□□□□ -1.21
PDGFRA-206ENST00000508170 TPGS1Q6ZTW0 290 aa7.51□□□□□ -1.21
PDGFRA-206ENST00000508170 TMC3Q7Z5M5 1100 aa7.51□□□□□ -1.21
PDGFRA-206ENST00000508170 ADAMTSL2Q86TH1 951 aa7.51□□□□□ -1.21
PDGFRA-206ENST00000508170 IQCHQ86VS3 1027 aa7.51□□□□□ -1.21
PDGFRA-206ENST00000508170 MMP21Q8N119 569 aa7.51□□□□□ -1.21
PDGFRA-206ENST00000508170 ANKRD44Q8N8A2 993 aa7.51□□□□□ -1.21
PDGFRA-206ENST00000508170 GALNT11Q8NCW6 608 aa7.51□□□□□ -1.21
PDGFRA-206ENST00000508170 GPR156Q8NFN8 814 aa7.51□□□□□ -1.21
PDGFRA-206ENST00000508170 EEF2KMTQ96G04 330 aa7.51□□□□□ -1.21
PDGFRA-206ENST00000508170 C12orf66Q96MD2 445 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms