RNA–Protein interactions for RNA: ENST00000505746.1

PDLIM7-214, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 405 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-214ENST00000505746 NT5MQ9NPB1 228 aa12.05□□□□□ -0.48
PDLIM7-214ENST00000505746 GOLGA6AQ9NYA3 693 aa12.05□□□□□ -0.48
PDLIM7-214ENST00000505746 TDRD6O60522 2096 aaKnown RBP12.04□□□□□ -0.48
PDLIM7-214ENST00000505746 IGSF10Q6WRI0 2623 aa12.04□□□□□ -0.48
PDLIM7-214ENST00000505746 SYCE3A1L190 88 aa12.04□□□□□ -0.48
PDLIM7-214ENST00000505746 NPIPB15A6NHN6 443 aaPredicted RBP12.04□□□□□ -0.48
PDLIM7-214ENST00000505746 RHPN2P1A8MT19 583 aa12.04□□□□□ -0.48
PDLIM7-214ENST00000505746 K7ENP7 123 aa12.04□□□□□ -0.48
PDLIM7-214ENST00000505746 C1QL1O75973 258 aa12.04□□□□□ -0.48
PDLIM7-214ENST00000505746 CEACAM5P06731 702 aa12.04□□□□□ -0.48
PDLIM7-214ENST00000505746 CTPS1P17812 591 aa12.04□□□□□ -0.48
PDLIM7-214ENST00000505746 PTMSP20962 102 aa12.04□□□□□ -0.48
PDLIM7-214ENST00000505746 LHCGRP22888 699 aa12.04□□□□□ -0.48
PDLIM7-214ENST00000505746 SLC5A2P31639 672 aa12.04□□□□□ -0.48
PDLIM7-214ENST00000505746 GARSP41250 739 aaKnown RBP12.04□□□□□ -0.48
PDLIM7-214ENST00000505746 GNPDA1P46926 289 aa12.04□□□□□ -0.48
PDLIM7-214ENST00000505746 CDK3Q00526 305 aa12.04□□□□□ -0.48
PDLIM7-214ENST00000505746 ZFP36L1Q07352 338 aaKnown RBP12.04□□□□□ -0.48
PDLIM7-214ENST00000505746 DPTQ07507 201 aa12.04□□□□□ -0.48
PDLIM7-214ENST00000505746 CLN3Q13286 438 aa12.04□□□□□ -0.48
PDLIM7-214ENST00000505746 BIRC2Q13490 618 aa12.04□□□□□ -0.48
PDLIM7-214ENST00000505746 PAFAH1B3Q15102 231 aaKnown RBP12.04□□□□□ -0.48
PDLIM7-214ENST00000505746 CLPPQ16740 277 aaPredicted RBP12.04□□□□□ -0.48
PDLIM7-214ENST00000505746 ZSCAN23Q3MJ62 389 aa12.04□□□□□ -0.48
PDLIM7-214ENST00000505746 INO80CQ6PI98 192 aaPredicted RBP12.04□□□□□ -0.48
PDLIM7-214ENST00000505746 MAP7D3Q8IWC1 876 aa12.04□□□□□ -0.48
PDLIM7-214ENST00000505746 ZNF843Q8N446 348 aa12.04□□□□□ -0.48
PDLIM7-214ENST00000505746 KCTD6Q8NC69 237 aa12.04□□□□□ -0.48
PDLIM7-214ENST00000505746 ZDHHC1Q8WTX9 485 aa12.04□□□□□ -0.48
PDLIM7-214ENST00000505746 PIH1D2Q8WWB5 315 aa12.04□□□□□ -0.48
PDLIM7-214ENST00000505746 CCNL2Q96S94 520 aaPredicted RBP12.04□□□□□ -0.48
PDLIM7-214ENST00000505746 CMKLR1Q99788 373 aa12.04□□□□□ -0.48
PDLIM7-214ENST00000505746 SEMA3CQ99985 751 aa12.04□□□□□ -0.48
PDLIM7-214ENST00000505746 SUDS3Q9H7L9 328 aaPredicted RBP12.04□□□□□ -0.48
PDLIM7-214ENST00000505746 SPATS2LQ9NUQ6 558 aaKnown RBP12.04□□□□□ -0.48
PDLIM7-214ENST00000505746 AKAP7Q9P0M2 348 aaPredicted RBP12.04□□□□□ -0.48
PDLIM7-214ENST00000505746 PISDQ9UG56 409 aa12.04□□□□□ -0.48
PDLIM7-214ENST00000505746 AMACRQ9UHK6 382 aa12.04□□□□□ -0.48
PDLIM7-214ENST00000505746 LCMT1Q9UIC8 334 aa12.04□□□□□ -0.48
PDLIM7-214ENST00000505746 ACSL6Q9UKU0 697 aa12.04□□□□□ -0.48
PDLIM7-214ENST00000505746 DNPEPQ9ULA0 475 aa12.04□□□□□ -0.48
PDLIM7-214ENST00000505746 ATXN7L1Q9ULK2 861 aaPredicted RBP12.04□□□□□ -0.48
PDLIM7-214ENST00000505746 SUFUQ9UMX1 484 aa12.04□□□□□ -0.48
PDLIM7-214ENST00000505746 LOXL2Q9Y4K0 774 aa12.04□□□□□ -0.48
PDLIM7-214ENST00000505746 MATN3O15232 486 aa12.03□□□□□ -0.48
PDLIM7-214ENST00000505746 NVLO15381 856 aaKnown RBP12.03□□□□□ -0.48
PDLIM7-214ENST00000505746 FZD6O60353 706 aa12.03□□□□□ -0.48
PDLIM7-214ENST00000505746 FUCA1P04066 466 aa12.03□□□□□ -0.48
PDLIM7-214ENST00000505746 FGF1P05230 155 aa12.03□□□□□ -0.48
PDLIM7-214ENST00000505746 PYGLP06737 847 aa12.03□□□□□ -0.48
PDLIM7-214ENST00000505746 IVLP07476 585 aa12.03□□□□□ -0.48
PDLIM7-214ENST00000505746 CD48P09326 243 aa12.03□□□□□ -0.48
PDLIM7-214ENST00000505746 ZNF30P17039 623 aa12.03□□□□□ -0.48
PDLIM7-214ENST00000505746 CA4P22748 312 aa12.03□□□□□ -0.48
PDLIM7-214ENST00000505746 CCNCP24863 283 aa12.03□□□□□ -0.48
PDLIM7-214ENST00000505746 GPR1P46091 355 aa12.03□□□□□ -0.48
PDLIM7-214ENST00000505746 ARSEP51690 589 aa12.03□□□□□ -0.48
PDLIM7-214ENST00000505746 EPHB1P54762 984 aa12.03□□□□□ -0.48
PDLIM7-214ENST00000505746 B4GALNT1Q00973 533 aa12.03□□□□□ -0.48
PDLIM7-214ENST00000505746 GALNT2Q10471 571 aa12.03□□□□□ -0.48
PDLIM7-214ENST00000505746 MMRN1Q13201 1228 aa12.03□□□□□ -0.48
PDLIM7-214ENST00000505746 DPYSL3Q14195 570 aa12.03□□□□□ -0.48
PDLIM7-214ENST00000505746 PDK2Q15119 407 aa12.03□□□□□ -0.48
PDLIM7-214ENST00000505746 IFI16Q16666 785 aaKnown RBP12.03□□□□□ -0.48
PDLIM7-214ENST00000505746 MAP9Q49MG5 647 aa12.03□□□□□ -0.48
PDLIM7-214ENST00000505746 NCBP2-AS2Q69YL0 99 aa12.03□□□□□ -0.48
PDLIM7-214ENST00000505746 PCSK4Q6UW60 755 aa12.03□□□□□ -0.48
PDLIM7-214ENST00000505746 TECPR1Q7Z6L1 1165 aa12.03□□□□□ -0.48
PDLIM7-214ENST00000505746 ZNF605Q86T29 641 aa12.03□□□□□ -0.48
PDLIM7-214ENST00000505746 TSPAN33Q86UF1 283 aa12.03□□□□□ -0.48
PDLIM7-214ENST00000505746 PIM3Q86V86 326 aa12.03□□□□□ -0.48
PDLIM7-214ENST00000505746 NLRP8Q86W28 1048 aa12.03□□□□□ -0.48
PDLIM7-214ENST00000505746 C17orf82Q86X59 251 aaPredicted RBP12.03□□□□□ -0.48
PDLIM7-214ENST00000505746 NRROSQ86YC3 692 aa12.03□□□□□ -0.48
PDLIM7-214ENST00000505746 SFTPA2Q8IWL1 248 aa12.03□□□□□ -0.48
PDLIM7-214ENST00000505746 ZNF564Q8TBZ8 553 aaPredicted RBP12.03□□□□□ -0.48
PDLIM7-214ENST00000505746 MAML1Q92585 1016 aa12.03□□□□□ -0.48
PDLIM7-214ENST00000505746 FATE1Q969F0 183 aa12.03□□□□□ -0.48
PDLIM7-214ENST00000505746 AP2M1Q96CW1 435 aa12.03□□□□□ -0.48
PDLIM7-214ENST00000505746 TSGA13Q96PP4 275 aa12.03□□□□□ -0.48
PDLIM7-214ENST00000505746 ZNF670Q9BS34 389 aa12.03□□□□□ -0.48
PDLIM7-214ENST00000505746 CDH19Q9H159 772 aa12.03□□□□□ -0.48
PDLIM7-214ENST00000505746 RBM22Q9NW64 420 aaKnown RBP eCLIP12.03□□□□□ -0.48
PDLIM7-214ENST00000505746 WDR70Q9NW82 654 aa12.03□□□□□ -0.48
PDLIM7-214ENST00000505746 SEPT10Q9P0V9 454 aa12.03□□□□□ -0.48
PDLIM7-214ENST00000505746 TAAR2Q9P1P5 351 aa12.03□□□□□ -0.48
PDLIM7-214ENST00000505746 CTTNBP2NLQ9P2B4 639 aa12.03□□□□□ -0.48
PDLIM7-214ENST00000505746 UVRAGQ9P2Y5 699 aa12.03□□□□□ -0.48
PDLIM7-214ENST00000505746 SLC17A4Q9Y2C5 497 aa12.03□□□□□ -0.48
PDLIM7-214ENST00000505746 A0A0J9YYE9 177 aa12.02□□□□□ -0.49
PDLIM7-214ENST00000505746 B4GAT1O43505 415 aa12.02□□□□□ -0.49
PDLIM7-214ENST00000505746 MFSD11O43934 449 aa12.02□□□□□ -0.49
PDLIM7-214ENST00000505746 PROSCO94903 275 aa12.02□□□□□ -0.49
PDLIM7-214ENST00000505746 ECEL1O95672 775 aa12.02□□□□□ -0.49
PDLIM7-214ENST00000505746 CPNE6O95741 557 aa12.02□□□□□ -0.49
PDLIM7-214ENST00000505746 TRBC1P01850 177 aa12.02□□□□□ -0.49
PDLIM7-214ENST00000505746 GYPCP04921 128 aa12.02□□□□□ -0.49
PDLIM7-214ENST00000505746 TPM3P06753 285 aa12.02□□□□□ -0.49
PDLIM7-214ENST00000505746 PDHA1P08559 390 aa12.02□□□□□ -0.49
PDLIM7-214ENST00000505746 KRT7P08729 469 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms