RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 CERKLQ49MI3 558 aaPredicted RBP3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 PLEKHO1Q53GL0 409 aaPredicted RBP3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 ALG10Q5BKT4 473 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 ALG10BQ5I7T1 473 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 ISM2Q6H9L7 571 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 DHRS7BQ6IAN0 325 aaPredicted RBP3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 LRRC8EQ6NSJ5 796 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 CES5AQ6NT32 575 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 CLEC17AQ6ZS10 378 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 FAM43BQ6ZT52 329 aaPredicted RBP3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 MSANTD1Q6ZTZ1 278 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 CAMKMTQ7Z624 323 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 SERPINA11Q86U17 422 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 IQCHQ86VS3 1027 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 RASAL3Q86YV0 1011 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 SCYL3Q8IZE3 742 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 ARL14EPQ8N8R7 260 aaPredicted RBP3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 MCPH1Q8NEM0 835 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 GJC3Q8NFK1 279 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 OR8H1Q8NGG4 311 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 BCAS4Q8TDM0 211 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 ARSGQ96EG1 525 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 RRNAD1Q96FB5 475 aaKnown RBP3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 CLMNQ96JQ2 1002 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 CEP295NLQ96MC4 621 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 FERMT1Q9BQL6 677 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 NUP85Q9BW27 656 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 CDT1Q9H211 546 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 TOR3AQ9H497 397 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 ZNF304Q9HCX3 659 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 WDR6Q9NNW5 1121 aaKnown RBP3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 PIH1D3Q9NQM4 214 aaKnown RBP3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 ADPRHL2Q9NX46 363 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 IL17BQ9UHF5 180 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 DDX25Q9UHL0 483 aaKnown RBP3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 ISY1Q9ULR0 285 aaKnown RBP3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 ERVK-11Q9UQG0 969 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 ZNF148Q9UQR1 794 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 A0A0U1RQK1 487 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 LNP1A1A4G5 178 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 ZNF320A2RRD8 509 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 INPPL1O15357 1258 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 DIAPH2O60879 1101 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 ATP2C2O75185 946 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 TADA2AO75478 443 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 C22orf31O95567 290 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 FTCDO95954 541 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 PLAUP00749 431 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 THEGLP0DJG4 465 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 GJA1P17302 382 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 SRD5A1P18405 259 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 AGAP20933 346 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 MC5RP33032 325 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 RFC1P35251 1148 aaPredicted RBP3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 SLC16A2P36021 539 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 ALDH3A2P51648 485 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 TMF1P82094 1093 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 SORDQ00796 357 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 CXCL9Q07325 125 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 PMPCAQ10713 525 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 RALGDSQ12967 914 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 NAE1Q13564 534 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 MORF4L2Q15014 288 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 SNAPC1Q16533 368 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 CDONQ4KMG0 1287 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 HECTD2Q5U5R9 776 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 FBXO42Q6P3S6 717 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 TAOK1Q7L7X3 1001 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 LINGO2Q7L985 606 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 PIWIL3Q7Z3Z3 882 aaKnown RBP3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 TSPAN33Q86UF1 283 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 TRIM74Q86UV6 250 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 TRIM73Q86UV7 250 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 AACSQ86V21 672 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 WDR63Q8IWG1 891 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 CCDC13Q8IYE1 715 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 C10orf53Q8N6V4 93 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 PI4KAP1Q8N8J0 262 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 IQUBQ8NA54 791 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 SPC24Q8NBT2 197 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 BEST2Q8NFU1 509 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 OR8K5Q8NH50 307 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 OR14L1PQ8NHC6 308 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 HUS1BQ8NHY5 278 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 CAGE1Q8TC20 777 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 GRK7Q8WTQ7 553 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 LINC00476Q8WZB0 136 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 LPGAT1Q92604 370 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 SNAPC3Q92966 411 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 VCPIP1Q96JH7 1222 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 SLC41A2Q96JW4 573 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 PDLIM2Q96JY6 352 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 EGFL8Q99944 293 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 FAM110AQ9BQ89 295 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 TM2D2Q9BX73 214 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 RTN4RQ9BZR6 473 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 TKTL2Q9H0I9 626 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 ST6GALNAC4Q9H4F1 302 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 SLC28A3Q9HAS3 691 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms