RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 C16orf46Q6P387 395 aa3.68□□□□□ -1.82
PCDH11X-208ENST00000504220 CRTC1Q6UUV9 634 aa3.68□□□□□ -1.82
PCDH11X-208ENST00000504220 LRIG3Q6UXM1 1119 aa3.68□□□□□ -1.82
PCDH11X-208ENST00000504220 ZYG11AQ6WRX3 759 aa3.68□□□□□ -1.82
PCDH11X-208ENST00000504220 PTAR1Q7Z6K3 402 aaPredicted RBP3.68□□□□□ -1.82
PCDH11X-208ENST00000504220 FAM160B2Q86V87 743 aa3.68□□□□□ -1.82
PCDH11X-208ENST00000504220 SLC47A2Q86VL8 602 aa3.68□□□□□ -1.82
PCDH11X-208ENST00000504220 CCDC103Q8IW40 242 aa3.68□□□□□ -1.82
PCDH11X-208ENST00000504220 DEFB107AQ8IZN7 70 aa3.68□□□□□ -1.82
PCDH11X-208ENST00000504220 SLC15A4Q8N697 577 aa3.68□□□□□ -1.82
PCDH11X-208ENST00000504220 PCSK9Q8NBP7 692 aaKnown RBP3.68□□□□□ -1.82
PCDH11X-208ENST00000504220 NETO2Q8NC67 525 aa3.68□□□□□ -1.82
PCDH11X-208ENST00000504220 OR6F1Q8NGZ6 308 aa3.68□□□□□ -1.82
PCDH11X-208ENST00000504220 SPPL3Q8TCT6 385 aa3.68□□□□□ -1.82
PCDH11X-208ENST00000504220 NSUN6Q8TEA1 469 aaKnown RBP3.68□□□□□ -1.82
PCDH11X-208ENST00000504220 PYDC1Q8WXC3 89 aa3.68□□□□□ -1.82
PCDH11X-208ENST00000504220 SLC9A6Q92581 669 aa3.68□□□□□ -1.82
PCDH11X-208ENST00000504220 HDAC2Q92769 488 aaKnown RBP3.68□□□□□ -1.82
PCDH11X-208ENST00000504220 KAT5Q92993 513 aa3.68□□□□□ -1.82
PCDH11X-208ENST00000504220 ZNF566Q969W8 418 aa3.68□□□□□ -1.82
PCDH11X-208ENST00000504220 CCDC120Q96HB5 630 aa3.68□□□□□ -1.82
PCDH11X-208ENST00000504220 PRR11Q96HE9 360 aaPredicted RBP3.68□□□□□ -1.82
PCDH11X-208ENST00000504220 KCNK16Q96T55 309 aa3.68□□□□□ -1.82
PCDH11X-208ENST00000504220 CSF3RQ99062 836 aa3.68□□□□□ -1.82
PCDH11X-208ENST00000504220 SEPHS2Q99611 448 aa3.68□□□□□ -1.82
PCDH11X-208ENST00000504220 THUMPD3Q9BV44 507 aaKnown RBP3.68□□□□□ -1.82
PCDH11X-208ENST00000504220 ATXN3LQ9H3M9 355 aa3.68□□□□□ -1.82
PCDH11X-208ENST00000504220 ZNF696Q9H7X3 374 aa3.68□□□□□ -1.82
PCDH11X-208ENST00000504220 PLGRKTQ9HBL7 147 aa3.68□□□□□ -1.82
PCDH11X-208ENST00000504220 SLCO1B3Q9NPD5 702 aa3.68□□□□□ -1.82
PCDH11X-208ENST00000504220 KLK14Q9P0G3 267 aa3.68□□□□□ -1.82
PCDH11X-208ENST00000504220 ADAMTS6Q9UKP5 1117 aa3.68□□□□□ -1.82
PCDH11X-208ENST00000504220 DMTF1Q9Y222 760 aa3.68□□□□□ -1.82
PCDH11X-208ENST00000504220 POLR2AP24928 1970 aaKnown RBP3.68□□□□□ -1.82
PCDH11X-208ENST00000504220 DIDO1Q9BTC0 2240 aaKnown RBP3.68□□□□□ -1.82
PCDH11X-208ENST00000504220 APC2O95996 2303 aa3.68□□□□□ -1.82
PCDH11X-208ENST00000504220 ICE1Q9Y2F5 2266 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 LOC390937A0A1W2PQ73 354 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 RRN3P2A6NIE6 340 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 TISP43B9A030 160 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 PTGES3LE9PB15 166 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 H3BNX3 289 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 EPHB6O15197 1021 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 TM9SF1O15321 606 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 DENRO43583 198 aaKnown RBP3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 USP12O75317 370 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 DLGAP3O95886 979 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 AGR2O95994 175 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 CLPTM1O96005 669 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 GP1BAP07359 652 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 MYL3P08590 195 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 NFICP08651 508 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 TMEM253P0C7T8 217 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 ZNF250P15622 560 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 TPH1P17752 444 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 MAGP20916 626 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 FGFR3P22607 806 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 PRDX6P30041 224 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 PTGS2P35354 604 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 HIRAP54198 1017 aaPredicted RBP3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 PKNOX1P55347 436 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 TPI1P60174 286 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 ABRQ12979 859 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 PLD1Q13393 1074 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 NEDD8Q15843 81 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 OCLNQ16625 522 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 CCDC142Q17RM4 750 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 DNAL1Q4LDG9 190 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 AADACL4Q5VUY2 407 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 ALG1LQ6GMV1 187 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 ANKRD26P1Q6NSI1 321 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 DLEU7Q6UYE1 221 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 LIPIQ6XZB0 460 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 CXXC5Q7LFL8 322 aaKnown RBP3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 POLNQ7Z5Q5 900 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 IGFN1Q86VF2 1251 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 SNX29P2Q8IUI4 249 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 CCDC60Q8IWA6 550 aaPredicted RBP3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 ZNF619Q8N2I2 560 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 MARVELD2Q8N4S9 558 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 TEX47Q8TBZ9 253 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 ACTL9Q8TC94 416 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 TAS1R2Q8TE23 839 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 ZNF384Q8TF68 577 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 PPP1R13LQ8WUF5 828 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 KRT35Q92764 455 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 EMID1Q96A84 441 aaPredicted RBP3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 TUBGCP3Q96CW5 907 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 PHF21BQ96EK2 531 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 SPATA33Q96N06 139 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 GCNAQ96QF7 691 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 IL12RB2Q99665 862 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 ASPSCR1Q9BZE9 553 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 TRIM15Q9C019 465 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 SEMA6AQ9H2E6 1030 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 DCLRE1BQ9H816 532 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 JMJD4Q9H9V9 463 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 CAPN10Q9HC96 672 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 USE1Q9NZ43 259 aa3.67□□□□□ -1.82
PCDH11X-208ENST00000504220 KCMF1Q9P0J7 381 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms