RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 GPT2Q8TD30 523 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 LRRC8CQ8TDW0 803 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 ANKRD49Q8WVL7 239 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 LZICQ8WZA0 190 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 CPT1BQ92523 772 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 ZNF75CPQ92670 426 aaPredicted RBP2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 CDKL2Q92772 493 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 ARHGEF2Q92974 986 aaKnown RBP2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 ARRDC3Q96B67 414 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 ZNF524Q96C55 264 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 PPP1R14BQ96C90 147 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 DTNBP1Q96EV8 351 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 EPSTI1Q96J88 318 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 CCDC138Q96M89 665 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 SCLT1Q96NL6 688 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 RTKNQ9BST9 563 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 MSTO1Q9BUK6 570 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 BARHL1Q9BZE3 327 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 NPFFR1Q9GZQ6 430 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 NACA2Q9H009 215 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 TAOK3Q9H2K8 898 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 ACAD9Q9H845 621 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 CLK4Q9HAZ1 481 aaKnown RBP2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 SH3GLB2Q9NR46 395 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 SLC22A11Q9NSA0 550 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 TCP11L1Q9NUJ3 509 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 GRHL1Q9NZI5 618 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 UPB1Q9UBR1 384 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 KLQ9UEF7 1012 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 FBXO40Q9UH90 709 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 POU2F3Q9UKI9 436 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 PCDHGB3Q9Y5G1 929 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 GPRASP1Q5JY77 1395 aa2.09□□□□□ -2.08
HMGB3P17-201ENST00000504195 KIAA1107Q9UPP5 1409 aa2.08□□□□□ -2.08
HMGB3P17-201ENST00000504195 TAF1P21675 1872 aa2.08□□□□□ -2.08
HMGB3P17-201ENST00000504195 UQCRHLA0A096LP55 91 aa2.08□□□□□ -2.08
HMGB3P17-201ENST00000504195 IQANK1A0A1B0GTG1 560 aa2.08□□□□□ -2.08
HMGB3P17-201ENST00000504195 ANO9A1A5B4 782 aa2.08□□□□□ -2.08
HMGB3P17-201ENST00000504195 GOLGA6L10A6NI86 522 aa2.08□□□□□ -2.08
HMGB3P17-201ENST00000504195 NPIPB11E5RHQ5 1161 aa2.08□□□□□ -2.08
HMGB3P17-201ENST00000504195 H0Y3Z8 333 aa2.08□□□□□ -2.08
HMGB3P17-201ENST00000504195 K7ENM7 598 aa2.08□□□□□ -2.08
HMGB3P17-201ENST00000504195 P2RY10O00398 339 aa2.08□□□□□ -2.08
HMGB3P17-201ENST00000504195 TIMM23O14925 209 aa2.08□□□□□ -2.08
HMGB3P17-201ENST00000504195 RTL8CO15255 209 aa2.08□□□□□ -2.08
HMGB3P17-201ENST00000504195 CYTH3O43739 400 aa2.08□□□□□ -2.08
HMGB3P17-201ENST00000504195 TMCC2O75069 709 aa2.08□□□□□ -2.08
HMGB3P17-201ENST00000504195 TSC22D2O75157 780 aa2.08□□□□□ -2.08
HMGB3P17-201ENST00000504195 GAGE7O76087 117 aa2.08□□□□□ -2.08
HMGB3P17-201ENST00000504195 VNN2O95498 520 aa2.08□□□□□ -2.08
HMGB3P17-201ENST00000504195 PMS2P2O95744 297 aa2.08□□□□□ -2.08
HMGB3P17-201ENST00000504195 S100A6P06703 90 aa2.08□□□□□ -2.08
HMGB3P17-201ENST00000504195 UQCRHP07919 91 aa2.08□□□□□ -2.08
HMGB3P17-201ENST00000504195 GAGE12FP0CL80 117 aa2.08□□□□□ -2.08
HMGB3P17-201ENST00000504195 GAGE12GP0CL81 117 aa2.08□□□□□ -2.08
HMGB3P17-201ENST00000504195 GAGE12IP0CL82 117 aa2.08□□□□□ -2.08
HMGB3P17-201ENST00000504195 IGHV4-30-4P0DP06 118 aa2.08□□□□□ -2.08
HMGB3P17-201ENST00000504195 KRT13P13646 458 aa2.08□□□□□ -2.08
HMGB3P17-201ENST00000504195 DESP17661 470 aa2.08□□□□□ -2.08
HMGB3P17-201ENST00000504195 CYP11B2P19099 503 aa2.08□□□□□ -2.08
HMGB3P17-201ENST00000504195 KCNA5P22460 613 aa2.08□□□□□ -2.08
HMGB3P17-201ENST00000504195 MYF6P23409 242 aa2.08□□□□□ -2.08
HMGB3P17-201ENST00000504195 DCTDP32321 178 aa2.08□□□□□ -2.08
HMGB3P17-201ENST00000504195 LIFRP42702 1097 aa2.08□□□□□ -2.08
HMGB3P17-201ENST00000504195 UBASH3AP57075 661 aa2.08□□□□□ -2.08
HMGB3P17-201ENST00000504195 GEMIN4P57678 1058 aaKnown RBP2.08□□□□□ -2.08
HMGB3P17-201ENST00000504195 NLRP5P59047 1200 aa2.08□□□□□ -2.08
HMGB3P17-201ENST00000504195 BASP1P80723 227 aaKnown RBP2.08□□□□□ -2.08
HMGB3P17-201ENST00000504195 ECT2LQ008S8 904 aa2.08□□□□□ -2.08
HMGB3P17-201ENST00000504195 PLIN5Q00G26 463 aa2.08□□□□□ -2.08
HMGB3P17-201ENST00000504195 ROR1Q01973 937 aa2.08□□□□□ -2.08
HMGB3P17-201ENST00000504195 GRIK3Q13003 919 aa2.08□□□□□ -2.08
HMGB3P17-201ENST00000504195 GAGE1Q13065 139 aa2.08□□□□□ -2.08
HMGB3P17-201ENST00000504195 GAGE4Q13068 117 aa2.08□□□□□ -2.08
HMGB3P17-201ENST00000504195 TBX2Q13207 712 aaPredicted RBP2.08□□□□□ -2.08
HMGB3P17-201ENST00000504195 CRYMQ14894 314 aa2.08□□□□□ -2.08
HMGB3P17-201ENST00000504195 SYCP2LQ5T4T6 812 aa2.08□□□□□ -2.08
HMGB3P17-201ENST00000504195 SFMBT2Q5VUG0 894 aa2.08□□□□□ -2.08
HMGB3P17-201ENST00000504195 TBC1D9BQ66K14 1250 aa2.08□□□□□ -2.08
HMGB3P17-201ENST00000504195 MZT2BQ6NZ67 158 aa2.08□□□□□ -2.08
HMGB3P17-201ENST00000504195 C8orf74Q6P047 294 aa2.08□□□□□ -2.08
HMGB3P17-201ENST00000504195 PLBD1Q6P4A8 553 aa2.08□□□□□ -2.08
HMGB3P17-201ENST00000504195 SUSD1Q6UWL2 747 aa2.08□□□□□ -2.08
HMGB3P17-201ENST00000504195 CCDC129Q6ZRS4 1044 aa2.08□□□□□ -2.08
HMGB3P17-201ENST00000504195 FOXL2NBQ6ZUU3 175 aa2.08□□□□□ -2.08
HMGB3P17-201ENST00000504195 RAB11FIP2Q7L804 512 aa2.08□□□□□ -2.08
HMGB3P17-201ENST00000504195 CATSPER4Q7RTX7 472 aa2.08□□□□□ -2.08
HMGB3P17-201ENST00000504195 KIAA1328Q86T90 577 aa2.08□□□□□ -2.08
HMGB3P17-201ENST00000504195 APLFQ8IW19 511 aaPredicted RBP2.08□□□□□ -2.08
HMGB3P17-201ENST00000504195 TEX11Q8IYF3 940 aa2.08□□□□□ -2.08
HMGB3P17-201ENST00000504195 ARL10Q8N8L6 244 aa2.08□□□□□ -2.08
HMGB3P17-201ENST00000504195 TRIML1Q8N9V2 468 aa2.08□□□□□ -2.08
HMGB3P17-201ENST00000504195 SMYD1Q8NB12 490 aa2.08□□□□□ -2.08
HMGB3P17-201ENST00000504195 OR8H1Q8NGG4 311 aa2.08□□□□□ -2.08
HMGB3P17-201ENST00000504195 TRPC4APQ8TEL6 797 aa2.08□□□□□ -2.08
HMGB3P17-201ENST00000504195 ATOH1Q92858 354 aaPredicted RBP2.08□□□□□ -2.08
HMGB3P17-201ENST00000504195 HERPUD2Q9BSE4 406 aa2.08□□□□□ -2.08
HMGB3P17-201ENST00000504195 RBM4Q9BWF3 364 aaKnown RBP2.08□□□□□ -2.08
HMGB3P17-201ENST00000504195 SPZ1Q9BXG8 430 aa2.08□□□□□ -2.08
HMGB3P17-201ENST00000504195 CAPS2Q9BXY5 557 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 202.3 ms