RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 TPTEP56180 551 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 CSNK2BP67870 215 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 DLG1Q12959 904 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 USP10Q14694 798 aaKnown RBP2.79□□□□□ -1.96
NEDD4-204ENST00000503468 PRKD1Q15139 912 aaPredicted RBP2.79□□□□□ -1.96
NEDD4-204ENST00000503468 TJAP1Q5JTD0 557 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 COL13A1Q5TAT6 717 aaPredicted RBP2.79□□□□□ -1.96
NEDD4-204ENST00000503468 TMEM214Q6NUQ4 689 aaKnown RBP2.79□□□□□ -1.96
NEDD4-204ENST00000503468 PAOXQ6QHF9 649 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 CLEC18BQ6UXF7 455 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 FASTKD5Q7L8L6 764 aaKnown RBP2.79□□□□□ -1.96
NEDD4-204ENST00000503468 STRA8Q7Z7C7 330 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 TLK2Q86UE8 772 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 SATL1Q86VE3 508 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 ARMC8Q8IUR7 673 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 RBFAQ8N0V3 343 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 CLEC18CQ8NCF0 446 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 CAPSLQ8WWF8 208 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 C18orf8Q96DM3 657 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 NACC1Q96RE7 527 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 CGRRF1Q99675 332 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 SEPT5Q99719 369 aaPredicted RBP2.79□□□□□ -1.96
NEDD4-204ENST00000503468 CELF4Q9BZC1 486 aaKnown RBP2.79□□□□□ -1.96
NEDD4-204ENST00000503468 LMAN2LQ9H0V9 348 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 SLA2Q9H6Q3 261 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 SAYSD1Q9NPB0 183 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 AJAP1Q9UKB5 411 aaPredicted RBP2.79□□□□□ -1.96
NEDD4-204ENST00000503468 BTBD3Q9Y2F9 522 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 PCDHGA10Q9Y5H3 936 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 MYOFQ9NZM1 2061 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 A0A0U1RQJ8 604 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 CAPN8A6NHC0 703 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 A8MUI8 341 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 GAPDHSO14556 408 aaPredicted RBP2.79□□□□□ -1.96
NEDD4-204ENST00000503468 LPXNO60711 386 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 ADAM23O75077 832 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 TADA2AO75478 443 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 BCAS2O75934 225 aaPredicted RBP2.79□□□□□ -1.96
NEDD4-204ENST00000503468 KAT7O95251 611 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 ITGAVP06756 1048 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 KRT7P08729 469 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 ENO2P09104 434 aaPredicted RBP2.79□□□□□ -1.96
NEDD4-204ENST00000503468 IQCF3P0C7M6 154 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 NPR3P17342 541 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 AMPD1P23109 780 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 GLRA2P23416 452 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 ADRA1DP25100 572 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 RBL1P28749 1068 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 SLC7A1P30825 629 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 ITGA8P53708 1063 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 P2RX3P56373 397 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 SNAP25P60880 206 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 IGBP1P78318 339 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 ARID5AQ03989 594 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 MPP2Q14168 576 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 ACOX1Q15067 660 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 LRIT3Q3SXY7 679 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 FCRLBQ6BAA4 426 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 ITPRIPL1Q6GPH6 555 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 CHST3Q7LGC8 479 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 ZNF571Q7Z3V5 609 aaPredicted RBP2.79□□□□□ -1.96
NEDD4-204ENST00000503468 RNF135Q8IUD6 432 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 MPP5Q8N3R9 675 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 TMIEQ8NEW7 156 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 BSNDQ8WZ55 320 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 TREX2Q9BQ50 279 aaPredicted RBP2.79□□□□□ -1.96
NEDD4-204ENST00000503468 ZNF426Q9BUY5 554 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 ING2Q9H160 280 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 MMP27Q9H306 513 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 OR51B5Q9H339 312 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 POLR1BQ9H9Y6 1135 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 ANLNQ9NQW6 1124 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 DNAJC28Q9NX36 388 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 PCDHGB3Q9Y5G1 929 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 KAT6AQ92794 2004 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 MEI4A8MW99 385 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 H0YAE9 185 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 TRIM38O00635 465 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 TLR3O15455 904 aaKnown RBP2.79□□□□□ -1.96
NEDD4-204ENST00000503468 UMPSP11172 480 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 MYCLP1P12525 358 aaPredicted RBP2.79□□□□□ -1.96
NEDD4-204ENST00000503468 PEX2P28328 305 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 CLCN4P51793 760 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 TIAL1Q01085 375 aaKnown RBP eCLIP2.79□□□□□ -1.96
NEDD4-204ENST00000503468 ZNF45Q02386 682 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 TNFAIP2Q03169 654 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 BFSP1Q12934 665 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 BNIP2Q12982 314 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 TAB1Q15750 504 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 PLEKHG6Q3KR16 790 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 INO80DQ53TQ3 878 aaPredicted RBP2.79□□□□□ -1.96
NEDD4-204ENST00000503468 ZC3H12BQ5HYM0 836 aaKnown RBP2.79□□□□□ -1.96
NEDD4-204ENST00000503468 AGAP6Q5VW22 663 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 GAREM2Q75VX8 874 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 TBC1D21Q8IYX1 336 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 ELMOD2Q8IZ81 293 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 ADGRF2Q8IZF7 708 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 AADATQ8N5Z0 425 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 SETD9Q8NE22 299 aa2.79□□□□□ -1.96
NEDD4-204ENST00000503468 SLC22A17Q8WUG5 538 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms