RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 RFPL1O75677 317 aa17.22■□□□□ 0.35
HMGXB3-201ENST00000502717 PAOXQ6QHF9 649 aa17.22■□□□□ 0.35
HMGXB3-201ENST00000502717 ABHD15Q6UXT9 468 aa17.22■□□□□ 0.35
HMGXB3-201ENST00000502717 CCDC149Q6ZUS6 474 aa17.22■□□□□ 0.35
HMGXB3-201ENST00000502717 ZNF567Q8N184 647 aa17.22■□□□□ 0.35
HMGXB3-201ENST00000502717 FAM124BQ9H5Z6 455 aaPredicted RBP17.22■□□□□ 0.35
HMGXB3-201ENST00000502717 CCDC162PA2VCL2 907 aa17.21■□□□□ 0.35
HMGXB3-201ENST00000502717 USP17L7P0C7H9 530 aa17.21■□□□□ 0.35
HMGXB3-201ENST00000502717 POLR2JP52435 117 aaKnown RBP17.21■□□□□ 0.35
HMGXB3-201ENST00000502717 IKBKEQ14164 716 aa17.21■□□□□ 0.35
HMGXB3-201ENST00000502717 HIST2H2ACQ16777 129 aaPredicted RBP17.21■□□□□ 0.35
HMGXB3-201ENST00000502717 DGKKQ5KSL6 1271 aa17.21■□□□□ 0.35
HMGXB3-201ENST00000502717 RBM48Q5RL73 367 aaKnown RBP17.21■□□□□ 0.35
HMGXB3-201ENST00000502717 HIST2H2AA3Q6FI13 130 aa17.21■□□□□ 0.35
HMGXB3-201ENST00000502717 MPP5Q8N3R9 675 aa17.21■□□□□ 0.35
HMGXB3-201ENST00000502717 CDYL2Q8N8U2 506 aa17.21■□□□□ 0.35
HMGXB3-201ENST00000502717 FAR1Q8WVX9 515 aa17.21■□□□□ 0.35
HMGXB3-201ENST00000502717 ISOC1Q96CN7 298 aa17.21■□□□□ 0.35
HMGXB3-201ENST00000502717 P2RX7Q99572 595 aaKnown RBP17.21■□□□□ 0.35
HMGXB3-201ENST00000502717 IFT80Q9P2H3 777 aaPredicted RBP17.21■□□□□ 0.35
HMGXB3-201ENST00000502717 OPTCQ9UBM4 332 aa17.21■□□□□ 0.35
HMGXB3-201ENST00000502717 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.21■□□□□ 0.35
HMGXB3-201ENST00000502717 STX16-NPEPL1H3BU86 382 aa17.21■□□□□ 0.35
HMGXB3-201ENST00000502717 J3QRK9 145 aa17.21■□□□□ 0.35
HMGXB3-201ENST00000502717 B3GAT3O94766 335 aa17.21■□□□□ 0.35
HMGXB3-201ENST00000502717 IGFBP4P22692 258 aa17.21■□□□□ 0.35
HMGXB3-201ENST00000502717 ZNF177Q13360 481 aaPredicted RBP17.21■□□□□ 0.35
HMGXB3-201ENST00000502717 EEF1DP3Q658K8 133 aa17.21■□□□□ 0.35
HMGXB3-201ENST00000502717 XKR5Q6UX68 686 aa17.21■□□□□ 0.35
HMGXB3-201ENST00000502717 ZNF621Q6ZSS3 439 aa17.21■□□□□ 0.35
HMGXB3-201ENST00000502717 FLCNQ8NFG4 579 aa17.21■□□□□ 0.35
HMGXB3-201ENST00000502717 TWIST2Q8WVJ9 160 aa17.21■□□□□ 0.35
HMGXB3-201ENST00000502717 FBXL8Q96CD0 374 aa17.21■□□□□ 0.35
HMGXB3-201ENST00000502717 MAGEE1Q9HCI5 957 aa17.21■□□□□ 0.35
HMGXB3-201ENST00000502717 TLL2Q9Y6L7 1015 aa17.21■□□□□ 0.35
HMGXB3-201ENST00000502717 SLC22A1O15245 554 aa17.21■□□□□ 0.35
HMGXB3-201ENST00000502717 PQBP1O60828 265 aaKnown RBP17.21■□□□□ 0.35
HMGXB3-201ENST00000502717 FADS2O95864 444 aaKnown RBP17.21■□□□□ 0.35
HMGXB3-201ENST00000502717 CNTN1Q12860 1018 aa17.21■□□□□ 0.35
HMGXB3-201ENST00000502717 FAM91A1Q658Y4 838 aa17.21■□□□□ 0.35
HMGXB3-201ENST00000502717 SVOPLQ8N434 492 aa17.21■□□□□ 0.35
HMGXB3-201ENST00000502717 NETO2Q8NC67 525 aa17.21■□□□□ 0.35
HMGXB3-201ENST00000502717 TADA1Q96BN2 335 aa17.21■□□□□ 0.35
HMGXB3-201ENST00000502717 ABI2Q9NYB9 513 aaPredicted RBP17.21■□□□□ 0.35
HMGXB3-201ENST00000502717 SAMHD1Q9Y3Z3 626 aaKnown RBP17.21■□□□□ 0.35
HMGXB3-201ENST00000502717 SLC11A2P49281 568 aa17.21■□□□□ 0.35
HMGXB3-201ENST00000502717 MRPS5P82675 430 aaKnown RBP17.21■□□□□ 0.35
HMGXB3-201ENST00000502717 SCIMPQ6UWF3 145 aa17.21■□□□□ 0.35
HMGXB3-201ENST00000502717 CATSPERGQ6ZRH7 1159 aa17.21■□□□□ 0.35
HMGXB3-201ENST00000502717 KIAA0408Q6ZU52 694 aa17.21■□□□□ 0.35
HMGXB3-201ENST00000502717 TFAP2DQ7Z6R9 452 aa17.21■□□□□ 0.35
HMGXB3-201ENST00000502717 RAB43Q86YS6 212 aa17.21■□□□□ 0.35
HMGXB3-201ENST00000502717 MIB1Q86YT6 1006 aa17.21■□□□□ 0.35
HMGXB3-201ENST00000502717 PRR11Q96HE9 360 aaPredicted RBP17.21■□□□□ 0.35
HMGXB3-201ENST00000502717 B3GNT5Q9BYG0 378 aa17.21■□□□□ 0.35
HMGXB3-201ENST00000502717 NMRK2Q9NPI5 230 aa17.21■□□□□ 0.35
HMGXB3-201ENST00000502717 ZNF99A8MXY4 864 aaPredicted RBP17.2■□□□□ 0.34
HMGXB3-201ENST00000502717 ADM5C9JUS6 153 aa17.2■□□□□ 0.34
HMGXB3-201ENST00000502717 H0YJX3 145 aa17.2■□□□□ 0.34
HMGXB3-201ENST00000502717 H7C4K7 107 aa17.2■□□□□ 0.34
HMGXB3-201ENST00000502717 DHX15O43143 795 aaKnown RBP17.2■□□□□ 0.34
HMGXB3-201ENST00000502717 CFHP08603 1231 aa17.2■□□□□ 0.34
HMGXB3-201ENST00000502717 PORP16435 677 aaPredicted RBP17.2■□□□□ 0.34
HMGXB3-201ENST00000502717 ZNF7P17097 686 aaPredicted RBP17.2■□□□□ 0.34
HMGXB3-201ENST00000502717 PTPN1P18031 435 aaKnown RBP17.2■□□□□ 0.34
HMGXB3-201ENST00000502717 PCLAFQ15004 111 aa17.2■□□□□ 0.34
HMGXB3-201ENST00000502717 ACAP2Q15057 778 aa17.2■□□□□ 0.34
HMGXB3-201ENST00000502717 CARTPTQ16568 116 aa17.2■□□□□ 0.34
HMGXB3-201ENST00000502717 MGAT5BQ3V5L5 792 aa17.2■□□□□ 0.34
HMGXB3-201ENST00000502717 UTS2BQ765I0 119 aa17.2■□□□□ 0.34
HMGXB3-201ENST00000502717 STARD8Q92502 1023 aa17.2■□□□□ 0.34
HMGXB3-201ENST00000502717 TDRD1Q9BXT4 1180 aaKnown RBP17.2■□□□□ 0.34
HMGXB3-201ENST00000502717 GBA3Q9H227 469 aa17.2■□□□□ 0.34
HMGXB3-201ENST00000502717 ZBTB26Q9HCK0 441 aa17.2■□□□□ 0.34
HMGXB3-201ENST00000502717 SNED1Q8TER0 1413 aa17.2■□□□□ 0.34
HMGXB3-201ENST00000502717 A0A1W2PPW3 197 aa17.2■□□□□ 0.34
HMGXB3-201ENST00000502717 SYNDIG1LA6NDD5 238 aa17.2■□□□□ 0.34
HMGXB3-201ENST00000502717 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.2■□□□□ 0.34
HMGXB3-201ENST00000502717 TSPAN9O75954 239 aa17.2■□□□□ 0.34
HMGXB3-201ENST00000502717 CLPXO76031 633 aa17.2■□□□□ 0.34
HMGXB3-201ENST00000502717 GRK3P35626 688 aa17.2■□□□□ 0.34
HMGXB3-201ENST00000502717 HALP42357 657 aa17.2■□□□□ 0.34
HMGXB3-201ENST00000502717 NRLP54845 237 aa17.2■□□□□ 0.34
HMGXB3-201ENST00000502717 ELAVL2Q12926 359 aaKnown RBP17.2■□□□□ 0.34
HMGXB3-201ENST00000502717 PHKG1Q16816 387 aa17.2■□□□□ 0.34
HMGXB3-201ENST00000502717 SERPINB11Q96P15 392 aa17.2■□□□□ 0.34
HMGXB3-201ENST00000502717 ARHGEF4Q9NR80 690 aa17.2■□□□□ 0.34
HMGXB3-201ENST00000502717 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.2■□□□□ 0.34
HMGXB3-201ENST00000502717 GSTK1Q9Y2Q3 226 aa17.2■□□□□ 0.34
HMGXB3-201ENST00000502717 TMCC2O75069 709 aa17.2■□□□□ 0.34
HMGXB3-201ENST00000502717 ARIH2O95376 493 aa17.2■□□□□ 0.34
HMGXB3-201ENST00000502717 MT-ND1P03886 318 aa17.2■□□□□ 0.34
HMGXB3-201ENST00000502717 CNTN2Q02246 1040 aa17.2■□□□□ 0.34
HMGXB3-201ENST00000502717 SLC25A11Q02978 314 aaKnown RBP17.2■□□□□ 0.34
HMGXB3-201ENST00000502717 PRKCQQ04759 706 aa17.2■□□□□ 0.34
HMGXB3-201ENST00000502717 ZNF423Q2M1K9 1284 aa17.2■□□□□ 0.34
HMGXB3-201ENST00000502717 ERMP1Q7Z2K6 904 aa17.2■□□□□ 0.34
HMGXB3-201ENST00000502717 TMEM110Q86TL2 294 aa17.2■□□□□ 0.34
HMGXB3-201ENST00000502717 IGDCC3Q8IVU1 814 aa17.2■□□□□ 0.34
HMGXB3-201ENST00000502717 AZIN2Q96A70 460 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms