RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 MRPL58Q14197 206 aaKnown RBP9.85□□□□□ -0.83
CLIP1-204ENST00000501271 MGAT5BQ3V5L5 792 aa9.85□□□□□ -0.83
CLIP1-204ENST00000501271 C6orf10Q5SRN2 563 aa9.85□□□□□ -0.83
CLIP1-204ENST00000501271 C8orf82Q6P1X6 216 aaPredicted RBP9.85□□□□□ -0.83
CLIP1-204ENST00000501271 RSPO2Q6UXX9 243 aaPredicted RBP9.85□□□□□ -0.83
CLIP1-204ENST00000501271 SATL1Q86VE3 508 aa9.85□□□□□ -0.83
CLIP1-204ENST00000501271 FUNDC1Q8IVP5 155 aa9.85□□□□□ -0.83
CLIP1-204ENST00000501271 GALNT4Q8N4A0 578 aa9.85□□□□□ -0.83
CLIP1-204ENST00000501271 CATSPER1Q8NEC5 780 aa9.85□□□□□ -0.83
CLIP1-204ENST00000501271 GPR150Q8NGU9 434 aa9.85□□□□□ -0.83
CLIP1-204ENST00000501271 NSMCE3Q96MG7 304 aa9.85□□□□□ -0.83
CLIP1-204ENST00000501271 NSUN5Q96P11 429 aaKnown RBP9.85□□□□□ -0.83
CLIP1-204ENST00000501271 FAM193BQ96PV7 902 aaPredicted RBP9.85□□□□□ -0.83
CLIP1-204ENST00000501271 SLC25A23Q9BV35 468 aa9.85□□□□□ -0.83
CLIP1-204ENST00000501271 SPAG4Q9NPE6 437 aa9.85□□□□□ -0.83
CLIP1-204ENST00000501271 OLA1Q9NTK5 396 aaKnown RBP9.85□□□□□ -0.83
CLIP1-204ENST00000501271 CATSPERZQ9NTU4 200 aa9.85□□□□□ -0.83
CLIP1-204ENST00000501271 MRGBPQ9NV56 204 aa9.85□□□□□ -0.83
CLIP1-204ENST00000501271 GMPR2Q9P2T1 348 aaKnown RBP9.85□□□□□ -0.83
CLIP1-204ENST00000501271 HCSTQ9UBK5 93 aa9.85□□□□□ -0.83
CLIP1-204ENST00000501271 MTMR11A4FU01 709 aa9.85□□□□□ -0.83
CLIP1-204ENST00000501271 NRP2O60462 931 aa9.85□□□□□ -0.83
CLIP1-204ENST00000501271 CDK14O94921 469 aa9.85□□□□□ -0.83
CLIP1-204ENST00000501271 PGM3O95394 542 aa9.85□□□□□ -0.83
CLIP1-204ENST00000501271 PABPC4LP0CB38 370 aaKnown RBP9.85□□□□□ -0.83
CLIP1-204ENST00000501271 TACR2P21452 398 aa9.85□□□□□ -0.83
CLIP1-204ENST00000501271 HOXD9P28356 352 aaPredicted RBP9.85□□□□□ -0.83
CLIP1-204ENST00000501271 GSTT1P30711 240 aa9.85□□□□□ -0.83
CLIP1-204ENST00000501271 SLC6A4P31645 630 aa9.85□□□□□ -0.83
CLIP1-204ENST00000501271 STC1P52823 247 aa9.85□□□□□ -0.83
CLIP1-204ENST00000501271 INHBEP58166 350 aa9.85□□□□□ -0.83
CLIP1-204ENST00000501271 YBEYP58557 167 aaPredicted RBP9.85□□□□□ -0.83
CLIP1-204ENST00000501271 FAM189BP81408 668 aa9.85□□□□□ -0.83
CLIP1-204ENST00000501271 C6orf52Q5T4I8 152 aa9.85□□□□□ -0.83
CLIP1-204ENST00000501271 CWF19L1Q69YN2 538 aaKnown RBP9.85□□□□□ -0.83
CLIP1-204ENST00000501271 MRNIPQ6NTE8 343 aa9.85□□□□□ -0.83
CLIP1-204ENST00000501271 BRSK1Q8TDC3 778 aa9.85□□□□□ -0.83
CLIP1-204ENST00000501271 LPGAT1Q92604 370 aa9.85□□□□□ -0.83
CLIP1-204ENST00000501271 PEX13Q92968 403 aa9.85□□□□□ -0.83
CLIP1-204ENST00000501271 CNBD2Q96M20 576 aa9.85□□□□□ -0.83
CLIP1-204ENST00000501271 KCNA7Q96RP8 456 aa9.85□□□□□ -0.83
CLIP1-204ENST00000501271 ATOH8Q96SQ7 321 aa9.85□□□□□ -0.83
CLIP1-204ENST00000501271 AKTIPQ9H8T0 292 aa9.85□□□□□ -0.83
CLIP1-204ENST00000501271 NMRK2Q9NPI5 230 aa9.85□□□□□ -0.83
CLIP1-204ENST00000501271 EPS15L1Q9UBC2 864 aa9.85□□□□□ -0.83
CLIP1-204ENST00000501271 CD300AQ9UGN4 299 aa9.85□□□□□ -0.83
CLIP1-204ENST00000501271 A0A1B0GTL3 188 aa9.84□□□□□ -0.83
CLIP1-204ENST00000501271 TMEM88BA6NKF7 163 aa9.84□□□□□ -0.83
CLIP1-204ENST00000501271 TLR5O60602 858 aa9.84□□□□□ -0.83
CLIP1-204ENST00000501271 SRP72O76094 671 aaKnown RBP9.84□□□□□ -0.83
CLIP1-204ENST00000501271 RTN3O95197 1032 aaPredicted RBP9.84□□□□□ -0.83
CLIP1-204ENST00000501271 GPX3P22352 226 aa9.84□□□□□ -0.83
CLIP1-204ENST00000501271 GATMP50440 423 aa9.84□□□□□ -0.83
CLIP1-204ENST00000501271 ATP4BP51164 291 aa9.84□□□□□ -0.83
CLIP1-204ENST00000501271 NME5P56597 212 aa9.84□□□□□ -0.83
CLIP1-204ENST00000501271 ROR2Q01974 943 aaKnown RBP9.84□□□□□ -0.83
CLIP1-204ENST00000501271 RING1Q06587 406 aa9.84□□□□□ -0.83
CLIP1-204ENST00000501271 PFKFB4Q16877 469 aa9.84□□□□□ -0.83
CLIP1-204ENST00000501271 TYSND1Q2T9J0 566 aa9.84□□□□□ -0.83
CLIP1-204ENST00000501271 CYP2R1Q6VVX0 501 aa9.84□□□□□ -0.83
CLIP1-204ENST00000501271 RNF19BQ6ZMZ0 732 aa9.84□□□□□ -0.83
CLIP1-204ENST00000501271 RETREG3Q86VR2 466 aa9.84□□□□□ -0.83
CLIP1-204ENST00000501271 LGI2Q8N0V4 545 aa9.84□□□□□ -0.83
CLIP1-204ENST00000501271 CLYBLQ8N0X4 340 aa9.84□□□□□ -0.83
CLIP1-204ENST00000501271 PCSK9Q8NBP7 692 aaKnown RBP9.84□□□□□ -0.83
CLIP1-204ENST00000501271 OR7D4Q8NG98 312 aa9.84□□□□□ -0.83
CLIP1-204ENST00000501271 OR4L1Q8NH43 312 aa9.84□□□□□ -0.83
CLIP1-204ENST00000501271 PIP4K2CQ8TBX8 421 aa9.84□□□□□ -0.83
CLIP1-204ENST00000501271 SLCO4A1Q96BD0 722 aa9.84□□□□□ -0.83
CLIP1-204ENST00000501271 SMIM14Q96QK8 99 aa9.84□□□□□ -0.83
CLIP1-204ENST00000501271 TRIB3Q96RU7 358 aa9.84□□□□□ -0.83
CLIP1-204ENST00000501271 AARSD1Q9BTE6 412 aaKnown RBP9.84□□□□□ -0.83
CLIP1-204ENST00000501271 TRIM4Q9C037 500 aa9.84□□□□□ -0.83
CLIP1-204ENST00000501271 SEMA6AQ9H2E6 1030 aa9.84□□□□□ -0.83
CLIP1-204ENST00000501271 Q9H521 79 aa9.84□□□□□ -0.83
CLIP1-204ENST00000501271 MID1IP1Q9NPA3 183 aa9.84□□□□□ -0.83
CLIP1-204ENST00000501271 TMEM181Q9P2C4 612 aa9.84□□□□□ -0.83
CLIP1-204ENST00000501271 IKZF3Q9UKT9 509 aa9.84□□□□□ -0.83
CLIP1-204ENST00000501271 SPO11Q9Y5K1 396 aa9.84□□□□□ -0.83
CLIP1-204ENST00000501271 MYOCOSA0A1B0GUC4 107 aa9.84□□□□□ -0.83
CLIP1-204ENST00000501271 OR6C75A6NL08 312 aa9.84□□□□□ -0.83
CLIP1-204ENST00000501271 PIP5K1BO14986 540 aa9.84□□□□□ -0.83
CLIP1-204ENST00000501271 CA12O43570 354 aa9.84□□□□□ -0.83
CLIP1-204ENST00000501271 CSPG5O95196 566 aa9.84□□□□□ -0.83
CLIP1-204ENST00000501271 EPOP01588 193 aa9.84□□□□□ -0.83
CLIP1-204ENST00000501271 SERPINF2P08697 491 aa9.84□□□□□ -0.83
CLIP1-204ENST00000501271 ETS2P15036 469 aa9.84□□□□□ -0.83
CLIP1-204ENST00000501271 OGNP20774 298 aaKnown RBP9.84□□□□□ -0.83
CLIP1-204ENST00000501271 RGRP47804 291 aa9.84□□□□□ -0.83
CLIP1-204ENST00000501271 ACADVLP49748 655 aa9.84□□□□□ -0.83
CLIP1-204ENST00000501271 SLC7A2P52569 658 aa9.84□□□□□ -0.83
CLIP1-204ENST00000501271 ACLYP53396 1101 aa9.84□□□□□ -0.83
CLIP1-204ENST00000501271 MYBPC1Q00872 1141 aa9.84□□□□□ -0.83
CLIP1-204ENST00000501271 RHDQ02161 417 aa9.84□□□□□ -0.83
CLIP1-204ENST00000501271 GRB7Q14451 532 aa9.84□□□□□ -0.83
CLIP1-204ENST00000501271 SETMARQ53H47 684 aaPredicted RBP9.84□□□□□ -0.83
CLIP1-204ENST00000501271 FBXO48Q5FWF7 155 aa9.84□□□□□ -0.83
CLIP1-204ENST00000501271 PITRM1Q5JRX3 1037 aa9.84□□□□□ -0.83
CLIP1-204ENST00000501271 ALG1LQ6GMV1 187 aa9.84□□□□□ -0.83
CLIP1-204ENST00000501271 PHYKPLQ8IUZ5 450 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms