RNA–Protein interactions for RNA: ENST00000498810.1

CDK11A-222, Transcript of cyclin dependent kinase 11A, human

TSL 2

Gene CDK11A, Length 574 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK11A-222	ENST00000498810	CCNB1	P14635	433 aa		10.69	□□□□□ -0.7
CDK11A-222	ENST00000498810	JUP	P14923	745 aa		10.69	□□□□□ -0.7
CDK11A-222	ENST00000498810	COMT	P21964	271 aa		10.69	□□□□□ -0.7
CDK11A-222	ENST00000498810	KEL	P23276	732 aa		10.69	□□□□□ -0.7
CDK11A-222	ENST00000498810	CCNC	P24863	283 aa		10.69	□□□□□ -0.7
CDK11A-222	ENST00000498810	VIPR1	P32241	457 aa		10.69	□□□□□ -0.7
CDK11A-222	ENST00000498810	ACADVL	P49748	655 aa		10.69	□□□□□ -0.7
CDK11A-222	ENST00000498810	PFN3	P60673	137 aa		10.69	□□□□□ -0.7
CDK11A-222	ENST00000498810	GBE1	Q04446	702 aa		10.69	□□□□□ -0.7
CDK11A-222	ENST00000498810	TRAF2	Q12933	501 aa		10.69	□□□□□ -0.7
CDK11A-222	ENST00000498810	ZNF211	Q13398	564 aa	Predicted RBP	10.69	□□□□□ -0.7
CDK11A-222	ENST00000498810	MTM1	Q13496	603 aa		10.69	□□□□□ -0.7
CDK11A-222	ENST00000498810	TFDP2	Q14188	446 aa		10.69	□□□□□ -0.7
CDK11A-222	ENST00000498810	NFATC4	Q14934	902 aa		10.69	□□□□□ -0.7
CDK11A-222	ENST00000498810	PDK1	Q15118	436 aa		10.69	□□□□□ -0.7
CDK11A-222	ENST00000498810	DEFB133	Q30KQ1	61 aa		10.69	□□□□□ -0.7
CDK11A-222	ENST00000498810	KAZN	Q674X7	775 aa		10.69	□□□□□ -0.7
CDK11A-222	ENST00000498810	ENPP7	Q6UWV6	458 aa		10.69	□□□□□ -0.7
CDK11A-222	ENST00000498810	KDM7A	Q6ZMT4	941 aa		10.69	□□□□□ -0.7
CDK11A-222	ENST00000498810	DAAM2	Q86T65	1068 aa		10.69	□□□□□ -0.7
CDK11A-222	ENST00000498810	ZSWIM9	Q86XI8	627 aa		10.69	□□□□□ -0.7
CDK11A-222	ENST00000498810	RBFA	Q8N0V3	343 aa		10.69	□□□□□ -0.7
CDK11A-222	ENST00000498810	TXLNB	Q8N3L3	684 aa		10.69	□□□□□ -0.7
CDK11A-222	ENST00000498810	PGBD5	Q8N414	524 aa		10.69	□□□□□ -0.7
CDK11A-222	ENST00000498810	BEND7	Q8N7W2	519 aa	Predicted RBP	10.69	□□□□□ -0.7
CDK11A-222	ENST00000498810	TP53I13	Q8NBR0	393 aa	Predicted RBP	10.69	□□□□□ -0.7
CDK11A-222	ENST00000498810	FAM71B	Q8TC56	605 aa		10.69	□□□□□ -0.7
CDK11A-222	ENST00000498810	ZDHHC1	Q8WTX9	485 aa		10.69	□□□□□ -0.7
CDK11A-222	ENST00000498810	SCG3	Q8WXD2	468 aa	Known RBP	10.69	□□□□□ -0.7
CDK11A-222	ENST00000498810	RAPGEF5	Q92565	580 aa		10.69	□□□□□ -0.7
CDK11A-222	ENST00000498810	CENPT	Q96BT3	561 aa		10.69	□□□□□ -0.7
CDK11A-222	ENST00000498810	HDAC11	Q96DB2	347 aa		10.69	□□□□□ -0.7
CDK11A-222	ENST00000498810	ECHDC3	Q96DC8	303 aa		10.69	□□□□□ -0.7
CDK11A-222	ENST00000498810	WDR92	Q96MX6	357 aa		10.69	□□□□□ -0.7
CDK11A-222	ENST00000498810	RNF157	Q96PX1	679 aa		10.69	□□□□□ -0.7
CDK11A-222	ENST00000498810	PANX2	Q96RD6	677 aa		10.69	□□□□□ -0.7
CDK11A-222	ENST00000498810	KLF6	Q99612	283 aa	Predicted RBP	10.69	□□□□□ -0.7
CDK11A-222	ENST00000498810	ABCG4	Q9H172	646 aa		10.69	□□□□□ -0.7
CDK11A-222	ENST00000498810	WDR26	Q9H7D7	661 aa		10.69	□□□□□ -0.7
CDK11A-222	ENST00000498810	SUDS3	Q9H7L9	328 aa	Predicted RBP	10.69	□□□□□ -0.7
CDK11A-222	ENST00000498810	MBNL1	Q9NR56	388 aa	Known RBP	10.69	□□□□□ -0.7
CDK11A-222	ENST00000498810	NCKIPSD	Q9NZQ3	722 aa		10.69	□□□□□ -0.7
CDK11A-222	ENST00000498810	OR1A2	Q9Y585	309 aa		10.69	□□□□□ -0.7
CDK11A-222	ENST00000498810	PCDHGA1	Q9Y5H4	931 aa		10.69	□□□□□ -0.7
CDK11A-222	ENST00000498810	PCDHA13	Q9Y5I0	950 aa		10.69	□□□□□ -0.7
CDK11A-222	ENST00000498810	RAI2	Q9Y5P3	530 aa		10.69	□□□□□ -0.7
CDK11A-222	ENST00000498810	ACACB	O00763	2458 aa		10.69	□□□□□ -0.7
CDK11A-222	ENST00000498810	MAP1B	P46821	2468 aa	Known RBP	10.69	□□□□□ -0.7
CDK11A-222	ENST00000498810	CHD8	Q9HCK8	2581 aa		10.68	□□□□□ -0.7
CDK11A-222	ENST00000498810	FAM149A	A5PLN7	773 aa		10.68	□□□□□ -0.7
CDK11A-222	ENST00000498810	SOWAHD	A6NJG2	315 aa		10.68	□□□□□ -0.7
CDK11A-222	ENST00000498810	SHISA8	B8ZZ34	492 aa		10.68	□□□□□ -0.7
CDK11A-222	ENST00000498810	TRAFD1	O14545	582 aa	Predicted RBP	10.68	□□□□□ -0.7
CDK11A-222	ENST00000498810	SCAMP1	O15126	338 aa		10.68	□□□□□ -0.7
CDK11A-222	ENST00000498810	PGLS	O95336	258 aa		10.68	□□□□□ -0.7
CDK11A-222	ENST00000498810	C1S	P09871	688 aa		10.68	□□□□□ -0.7
CDK11A-222	ENST00000498810	ALPI	P09923	528 aa		10.68	□□□□□ -0.7
CDK11A-222	ENST00000498810	BMP4	P12644	408 aa		10.68	□□□□□ -0.7
CDK11A-222	ENST00000498810	CTPS1	P17812	591 aa		10.68	□□□□□ -0.7
CDK11A-222	ENST00000498810	CES1	P23141	567 aa		10.68	□□□□□ -0.7
CDK11A-222	ENST00000498810	IL4R	P24394	825 aa		10.68	□□□□□ -0.7
CDK11A-222	ENST00000498810	ARSE	P51690	589 aa		10.68	□□□□□ -0.7
CDK11A-222	ENST00000498810	DSC2	Q02487	901 aa		10.68	□□□□□ -0.7
CDK11A-222	ENST00000498810	ILK	Q13418	452 aa		10.68	□□□□□ -0.7
CDK11A-222	ENST00000498810	INPP5A	Q14642	412 aa		10.68	□□□□□ -0.7
CDK11A-222	ENST00000498810	ELOC	Q15369	112 aa		10.68	□□□□□ -0.7
CDK11A-222	ENST00000498810	WSCD2	Q2TBF2	565 aa		10.68	□□□□□ -0.7
CDK11A-222	ENST00000498810	HES3	Q5TGS1	186 aa		10.68	□□□□□ -0.7
CDK11A-222	ENST00000498810	LRRC38	Q5VT99	294 aa		10.68	□□□□□ -0.7
CDK11A-222	ENST00000498810	RAET1G	Q6H3X3	334 aa		10.68	□□□□□ -0.7
CDK11A-222	ENST00000498810	ESRP1	Q6NXG1	681 aa	Known RBP	10.68	□□□□□ -0.7
CDK11A-222	ENST00000498810	ZCCHC8	Q6NZY4	707 aa	Known RBP	10.68	□□□□□ -0.7
CDK11A-222	ENST00000498810	LIPI	Q6XZB0	460 aa		10.68	□□□□□ -0.7
CDK11A-222	ENST00000498810	BZW1	Q7L1Q6	419 aa	Known RBP	10.68	□□□□□ -0.7
CDK11A-222	ENST00000498810	TMTC1	Q8IUR5	882 aa		10.68	□□□□□ -0.7
CDK11A-222	ENST00000498810	LPCAT1	Q8NF37	534 aa		10.68	□□□□□ -0.7
CDK11A-222	ENST00000498810	FAF2	Q96CS3	445 aa		10.68	□□□□□ -0.7
CDK11A-222	ENST00000498810	RBM41	Q96IZ5	413 aa	Known RBP	10.68	□□□□□ -0.7
CDK11A-222	ENST00000498810	APOO	Q9BUR5	198 aa		10.68	□□□□□ -0.7
CDK11A-222	ENST00000498810	KCTD5	Q9NXV2	234 aa		10.68	□□□□□ -0.7
CDK11A-222	ENST00000498810	DTL	Q9NZJ0	730 aa		10.68	□□□□□ -0.7
CDK11A-222	ENST00000498810	AMACR	Q9UHK6	382 aa		10.68	□□□□□ -0.7
CDK11A-222	ENST00000498810	DNPEP	Q9ULA0	475 aa		10.68	□□□□□ -0.7
CDK11A-222	ENST00000498810	ARID1B	Q8NFD5	2236 aa	Predicted RBP	10.68	□□□□□ -0.7
CDK11A-222	ENST00000498810	ZFC3H1	O60293	1989 aa	Known RBP	10.67	□□□□□ -0.7
CDK11A-222	ENST00000498810	CPED1	A4D0V7	1026 aa		10.67	□□□□□ -0.7
CDK11A-222	ENST00000498810	CFAP69	A5D8W1	941 aa		10.67	□□□□□ -0.7
CDK11A-222	ENST00000498810	ZNF487	B1APH4	448 aa		10.67	□□□□□ -0.7
CDK11A-222	ENST00000498810		K7ESM1	405 aa		10.67	□□□□□ -0.7
CDK11A-222	ENST00000498810	KCNK1	O00180	336 aa		10.67	□□□□□ -0.7
CDK11A-222	ENST00000498810	PDE2A	O00408	941 aa	Predicted RBP	10.67	□□□□□ -0.7
CDK11A-222	ENST00000498810	TRIM38	O00635	465 aa		10.67	□□□□□ -0.7
CDK11A-222	ENST00000498810	ATXN7	O15265	892 aa	Predicted RBP	10.67	□□□□□ -0.7
CDK11A-222	ENST00000498810	NDUFA10	O95299	355 aa		10.67	□□□□□ -0.7
CDK11A-222	ENST00000498810	PEX11B	O96011	259 aa		10.67	□□□□□ -0.7
CDK11A-222	ENST00000498810	TNF	P01375	233 aa		10.67	□□□□□ -0.7
CDK11A-222	ENST00000498810	JCHAIN	P01591	159 aa		10.67	□□□□□ -0.7
CDK11A-222	ENST00000498810	SLC4A1	P02730	911 aa		10.67	□□□□□ -0.7
CDK11A-222	ENST00000498810	HLA-DQB2	P05538	268 aa		10.67	□□□□□ -0.7
CDK11A-222	ENST00000498810	CTNNA2	P26232	953 aa		10.67	□□□□□ -0.7

Retrieved 100 of 20,778 RNA–protein pairs in 24 ms