RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 ANKRD62A6NC57 917 aa14.67□□□□□ -0.06
TRAF4-212ENST00000498540 EFCAB7A8K855 629 aa14.67□□□□□ -0.06
TRAF4-212ENST00000498540 DFFAO00273 331 aa14.67□□□□□ -0.06
TRAF4-212ENST00000498540 EEF2KO00418 725 aaKnown RBP14.67□□□□□ -0.06
TRAF4-212ENST00000498540 NKX2-8O15522 239 aa14.67□□□□□ -0.06
TRAF4-212ENST00000498540 ZW10O43264 779 aa14.67□□□□□ -0.06
TRAF4-212ENST00000498540 HEXIM1O94992 359 aaKnown RBP14.67□□□□□ -0.06
TRAF4-212ENST00000498540 NTRK1P04629 796 aa14.67□□□□□ -0.06
TRAF4-212ENST00000498540 PRKAR1AP10644 381 aa14.67□□□□□ -0.06
TRAF4-212ENST00000498540 GP1BBP13224 206 aa14.67□□□□□ -0.06
TRAF4-212ENST00000498540 CR2P20023 1033 aa14.67□□□□□ -0.06
TRAF4-212ENST00000498540 LHCGRP22888 699 aa14.67□□□□□ -0.06
TRAF4-212ENST00000498540 EEF1GP26641 437 aaKnown RBP14.67□□□□□ -0.06
TRAF4-212ENST00000498540 ADCY8P40145 1251 aa14.67□□□□□ -0.06
TRAF4-212ENST00000498540 ETV3P41162 512 aa14.67□□□□□ -0.06
TRAF4-212ENST00000498540 AP1S1P61966 158 aa14.67□□□□□ -0.06
TRAF4-212ENST00000498540 NSUN2Q08J23 767 aaKnown RBP eCLIP14.67□□□□□ -0.06
TRAF4-212ENST00000498540 HSD11B1LQ7Z5J1 315 aa14.67□□□□□ -0.06
TRAF4-212ENST00000498540 ZNF761Q86XN6 746 aaPredicted RBP14.67□□□□□ -0.06
TRAF4-212ENST00000498540 TP53INP2Q8IXH6 220 aa14.67□□□□□ -0.06
TRAF4-212ENST00000498540 BMPERQ8N8U9 685 aa14.67□□□□□ -0.06
TRAF4-212ENST00000498540 C9orf43Q8TAL5 461 aaPredicted RBP14.67□□□□□ -0.06
TRAF4-212ENST00000498540 DTD2Q96FN9 168 aa14.67□□□□□ -0.06
TRAF4-212ENST00000498540 SLC45A3Q96JT2 553 aa14.67□□□□□ -0.06
TRAF4-212ENST00000498540 CATSPER2Q96P56 530 aa14.67□□□□□ -0.06
TRAF4-212ENST00000498540 ASPSCR1Q9BZE9 553 aa14.67□□□□□ -0.06
TRAF4-212ENST00000498540 DHX35Q9H5Z1 703 aaKnown RBP14.67□□□□□ -0.06
TRAF4-212ENST00000498540 SEPT11Q9NVA2 429 aaKnown RBP14.67□□□□□ -0.06
TRAF4-212ENST00000498540 KCNK4Q9NYG8 393 aa14.67□□□□□ -0.06
TRAF4-212ENST00000498540 DONSONQ9NYP3 566 aa14.67□□□□□ -0.06
TRAF4-212ENST00000498540 ANAPC2Q9UJX6 822 aa14.67□□□□□ -0.06
TRAF4-212ENST00000498540 PILRAQ9UKJ1 303 aa14.67□□□□□ -0.06
TRAF4-212ENST00000498540 SLC17A4Q9Y2C5 497 aa14.67□□□□□ -0.06
TRAF4-212ENST00000498540 GOLGA6CA6NDK9 693 aa14.66□□□□□ -0.06
TRAF4-212ENST00000498540 GOLGA6BA6NDN3 693 aa14.66□□□□□ -0.06
TRAF4-212ENST00000498540 B4E171 279 aa14.66□□□□□ -0.06
TRAF4-212ENST00000498540 GOLGA6DP0CG33 693 aa14.66□□□□□ -0.06
TRAF4-212ENST00000498540 VIPR1P32241 457 aa14.66□□□□□ -0.06
TRAF4-212ENST00000498540 TSPAN7P41732 249 aa14.66□□□□□ -0.06
TRAF4-212ENST00000498540 ACTR1BP42025 376 aa14.66□□□□□ -0.06
TRAF4-212ENST00000498540 ACTR1AP61163 376 aa14.66□□□□□ -0.06
TRAF4-212ENST00000498540 IL10RBQ08334 325 aa14.66□□□□□ -0.06
TRAF4-212ENST00000498540 CDC20Q12834 499 aa14.66□□□□□ -0.06
TRAF4-212ENST00000498540 SQSTM1Q13501 440 aa14.66□□□□□ -0.06
TRAF4-212ENST00000498540 RFTN1Q14699 578 aaPredicted RBP14.66□□□□□ -0.06
TRAF4-212ENST00000498540 PTPRRQ15256 657 aa14.66□□□□□ -0.06
TRAF4-212ENST00000498540 DCAF12Q5T6F0 453 aa14.66□□□□□ -0.06
TRAF4-212ENST00000498540 RAET1GQ6H3X3 334 aa14.66□□□□□ -0.06
TRAF4-212ENST00000498540 DOK6Q6PKX4 331 aa14.66□□□□□ -0.06
TRAF4-212ENST00000498540 NRSN1Q8IZ57 195 aa14.66□□□□□ -0.06
TRAF4-212ENST00000498540 PDCD6IPQ8WUM4 868 aaKnown RBP14.66□□□□□ -0.06
TRAF4-212ENST00000498540 SPOCK2Q92563 424 aa14.66□□□□□ -0.06
TRAF4-212ENST00000498540 PSKH2Q96QS6 385 aa14.66□□□□□ -0.06
TRAF4-212ENST00000498540 PEBP4Q96S96 227 aa14.66□□□□□ -0.06
TRAF4-212ENST00000498540 KCTD15Q96SI1 283 aaPredicted RBP14.66□□□□□ -0.06
TRAF4-212ENST00000498540 ZMYND15Q9H091 742 aa14.66□□□□□ -0.06
TRAF4-212ENST00000498540 CLSTN2Q9H4D0 955 aa14.66□□□□□ -0.06
TRAF4-212ENST00000498540 GPN2Q9H9Y4 310 aaPredicted RBP14.66□□□□□ -0.06
TRAF4-212ENST00000498540 GOLGA6AQ9NYA3 693 aa14.66□□□□□ -0.06
TRAF4-212ENST00000498540 SIK3Q9Y2K2 1263 aa14.66□□□□□ -0.06
TRAF4-212ENST00000498540 PCDHGC4Q9Y5F7 938 aa14.66□□□□□ -0.06
TRAF4-212ENST00000498540 USP9XQ93008 2570 aaPredicted RBP14.66□□□□□ -0.06
TRAF4-212ENST00000498540 LOC101059948A0A1B0GTJ6 334 aa14.65□□□□□ -0.06
TRAF4-212ENST00000498540 NPIPB15A6NHN6 443 aaPredicted RBP14.65□□□□□ -0.06
TRAF4-212ENST00000498540 HTRA2O43464 458 aaPredicted RBP14.65□□□□□ -0.06
TRAF4-212ENST00000498540 CPP00450 1065 aa14.65□□□□□ -0.06
TRAF4-212ENST00000498540 IVLP07476 585 aa14.65□□□□□ -0.06
TRAF4-212ENST00000498540 ERCC2P18074 760 aa14.65□□□□□ -0.06
TRAF4-212ENST00000498540 OAS2P29728 719 aaKnown RBP14.65□□□□□ -0.06
TRAF4-212ENST00000498540 RAB15P59190 212 aa14.65□□□□□ -0.06
TRAF4-212ENST00000498540 SLC10A7Q0GE19 358 aa14.65□□□□□ -0.06
TRAF4-212ENST00000498540 LBRQ14739 615 aaKnown RBP14.65□□□□□ -0.06
TRAF4-212ENST00000498540 KRT31Q15323 416 aa14.65□□□□□ -0.06
TRAF4-212ENST00000498540 TMEM71Q6P5X7 295 aa14.65□□□□□ -0.06
TRAF4-212ENST00000498540 DCUN1D2Q6PH85 259 aa14.65□□□□□ -0.06
TRAF4-212ENST00000498540 RFX8Q6ZV50 586 aa14.65□□□□□ -0.06
TRAF4-212ENST00000498540 Q6ZVL8 140 aa14.65□□□□□ -0.06
TRAF4-212ENST00000498540 TSPAN33Q86UF1 283 aa14.65□□□□□ -0.06
TRAF4-212ENST00000498540 UNC5BQ8IZJ1 945 aa14.65□□□□□ -0.06
TRAF4-212ENST00000498540 CBARPQ8N350 705 aaPredicted RBP14.65□□□□□ -0.06
TRAF4-212ENST00000498540 FNIP1Q8TF40 1166 aa14.65□□□□□ -0.06
TRAF4-212ENST00000498540 RTP4Q96DX8 246 aa14.65□□□□□ -0.06
TRAF4-212ENST00000498540 CTRCQ99895 268 aa14.65□□□□□ -0.06
TRAF4-212ENST00000498540 DPYSL5Q9BPU6 564 aa14.65□□□□□ -0.06
TRAF4-212ENST00000498540 SNRNP25Q9BV90 132 aaKnown RBP14.65□□□□□ -0.06
TRAF4-212ENST00000498540 SPRY4Q9C004 299 aa14.65□□□□□ -0.06
TRAF4-212ENST00000498540 DACH1Q9UI36 760 aa14.65□□□□□ -0.06
TRAF4-212ENST00000498540 PLAAQ9Y263 795 aa14.65□□□□□ -0.06
TRAF4-212ENST00000498540 MAN2B2Q9Y2E5 1009 aa14.65□□□□□ -0.06
TRAF4-212ENST00000498540 SPENQ96T58 3664 aaKnown RBP14.65□□□□□ -0.06
TRAF4-212ENST00000498540 TRBV23OR9-2A0A075B6M9 112 aa14.64□□□□□ -0.07
TRAF4-212ENST00000498540 A0A0U1RQS6 177 aa14.64□□□□□ -0.07
TRAF4-212ENST00000498540 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.64□□□□□ -0.07
TRAF4-212ENST00000498540 CAPN5O15484 640 aaPredicted RBP14.64□□□□□ -0.07
TRAF4-212ENST00000498540 DAPK3O43293 454 aa14.64□□□□□ -0.07
TRAF4-212ENST00000498540 SOCS5O75159 536 aa14.64□□□□□ -0.07
TRAF4-212ENST00000498540 SOD1P00441 154 aa14.64□□□□□ -0.07
TRAF4-212ENST00000498540 TNFAIP3P21580 790 aa14.64□□□□□ -0.07
TRAF4-212ENST00000498540 GPLD1P80108 840 aa14.64□□□□□ -0.07
TRAF4-212ENST00000498540 TRAF2Q12933 501 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms