RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 DHX35Q9H5Z1 703 aaKnown RBP16.04■□□□□ 0.16
MUC1-220ENST00000498431 SP110Q9HB58 689 aa16.04■□□□□ 0.16
MUC1-220ENST00000498431 LMBRD1Q9NUN5 540 aa16.04■□□□□ 0.16
MUC1-220ENST00000498431 SLC39A1Q9NY26 324 aa16.04■□□□□ 0.16
MUC1-220ENST00000498431 PCDHGC4Q9Y5F7 938 aa16.04■□□□□ 0.16
MUC1-220ENST00000498431 USP9YO00507 2555 aaPredicted RBP16.03■□□□□ 0.16
MUC1-220ENST00000498431 A0A0U1RQS6 177 aa16.03■□□□□ 0.16
MUC1-220ENST00000498431 ANKRD62A6NC57 917 aa16.03■□□□□ 0.16
MUC1-220ENST00000498431 DUX1O43812 170 aa16.03■□□□□ 0.16
MUC1-220ENST00000498431 RAD1O60671 282 aa16.03■□□□□ 0.16
MUC1-220ENST00000498431 HEXIM1O94992 359 aaKnown RBP16.03■□□□□ 0.16
MUC1-220ENST00000498431 ERCC2P18074 760 aa16.03■□□□□ 0.16
MUC1-220ENST00000498431 LHCGRP22888 699 aa16.03■□□□□ 0.16
MUC1-220ENST00000498431 CSTF2P33240 577 aaKnown RBP eCLIP16.03■□□□□ 0.16
MUC1-220ENST00000498431 ADCY8P40145 1251 aa16.03■□□□□ 0.16
MUC1-220ENST00000498431 AP1S1P61966 158 aa16.03■□□□□ 0.16
MUC1-220ENST00000498431 SLC10A7Q0GE19 358 aa16.03■□□□□ 0.16
MUC1-220ENST00000498431 TRA2AQ13595 282 aaKnown RBP eCLIP16.03■□□□□ 0.16
MUC1-220ENST00000498431 UBAP2LQ14157 1087 aaKnown RBP16.03■□□□□ 0.16
MUC1-220ENST00000498431 CDKAL1Q5VV42 579 aa16.03■□□□□ 0.16
MUC1-220ENST00000498431 DCUN1D2Q6PH85 259 aa16.03■□□□□ 0.16
MUC1-220ENST00000498431 RFX8Q6ZV50 586 aa16.03■□□□□ 0.16
MUC1-220ENST00000498431 ZNF761Q86XN6 746 aaPredicted RBP16.03■□□□□ 0.16
MUC1-220ENST00000498431 CBARPQ8N350 705 aaPredicted RBP16.03■□□□□ 0.16
MUC1-220ENST00000498431 DTD2Q96FN9 168 aa16.03■□□□□ 0.16
MUC1-220ENST00000498431 AGPAT1Q99943 283 aa16.03■□□□□ 0.16
MUC1-220ENST00000498431 SNRNP25Q9BV90 132 aaKnown RBP16.03■□□□□ 0.16
MUC1-220ENST00000498431 DDA1Q9BW61 102 aa16.03■□□□□ 0.16
MUC1-220ENST00000498431 DONSONQ9NYP3 566 aa16.03■□□□□ 0.16
MUC1-220ENST00000498431 PCSK1NQ9UHG2 260 aa16.03■□□□□ 0.16
MUC1-220ENST00000498431 DACH1Q9UI36 760 aa16.03■□□□□ 0.16
MUC1-220ENST00000498431 GOLGA6CA6NDK9 693 aa16.02■□□□□ 0.16
MUC1-220ENST00000498431 GOLGA6BA6NDN3 693 aa16.02■□□□□ 0.16
MUC1-220ENST00000498431 EFCAB7A8K855 629 aa16.02■□□□□ 0.16
MUC1-220ENST00000498431 NKX2-8O15522 239 aa16.02■□□□□ 0.16
MUC1-220ENST00000498431 HTRA2O43464 458 aaPredicted RBP16.02■□□□□ 0.16
MUC1-220ENST00000498431 GOLGA6DP0CG33 693 aa16.02■□□□□ 0.16
MUC1-220ENST00000498431 TNFAIP3P21580 790 aa16.02■□□□□ 0.16
MUC1-220ENST00000498431 VIPR1P32241 457 aa16.02■□□□□ 0.16
MUC1-220ENST00000498431 ACTR1BP42025 376 aa16.02■□□□□ 0.16
MUC1-220ENST00000498431 ACTR1AP61163 376 aa16.02■□□□□ 0.16
MUC1-220ENST00000498431 FOXK1P85037 733 aa16.02■□□□□ 0.16
MUC1-220ENST00000498431 IL10RBQ08334 325 aa16.02■□□□□ 0.16
MUC1-220ENST00000498431 BIRC2Q13490 618 aa16.02■□□□□ 0.16
MUC1-220ENST00000498431 SQSTM1Q13501 440 aa16.02■□□□□ 0.16
MUC1-220ENST00000498431 RFTN1Q14699 578 aaPredicted RBP16.02■□□□□ 0.16
MUC1-220ENST00000498431 SYCP1Q15431 976 aa16.02■□□□□ 0.16
MUC1-220ENST00000498431 ANKS6Q68DC2 871 aa16.02■□□□□ 0.16
MUC1-220ENST00000498431 DOK6Q6PKX4 331 aa16.02■□□□□ 0.16
MUC1-220ENST00000498431 RFLNAQ6ZTI6 216 aa16.02■□□□□ 0.16
MUC1-220ENST00000498431 Q6ZVL8 140 aa16.02■□□□□ 0.16
MUC1-220ENST00000498431 CYP4V2Q6ZWL3 525 aaPredicted RBP16.02■□□□□ 0.16
MUC1-220ENST00000498431 TSPAN33Q86UF1 283 aa16.02■□□□□ 0.16
MUC1-220ENST00000498431 FAM129CQ86XR2 697 aa16.02■□□□□ 0.16
MUC1-220ENST00000498431 MCOLN2Q8IZK6 566 aa16.02■□□□□ 0.16
MUC1-220ENST00000498431 PGBD5Q8N414 524 aa16.02■□□□□ 0.16
MUC1-220ENST00000498431 BMPERQ8N8U9 685 aa16.02■□□□□ 0.16
MUC1-220ENST00000498431 PDCD6IPQ8WUM4 868 aaKnown RBP16.02■□□□□ 0.16
MUC1-220ENST00000498431 SPOCK2Q92563 424 aa16.02■□□□□ 0.16
MUC1-220ENST00000498431 PSKH2Q96QS6 385 aa16.02■□□□□ 0.16
MUC1-220ENST00000498431 ZNF71Q9NQZ8 489 aaPredicted RBP16.02■□□□□ 0.16
MUC1-220ENST00000498431 GOLGA6AQ9NYA3 693 aa16.02■□□□□ 0.16
MUC1-220ENST00000498431 KCNK4Q9NYG8 393 aa16.02■□□□□ 0.16
MUC1-220ENST00000498431 TAS2R14Q9NYV8 317 aa16.02■□□□□ 0.16
MUC1-220ENST00000498431 SEPT3Q9UH03 358 aa16.02■□□□□ 0.16
MUC1-220ENST00000498431 TUBD1Q9UJT1 453 aa16.02■□□□□ 0.16
MUC1-220ENST00000498431 PILRAQ9UKJ1 303 aa16.02■□□□□ 0.16
MUC1-220ENST00000498431 SLC17A4Q9Y2C5 497 aa16.02■□□□□ 0.16
MUC1-220ENST00000498431 USP9XQ93008 2570 aaPredicted RBP16.01■□□□□ 0.15
MUC1-220ENST00000498431 TRBV23OR9-2A0A075B6M9 112 aa16.01■□□□□ 0.15
MUC1-220ENST00000498431 CLEC18AA5D8T8 446 aa16.01■□□□□ 0.15
MUC1-220ENST00000498431 NPIPB15A6NHN6 443 aaPredicted RBP16.01■□□□□ 0.15
MUC1-220ENST00000498431 ZNF891A8MT65 544 aaPredicted RBP16.01■□□□□ 0.15
MUC1-220ENST00000498431 DAPK3O43293 454 aa16.01■□□□□ 0.15
MUC1-220ENST00000498431 ATMINO43313 823 aaPredicted RBP16.01■□□□□ 0.15
MUC1-220ENST00000498431 SOD1P00441 154 aa16.01■□□□□ 0.15
MUC1-220ENST00000498431 CPP00450 1065 aa16.01■□□□□ 0.15
MUC1-220ENST00000498431 IVLP07476 585 aa16.01■□□□□ 0.15
MUC1-220ENST00000498431 PRKAR1AP10644 381 aa16.01■□□□□ 0.15
MUC1-220ENST00000498431 CR2P20023 1033 aa16.01■□□□□ 0.15
MUC1-220ENST00000498431 CASRP41180 1078 aa16.01■□□□□ 0.15
MUC1-220ENST00000498431 CCR10P46092 362 aa16.01■□□□□ 0.15
MUC1-220ENST00000498431 TRAF2Q12933 501 aa16.01■□□□□ 0.15
MUC1-220ENST00000498431 LBRQ14739 615 aaKnown RBP16.01■□□□□ 0.15
MUC1-220ENST00000498431 PPP6R3Q5H9R7 873 aaPredicted RBP16.01■□□□□ 0.15
MUC1-220ENST00000498431 ERMARDQ5T6L9 678 aa16.01■□□□□ 0.15
MUC1-220ENST00000498431 RAET1GQ6H3X3 334 aa16.01■□□□□ 0.15
MUC1-220ENST00000498431 CLEC18BQ6UXF7 455 aa16.01■□□□□ 0.15
MUC1-220ENST00000498431 TRIM74Q86UV6 250 aa16.01■□□□□ 0.15
MUC1-220ENST00000498431 UNC5BQ8IZJ1 945 aa16.01■□□□□ 0.15
MUC1-220ENST00000498431 CLEC18CQ8NCF0 446 aa16.01■□□□□ 0.15
MUC1-220ENST00000498431 CCDC112Q8NEF3 446 aa16.01■□□□□ 0.15
MUC1-220ENST00000498431 FNIP1Q8TF40 1166 aa16.01■□□□□ 0.15
MUC1-220ENST00000498431 SLC45A3Q96JT2 553 aa16.01■□□□□ 0.15
MUC1-220ENST00000498431 CTRCQ99895 268 aa16.01■□□□□ 0.15
MUC1-220ENST00000498431 SPRY4Q9C004 299 aa16.01■□□□□ 0.15
MUC1-220ENST00000498431 TRIM7Q9C029 511 aa16.01■□□□□ 0.15
MUC1-220ENST00000498431 TMEM98Q9Y2Y6 226 aa16.01■□□□□ 0.15
MUC1-220ENST00000498431 LOC101059948A0A1B0GTJ6 334 aa16■□□□□ 0.15
MUC1-220ENST00000498431 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms