RNA–Protein interactions for RNA: ENST00000498160.5

CTDSP1-215, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-215ENST00000498160 SPAG6O75602 509 aa17.54■□□□□ 0.4
CTDSP1-215ENST00000498160 RECQL5O94762 991 aaPredicted RBP17.54■□□□□ 0.4
CTDSP1-215ENST00000498160 USP1O94782 785 aa17.54■□□□□ 0.4
CTDSP1-215ENST00000498160 PIRTP0C851 137 aa17.54■□□□□ 0.4
CTDSP1-215ENST00000498160 TSHRP16473 764 aa17.54■□□□□ 0.4
CTDSP1-215ENST00000498160 HNRNPA2B1P22626 353 aaKnown RBP17.54■□□□□ 0.4
CTDSP1-215ENST00000498160 AKT2P31751 481 aa17.54■□□□□ 0.4
CTDSP1-215ENST00000498160 SPAM1P38567 509 aa17.54■□□□□ 0.4
CTDSP1-215ENST00000498160 DPTQ07507 201 aa17.54■□□□□ 0.4
CTDSP1-215ENST00000498160 DHX9Q08211 1270 aaKnown RBP17.54■□□□□ 0.4
CTDSP1-215ENST00000498160 DMWDQ09019 674 aa17.54■□□□□ 0.4
CTDSP1-215ENST00000498160 PDIA2Q13087 525 aaKnown RBP17.54■□□□□ 0.4
CTDSP1-215ENST00000498160 ZNF284Q2VY69 593 aa17.54■□□□□ 0.4
CTDSP1-215ENST00000498160 CEP68Q76N32 757 aa17.54■□□□□ 0.4
CTDSP1-215ENST00000498160 TECPR1Q7Z6L1 1165 aa17.54■□□□□ 0.4
CTDSP1-215ENST00000498160 RELL1Q8IUW5 271 aa17.54■□□□□ 0.4
CTDSP1-215ENST00000498160 SIGLEC10Q96LC7 697 aa17.54■□□□□ 0.4
CTDSP1-215ENST00000498160 TTC25Q96NG3 672 aa17.54■□□□□ 0.4
CTDSP1-215ENST00000498160 EBNA1BP2Q99848 306 aaKnown RBP17.54■□□□□ 0.4
CTDSP1-215ENST00000498160 ANKZF1Q9H8Y5 726 aa17.54■□□□□ 0.4
CTDSP1-215ENST00000498160 GGT7Q9UJ14 662 aa17.54■□□□□ 0.4
CTDSP1-215ENST00000498160 ARL5AQ9Y689 179 aa17.54■□□□□ 0.4
CTDSP1-215ENST00000498160 IGLON5A6NGN9 336 aa17.53■□□□□ 0.4
CTDSP1-215ENST00000498160 PRAMEF26H0Y7S4 382 aa17.53■□□□□ 0.4
CTDSP1-215ENST00000498160 DLL1O00548 723 aa17.53■□□□□ 0.4
CTDSP1-215ENST00000498160 FSBPO95073 299 aa17.53■□□□□ 0.4
CTDSP1-215ENST00000498160 C1SP09871 688 aa17.53■□□□□ 0.4
CTDSP1-215ENST00000498160 ACVR1Q04771 509 aa17.53■□□□□ 0.4
CTDSP1-215ENST00000498160 ITGA9Q13797 1035 aa17.53■□□□□ 0.4
CTDSP1-215ENST00000498160 LRRC14Q15048 493 aa17.53■□□□□ 0.4
CTDSP1-215ENST00000498160 MAP9Q49MG5 647 aa17.53■□□□□ 0.4
CTDSP1-215ENST00000498160 SPANXN3Q5MJ09 141 aa17.53■□□□□ 0.4
CTDSP1-215ENST00000498160 FNBP1LQ5T0N5 605 aa17.53■□□□□ 0.4
CTDSP1-215ENST00000498160 ESRP1Q6NXG1 681 aaKnown RBP17.53■□□□□ 0.4
CTDSP1-215ENST00000498160 RABEPKQ7Z6M1 372 aa17.53■□□□□ 0.4
CTDSP1-215ENST00000498160 TMEM135Q86UB9 458 aa17.53■□□□□ 0.4
CTDSP1-215ENST00000498160 LMNTD2Q8IXW0 634 aa17.53■□□□□ 0.4
CTDSP1-215ENST00000498160 PYROXD1Q8WU10 500 aa17.53■□□□□ 0.4
CTDSP1-215ENST00000498160 SCG3Q8WXD2 468 aaKnown RBP17.53■□□□□ 0.4
CTDSP1-215ENST00000498160 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.53■□□□□ 0.43e-8■■■■■ 70.6
CTDSP1-215ENST00000498160 SGSM3Q96HU1 749 aa17.53■□□□□ 0.4
CTDSP1-215ENST00000498160 ZC3H10Q96K80 434 aaKnown RBP17.53■□□□□ 0.4
CTDSP1-215ENST00000498160 ZSCAN5AQ9BUG6 496 aa17.53■□□□□ 0.4
CTDSP1-215ENST00000498160 FAM83DQ9H4H8 585 aa17.53■□□□□ 0.4
CTDSP1-215ENST00000498160 C6orf106Q9H6K1 298 aaPredicted RBP17.53■□□□□ 0.4
CTDSP1-215ENST00000498160 CD93Q9NPY3 652 aa17.53■□□□□ 0.4
CTDSP1-215ENST00000498160 PIH1D1Q9NWS0 290 aaKnown RBP17.53■□□□□ 0.4
CTDSP1-215ENST00000498160 MBD1Q9UIS9 605 aaPredicted RBP17.53■□□□□ 0.4
CTDSP1-215ENST00000498160 ZFR2Q9UPR6 939 aaKnown RBP17.53■□□□□ 0.4
CTDSP1-215ENST00000498160 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.53■□□□□ 0.4
CTDSP1-215ENST00000498160 A0A1W2PPC4 97 aa17.52■□□□□ 0.4
CTDSP1-215ENST00000498160 PRR23AA6NEV1 266 aa17.52■□□□□ 0.4
CTDSP1-215ENST00000498160 A8MX80 341 aa17.52■□□□□ 0.4
CTDSP1-215ENST00000498160 MAGEC1O60732 1142 aa17.52■□□□□ 0.4
CTDSP1-215ENST00000498160 AVILO75366 819 aa17.52■□□□□ 0.4
CTDSP1-215ENST00000498160 SLC4A1P02730 911 aa17.52■□□□□ 0.4
CTDSP1-215ENST00000498160 CD27P26842 260 aa17.52■□□□□ 0.4
CTDSP1-215ENST00000498160 PPARGP37231 505 aaPredicted RBP17.52■□□□□ 0.4
CTDSP1-215ENST00000498160 CARSP49589 748 aaKnown RBP17.52■□□□□ 0.4
CTDSP1-215ENST00000498160 PRAMEP78395 509 aa17.52■□□□□ 0.4
CTDSP1-215ENST00000498160 ILF2Q12905 390 aaKnown RBP17.52■□□□□ 0.4
CTDSP1-215ENST00000498160 MTM1Q13496 603 aa17.52■□□□□ 0.4
CTDSP1-215ENST00000498160 FRG1Q14331 258 aaKnown RBP17.52■□□□□ 0.4
CTDSP1-215ENST00000498160 ERCC6LQ2NKX8 1250 aa17.52■□□□□ 0.4
CTDSP1-215ENST00000498160 PMS2CLQ68D20 193 aa17.52■□□□□ 0.4
CTDSP1-215ENST00000498160 DENND2CQ68D51 928 aa17.52■□□□□ 0.4
CTDSP1-215ENST00000498160 KIAA0930Q6ICG6 404 aaPredicted RBP17.52■□□□□ 0.4
CTDSP1-215ENST00000498160 ZNF449Q6P9G9 518 aa17.52■□□□□ 0.4
CTDSP1-215ENST00000498160 AFTPHQ6ULP2 937 aa17.52■□□□□ 0.4
CTDSP1-215ENST00000498160 HSD11B1LQ7Z5J1 315 aa17.52■□□□□ 0.4
CTDSP1-215ENST00000498160 ZBED8Q8IZ13 594 aa17.52■□□□□ 0.4
CTDSP1-215ENST00000498160 TRAM1L1Q8N609 369 aa17.52■□□□□ 0.4
CTDSP1-215ENST00000498160 OR4K2Q8NGD2 314 aa17.52■□□□□ 0.4
CTDSP1-215ENST00000498160 SKA1Q96BD8 255 aa17.52■□□□□ 0.4
CTDSP1-215ENST00000498160 ULK4Q96C45 1275 aa17.52■□□□□ 0.4
CTDSP1-215ENST00000498160 AP2M1Q96CW1 435 aa17.52■□□□□ 0.4
CTDSP1-215ENST00000498160 TTC1Q99614 292 aa17.52■□□□□ 0.4
CTDSP1-215ENST00000498160 SAYSD1Q9NPB0 183 aa17.52■□□□□ 0.4
CTDSP1-215ENST00000498160 ZC3H7BQ9UGR2 993 aaKnown RBP17.52■□□□□ 0.4
CTDSP1-215ENST00000498160 SUSD2Q9UGT4 822 aa17.52■□□□□ 0.4
CTDSP1-215ENST00000498160 NFU1Q9UMS0 254 aa17.52■□□□□ 0.4
CTDSP1-215ENST00000498160 HS3ST3A1Q9Y663 406 aa17.52■□□□□ 0.4
CTDSP1-215ENST00000498160 TEX264Q9Y6I9 313 aa17.52■□□□□ 0.4
CTDSP1-215ENST00000498160 TRPM6Q9BX84 2022 aa17.52■□□□□ 0.39
CTDSP1-215ENST00000498160 EML5Q05BV3 1969 aa17.51■□□□□ 0.39
CTDSP1-215ENST00000498160 GLYATL1P3A0A0U1RQE8 302 aa17.51■□□□□ 0.39
CTDSP1-215ENST00000498160 PRR5-ARHGAP8B1AHC4 643 aa17.51■□□□□ 0.39
CTDSP1-215ENST00000498160 FPGTO14772 594 aa17.51■□□□□ 0.39
CTDSP1-215ENST00000498160 AURKAO14965 403 aa17.51■□□□□ 0.39
CTDSP1-215ENST00000498160 PFDN6O15212 129 aa17.51■□□□□ 0.39
CTDSP1-215ENST00000498160 IGHV4-34P06331 123 aa17.51■□□□□ 0.39
CTDSP1-215ENST00000498160 ITGALP20701 1170 aa17.51■□□□□ 0.39
CTDSP1-215ENST00000498160 HOXD12P35452 270 aa17.51■□□□□ 0.39
CTDSP1-215ENST00000498160 ETV3P41162 512 aa17.51■□□□□ 0.39
CTDSP1-215ENST00000498160 PPP2CBP62714 309 aa17.51■□□□□ 0.39
CTDSP1-215ENST00000498160 PPP2CAP67775 309 aa17.51■□□□□ 0.39
CTDSP1-215ENST00000498160 OVGP1Q12889 678 aa17.51■□□□□ 0.39
CTDSP1-215ENST00000498160 GPR33Q49SQ1 333 aa17.51■□□□□ 0.39
CTDSP1-215ENST00000498160 AARS2Q5JTZ9 985 aaKnown RBP17.51■□□□□ 0.39
CTDSP1-215ENST00000498160 SEL1L3Q68CR1 1132 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms