RNA–Protein interactions for RNA: ENST00000497815.5

CUX1-210, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-210ENST00000497815 TP53I13Q8NBR0 393 aaPredicted RBP11.88□□□□□ -0.51
CUX1-210ENST00000497815 PLA2G15Q8NCC3 412 aa11.88□□□□□ -0.51
CUX1-210ENST00000497815 BBOF1Q8ND07 529 aa11.88□□□□□ -0.51
CUX1-210ENST00000497815 PPHLN1Q8NEY8 458 aaKnown RBP11.88□□□□□ -0.51
CUX1-210ENST00000497815 SCAMP4Q969E2 229 aa11.88□□□□□ -0.51
CUX1-210ENST00000497815 SERPINB12Q96P63 405 aa11.88□□□□□ -0.51
CUX1-210ENST00000497815 ORAI3Q9BRQ5 295 aa11.88□□□□□ -0.51
CUX1-210ENST00000497815 RIOK2Q9BVS4 552 aaKnown RBP11.88□□□□□ -0.51
CUX1-210ENST00000497815 ABCG8Q9H221 673 aa11.88□□□□□ -0.51
CUX1-210ENST00000497815 EPB41L5Q9HCM4 733 aa11.88□□□□□ -0.51
CUX1-210ENST00000497815 XAB2Q9HCS7 855 aaKnown RBP11.88□□□□□ -0.51
CUX1-210ENST00000497815 TMEM74BQ9NUR3 256 aa11.88□□□□□ -0.51
CUX1-210ENST00000497815 SYBUQ9NX95 663 aa11.88□□□□□ -0.51
CUX1-210ENST00000497815 GRHL1Q9NZI5 618 aa11.88□□□□□ -0.51
CUX1-210ENST00000497815 BFARQ9NZS9 450 aa11.88□□□□□ -0.51
CUX1-210ENST00000497815 WHRNQ9P202 907 aa11.88□□□□□ -0.51
CUX1-210ENST00000497815 DMGDHQ9UI17 866 aaKnown RBP11.88□□□□□ -0.51
CUX1-210ENST00000497815 DMTF1Q9Y222 760 aa11.88□□□□□ -0.51
CUX1-210ENST00000497815 PKP3Q9Y446 797 aa11.88□□□□□ -0.51
CUX1-210ENST00000497815 PRAMEF26H0Y7S4 382 aa11.87□□□□□ -0.51
CUX1-210ENST00000497815 H0Y8X5 98 aa11.87□□□□□ -0.51
CUX1-210ENST00000497815 FPGTO14772 594 aa11.87□□□□□ -0.51
CUX1-210ENST00000497815 LDB2O43679 373 aa11.87□□□□□ -0.51
CUX1-210ENST00000497815 BANF1O75531 89 aa11.87□□□□□ -0.51
CUX1-210ENST00000497815 SLU7O95391 586 aaKnown RBP11.87□□□□□ -0.51
CUX1-210ENST00000497815 BPIP17213 487 aa11.87□□□□□ -0.51
CUX1-210ENST00000497815 IGFALSP35858 605 aa11.87□□□□□ -0.51
CUX1-210ENST00000497815 HMGCLP35914 325 aa11.87□□□□□ -0.51
CUX1-210ENST00000497815 NPY2RP49146 381 aa11.87□□□□□ -0.51
CUX1-210ENST00000497815 PLTPP55058 493 aa11.87□□□□□ -0.51
CUX1-210ENST00000497815 STAT4Q14765 748 aa11.87□□□□□ -0.51
CUX1-210ENST00000497815 CCDC6Q16204 474 aa11.87□□□□□ -0.51
CUX1-210ENST00000497815 WSCD2Q2TBF2 565 aa11.87□□□□□ -0.51
CUX1-210ENST00000497815 BBS9Q3SYG4 887 aa11.87□□□□□ -0.51
CUX1-210ENST00000497815 GLE1Q53GS7 698 aaKnown RBP11.87□□□□□ -0.51
CUX1-210ENST00000497815 HP1BP3Q5SSJ5 553 aaPredicted RBP11.87□□□□□ -0.51
CUX1-210ENST00000497815 FNBP1LQ5T0N5 605 aa11.87□□□□□ -0.51
CUX1-210ENST00000497815 RAET1GQ6H3X3 334 aa11.87□□□□□ -0.51
CUX1-210ENST00000497815 CASC4Q6P4E1 433 aa11.87□□□□□ -0.51
CUX1-210ENST00000497815 LAYNQ6UX15 382 aa11.87□□□□□ -0.51
CUX1-210ENST00000497815 MICALCLQ6ZW33 695 aa11.87□□□□□ -0.51
CUX1-210ENST00000497815 PELI3Q8N2H9 469 aa11.87□□□□□ -0.51
CUX1-210ENST00000497815 GPR26Q8NDV2 337 aa11.87□□□□□ -0.51
CUX1-210ENST00000497815 OR4K2Q8NGD2 314 aa11.87□□□□□ -0.51
CUX1-210ENST00000497815 OR13C4Q8NGS5 318 aa11.87□□□□□ -0.51
CUX1-210ENST00000497815 ASB12Q8WXK4 309 aa11.87□□□□□ -0.51
CUX1-210ENST00000497815 IFT81Q8WYA0 676 aa11.87□□□□□ -0.51
CUX1-210ENST00000497815 DNASE2BQ8WZ79 361 aa11.87□□□□□ -0.51
CUX1-210ENST00000497815 CENPTQ96BT3 561 aa11.87□□□□□ -0.51
CUX1-210ENST00000497815 AP2M1Q96CW1 435 aa11.87□□□□□ -0.51
CUX1-210ENST00000497815 DNAJC1Q96KC8 554 aaKnown RBP11.87□□□□□ -0.51
CUX1-210ENST00000497815 KLF6Q99612 283 aaPredicted RBP11.87□□□□□ -0.51
CUX1-210ENST00000497815 IL22Q9GZX6 179 aa11.87□□□□□ -0.51
CUX1-210ENST00000497815 ARRDC1-AS1Q9H2J1 176 aa11.87□□□□□ -0.51
CUX1-210ENST00000497815 FAM83DQ9H4H8 585 aa11.87□□□□□ -0.51
CUX1-210ENST00000497815 TM9SF3Q9HD45 589 aa11.87□□□□□ -0.51
CUX1-210ENST00000497815 CHRAC1Q9NRG0 131 aa11.87□□□□□ -0.51
CUX1-210ENST00000497815 IL17CQ9P0M4 197 aa11.87□□□□□ -0.51
CUX1-210ENST00000497815 PILRBQ9UKJ0 227 aa11.87□□□□□ -0.51
CUX1-210ENST00000497815 TCAF1Q9Y4C2 921 aa11.87□□□□□ -0.51
CUX1-210ENST00000497815 MAD1L1Q9Y6D9 718 aa11.87□□□□□ -0.51
CUX1-210ENST00000497815 NUMA1Q14980 2115 aa11.87□□□□□ -0.51
CUX1-210ENST00000497815 HEATR9A2RTY3 570 aa11.86□□□□□ -0.51
CUX1-210ENST00000497815 POM121BA6NF01 834 aa11.86□□□□□ -0.51
CUX1-210ENST00000497815 SDR42E2A6NKP2 422 aa11.86□□□□□ -0.51
CUX1-210ENST00000497815 K7ESM1 405 aa11.86□□□□□ -0.51
CUX1-210ENST00000497815 NDC80O14777 642 aa11.86□□□□□ -0.51
CUX1-210ENST00000497815 TP73O15350 636 aa11.86□□□□□ -0.51
CUX1-210ENST00000497815 BCAT2O15382 392 aaPredicted RBP11.86□□□□□ -0.51
CUX1-210ENST00000497815 MLNP12872 115 aa11.86□□□□□ -0.51
CUX1-210ENST00000497815 GNSP15586 552 aa11.86□□□□□ -0.51
CUX1-210ENST00000497815 ADRA1DP25100 572 aa11.86□□□□□ -0.51
CUX1-210ENST00000497815 NUDT1P36639 197 aa11.86□□□□□ -0.51
CUX1-210ENST00000497815 SPAM1P38567 509 aa11.86□□□□□ -0.51
CUX1-210ENST00000497815 NBL1P41271 181 aa11.86□□□□□ -0.51
CUX1-210ENST00000497815 ZNF140P52738 457 aaPredicted RBP11.86□□□□□ -0.51
CUX1-210ENST00000497815 PDE1BQ01064 536 aa11.86□□□□□ -0.51
CUX1-210ENST00000497815 DHX9Q08211 1270 aaKnown RBP11.86□□□□□ -0.51
CUX1-210ENST00000497815 INPP5AQ14642 412 aa11.86□□□□□ -0.51
CUX1-210ENST00000497815 MSS51Q4VC12 460 aa11.86□□□□□ -0.51
CUX1-210ENST00000497815 PCID2Q5JVF3 399 aa11.86□□□□□ -0.51
CUX1-210ENST00000497815 LAIR1Q6GTX8 287 aa11.86□□□□□ -0.51
CUX1-210ENST00000497815 CES3Q6UWW8 571 aa11.86□□□□□ -0.51
CUX1-210ENST00000497815 FAM151BQ6UXP7 276 aa11.86□□□□□ -0.51
CUX1-210ENST00000497815 GCNT7Q6ZNI0 430 aa11.86□□□□□ -0.51
CUX1-210ENST00000497815 PTAR1Q7Z6K3 402 aaPredicted RBP11.86□□□□□ -0.51
CUX1-210ENST00000497815 SYT12Q8IV01 421 aa11.86□□□□□ -0.51
CUX1-210ENST00000497815 NRSN1Q8IZ57 195 aa11.86□□□□□ -0.51
CUX1-210ENST00000497815 PDIK1LQ8N165 341 aa11.86□□□□□ -0.51
CUX1-210ENST00000497815 SUMF1Q8NBK3 374 aa11.86□□□□□ -0.51
CUX1-210ENST00000497815 ZNF778Q96MU6 729 aa11.86□□□□□ -0.51
CUX1-210ENST00000497815 LENG8Q96PV6 779 aaPredicted RBP11.86□□□□□ -0.51
CUX1-210ENST00000497815 RANBP9Q96S59 729 aa11.86□□□□□ -0.51
CUX1-210ENST00000497815 AGAP2Q99490 1192 aa11.86□□□□□ -0.51
CUX1-210ENST00000497815 TRIM56Q9BRZ2 755 aaKnown RBP11.86□□□□□ -0.51
CUX1-210ENST00000497815 SPATA16Q9BXB7 569 aa11.86□□□□□ -0.51
CUX1-210ENST00000497815 SEMA4AQ9H3S1 761 aa11.86□□□□□ -0.51
CUX1-210ENST00000497815 SMOC1Q9H4F8 434 aa11.86□□□□□ -0.51
CUX1-210ENST00000497815 SAMD15Q9P1V8 674 aa11.86□□□□□ -0.51
CUX1-210ENST00000497815 SLC2A6Q9UGQ3 507 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms