RNA–Protein interactions for RNA: ENST00000497345.1

CMSS1-209, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-209ENST00000497345 CEP295NLQ96MC4 621 aa4.83□□□□□ -1.64
CMSS1-209ENST00000497345 ZIM3Q96PE6 472 aa4.83□□□□□ -1.64
CMSS1-209ENST00000497345 DDX50Q9BQ39 737 aaKnown RBP4.83□□□□□ -1.64
CMSS1-209ENST00000497345 FERMT1Q9BQL6 677 aa4.83□□□□□ -1.64
CMSS1-209ENST00000497345 MLPHQ9BV36 600 aaPredicted RBP4.83□□□□□ -1.64
CMSS1-209ENST00000497345 FICDQ9BVA6 458 aa4.83□□□□□ -1.64
CMSS1-209ENST00000497345 BRD8Q9H0E9 1235 aa4.83□□□□□ -1.64
CMSS1-209ENST00000497345 ACBD3Q9H3P7 528 aa4.83□□□□□ -1.64
CMSS1-209ENST00000497345 CDC42EP4Q9H3Q1 356 aaKnown RBP4.83□□□□□ -1.64
CMSS1-209ENST00000497345 TMEM248Q9NWD8 314 aa4.83□□□□□ -1.64
CMSS1-209ENST00000497345 CLDND1Q9NY35 253 aa4.83□□□□□ -1.64
CMSS1-209ENST00000497345 NINJ2Q9NZG7 142 aa4.83□□□□□ -1.64
CMSS1-209ENST00000497345 VPS28Q9UK41 221 aa4.83□□□□□ -1.64
CMSS1-209ENST00000497345 BRCA2P51587 3418 aa4.83□□□□□ -1.64
CMSS1-209ENST00000497345 OBSL1O75147 1896 aa4.83□□□□□ -1.64
CMSS1-209ENST00000497345 NYNRINQ9P2P1 1898 aaKnown RBP4.83□□□□□ -1.64
CMSS1-209ENST00000497345 PDE4DIPQ5VU43 2346 aa4.83□□□□□ -1.64
CMSS1-209ENST00000497345 MYO9BQ13459 2157 aa4.82□□□□□ -1.64
CMSS1-209ENST00000497345 ATG2AQ2TAZ0 1938 aa4.82□□□□□ -1.64
CMSS1-209ENST00000497345 MTCL1Q9Y4B5 1905 aaKnown RBP4.82□□□□□ -1.64
CMSS1-209ENST00000497345 POC1B-GALNT4F8VUJ3 575 aa4.82□□□□□ -1.64
CMSS1-209ENST00000497345 H3BQF6 201 aa4.82□□□□□ -1.64
CMSS1-209ENST00000497345 K7ERQ8 282 aa4.82□□□□□ -1.64
CMSS1-209ENST00000497345 ZNF197O14709 1029 aa4.82□□□□□ -1.64
CMSS1-209ENST00000497345 MAP2K7O14733 419 aa4.82□□□□□ -1.64
CMSS1-209ENST00000497345 FFAR3O14843 346 aa4.82□□□□□ -1.64
CMSS1-209ENST00000497345 TRIM24O15164 1050 aa4.82□□□□□ -1.64
CMSS1-209ENST00000497345 MATN3O15232 486 aa4.82□□□□□ -1.64
CMSS1-209ENST00000497345 TP73O15350 636 aa4.82□□□□□ -1.64
CMSS1-209ENST00000497345 NCAM2O15394 837 aa4.82□□□□□ -1.64
CMSS1-209ENST00000497345 OPHN1O60890 802 aa4.82□□□□□ -1.64
CMSS1-209ENST00000497345 PPFIA2O75334 1257 aa4.82□□□□□ -1.64
CMSS1-209ENST00000497345 CLDN11O75508 207 aa4.82□□□□□ -1.64
CMSS1-209ENST00000497345 LUC7L3O95232 432 aaKnown RBP4.82□□□□□ -1.64
CMSS1-209ENST00000497345 FGF19O95750 216 aa4.82□□□□□ -1.64
CMSS1-209ENST00000497345 GLP2RO95838 553 aa4.82□□□□□ -1.64
CMSS1-209ENST00000497345 MT-CYBP00156 380 aaPredicted RBP4.82□□□□□ -1.64
CMSS1-209ENST00000497345 CPP00450 1065 aa4.82□□□□□ -1.64
CMSS1-209ENST00000497345 SLC4A1P02730 911 aa4.82□□□□□ -1.64
CMSS1-209ENST00000497345 CD3EP07766 207 aa4.82□□□□□ -1.64
CMSS1-209ENST00000497345 F7P08709 466 aaPredicted RBP4.82□□□□□ -1.64
CMSS1-209ENST00000497345 IFNGR1P15260 489 aa4.82□□□□□ -1.64
CMSS1-209ENST00000497345 ARSAP15289 507 aa4.82□□□□□ -1.64
CMSS1-209ENST00000497345 CCNCP24863 283 aa4.82□□□□□ -1.64
CMSS1-209ENST00000497345 OAS2P29728 719 aaKnown RBP4.82□□□□□ -1.64
CMSS1-209ENST00000497345 SSTR1P30872 391 aa4.82□□□□□ -1.64
CMSS1-209ENST00000497345 CD70P32970 193 aa4.82□□□□□ -1.64
CMSS1-209ENST00000497345 FDFT1P37268 417 aa4.82□□□□□ -1.64
CMSS1-209ENST00000497345 CD86P42081 329 aa4.82□□□□□ -1.64
CMSS1-209ENST00000497345 MMP13P45452 471 aa4.82□□□□□ -1.64
CMSS1-209ENST00000497345 LIMS1P48059 325 aa4.82□□□□□ -1.64
CMSS1-209ENST00000497345 ZNF135P52742 658 aaPredicted RBP4.82□□□□□ -1.64
CMSS1-209ENST00000497345 NDST2P52849 883 aa4.82□□□□□ -1.64
CMSS1-209ENST00000497345 SLC7A9P82251 487 aa4.82□□□□□ -1.64
CMSS1-209ENST00000497345 DLX2Q07687 328 aaPredicted RBP4.82□□□□□ -1.64
CMSS1-209ENST00000497345 SLC29A2Q14542 456 aa4.82□□□□□ -1.64
CMSS1-209ENST00000497345 ZNF235Q14590 738 aa4.82□□□□□ -1.64
CMSS1-209ENST00000497345 KCNJ11Q14654 390 aa4.82□□□□□ -1.64
CMSS1-209ENST00000497345 SLMAPQ14BN4 828 aa4.82□□□□□ -1.64
CMSS1-209ENST00000497345 MORF4L2Q15014 288 aa4.82□□□□□ -1.64
CMSS1-209ENST00000497345 EFTUD2Q15029 972 aaKnown RBP eCLIP4.82□□□□□ -1.64
CMSS1-209ENST00000497345 LONRF1Q17RB8 773 aa4.82□□□□□ -1.64
CMSS1-209ENST00000497345 PARP6Q2NL67 630 aa4.82□□□□□ -1.64
CMSS1-209ENST00000497345 KRT71Q3SY84 523 aa4.82□□□□□ -1.64
CMSS1-209ENST00000497345 CCDC38Q502W7 563 aa4.82□□□□□ -1.64
CMSS1-209ENST00000497345 TEX44Q53QW1 395 aa4.82□□□□□ -1.64
CMSS1-209ENST00000497345 HSP90B2PQ58FF3 399 aa4.82□□□□□ -1.64
CMSS1-209ENST00000497345 FAM78AQ5JUQ0 283 aa4.82□□□□□ -1.64
CMSS1-209ENST00000497345 ATXN7L2Q5T6C5 722 aaPredicted RBP4.82□□□□□ -1.64
CMSS1-209ENST00000497345 MARC1Q5VT66 337 aa4.82□□□□□ -1.64
CMSS1-209ENST00000497345 ALS2CLQ60I27 953 aa4.82□□□□□ -1.64
CMSS1-209ENST00000497345 AFMIDQ63HM1 303 aa4.82□□□□□ -1.64
CMSS1-209ENST00000497345 ITPRIPL1Q6GPH6 555 aa4.82□□□□□ -1.64
CMSS1-209ENST00000497345 ANKRD54Q6NXT1 300 aa4.82□□□□□ -1.64
CMSS1-209ENST00000497345 RHBDF2Q6PJF5 856 aa4.82□□□□□ -1.64
CMSS1-209ENST00000497345 HTR3DQ70Z44 454 aa4.82□□□□□ -1.64
CMSS1-209ENST00000497345 PCGF5Q86SE9 256 aa4.82□□□□□ -1.64
CMSS1-209ENST00000497345 HOOK3Q86VS8 718 aa4.82□□□□□ -1.64
CMSS1-209ENST00000497345 LSRQ86X29 649 aaPredicted RBP4.82□□□□□ -1.64
CMSS1-209ENST00000497345 TMEM25Q86YD3 366 aa4.82□□□□□ -1.64
CMSS1-209ENST00000497345 MFN1Q8IWA4 741 aa4.82□□□□□ -1.64
CMSS1-209ENST00000497345 PDIK1LQ8N165 341 aa4.82□□□□□ -1.64
CMSS1-209ENST00000497345 UMODL1-AS1Q8N2C9 162 aa4.82□□□□□ -1.64
CMSS1-209ENST00000497345 MPP5Q8N3R9 675 aa4.82□□□□□ -1.64
CMSS1-209ENST00000497345 PGBD5Q8N414 524 aa4.82□□□□□ -1.64
CMSS1-209ENST00000497345 SH2D3CQ8N5H7 860 aa4.82□□□□□ -1.64
CMSS1-209ENST00000497345 LZTR1Q8N653 840 aa4.82□□□□□ -1.64
CMSS1-209ENST00000497345 CNTD1Q8N815 330 aa4.82□□□□□ -1.64
CMSS1-209ENST00000497345 NAT8LQ8N9F0 302 aa4.82□□□□□ -1.64
CMSS1-209ENST00000497345 DNAAF3Q8N9W5 541 aa4.82□□□□□ -1.64
CMSS1-209ENST00000497345 FBXO36Q8NEA4 188 aa4.82□□□□□ -1.64
CMSS1-209ENST00000497345 OR6K2Q8NGY2 324 aa4.82□□□□□ -1.64
CMSS1-209ENST00000497345 WFDC5Q8TCV5 224 aa4.82□□□□□ -1.64
CMSS1-209ENST00000497345 ARHGEF2Q92974 986 aaKnown RBP4.82□□□□□ -1.64
CMSS1-209ENST00000497345 PPP2R3CQ969Q6 453 aa4.82□□□□□ -1.64
CMSS1-209ENST00000497345 EXOC4Q96A65 974 aa4.82□□□□□ -1.64
CMSS1-209ENST00000497345 ARL8AQ96BM9 186 aa4.82□□□□□ -1.64
CMSS1-209ENST00000497345 HDAC11Q96DB2 347 aa4.82□□□□□ -1.64
CMSS1-209ENST00000497345 MRPL38Q96DV4 380 aaKnown RBP4.82□□□□□ -1.64
CMSS1-209ENST00000497345 TEKT5Q96M29 485 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms