RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 SKIDA1Q1XH10 827 aa21.73■■□□□ 1.07
C9orf3-222ENST00000496567 ZC3H14Q6PJT7 736 aaKnown RBP21.73■■□□□ 1.07
C9orf3-222ENST00000496567 Q6ZVL8 140 aa21.73■■□□□ 1.07
C9orf3-222ENST00000496567 TECPR1Q7Z6L1 1165 aa21.73■■□□□ 1.07
C9orf3-222ENST00000496567 PEX13Q92968 403 aa21.73■■□□□ 1.07
C9orf3-222ENST00000496567 DTD2Q96FN9 168 aa21.73■■□□□ 1.07
C9orf3-222ENST00000496567 SIGLEC10Q96LC7 697 aa21.73■■□□□ 1.07
C9orf3-222ENST00000496567 PWWP2AQ96N64 755 aa21.73■■□□□ 1.07
C9orf3-222ENST00000496567 NAT9Q9BTE0 207 aa21.73■■□□□ 1.07
C9orf3-222ENST00000496567 KIFC1Q9BW19 673 aa21.73■■□□□ 1.07
C9orf3-222ENST00000496567 ANKZF1Q9H8Y5 726 aa21.73■■□□□ 1.07
C9orf3-222ENST00000496567 MRM3Q9HC36 420 aaKnown RBP21.73■■□□□ 1.07
C9orf3-222ENST00000496567 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa21.72■■□□□ 1.07
C9orf3-222ENST00000496567 HADHAP40939 763 aa21.72■■□□□ 1.07
C9orf3-222ENST00000496567 ZNF140P52738 457 aaPredicted RBP21.72■■□□□ 1.07
C9orf3-222ENST00000496567 ELF2Q15723 593 aa21.72■■□□□ 1.07
C9orf3-222ENST00000496567 TSTD2Q5T7W7 516 aa21.72■■□□□ 1.07
C9orf3-222ENST00000496567 CEP128Q6ZU80 1094 aa21.72■■□□□ 1.07
C9orf3-222ENST00000496567 TMEFF1Q8IYR6 380 aa21.72■■□□□ 1.07
C9orf3-222ENST00000496567 EIF1ADQ8N9N8 165 aaKnown RBP21.72■■□□□ 1.07
C9orf3-222ENST00000496567 OR4K2Q8NGD2 314 aa21.72■■□□□ 1.07
C9orf3-222ENST00000496567 KLK6Q92876 244 aa21.72■■□□□ 1.07
C9orf3-222ENST00000496567 NUS1Q96E22 293 aa21.72■■□□□ 1.07
C9orf3-222ENST00000496567 CHRAC1Q9NRG0 131 aa21.72■■□□□ 1.07
C9orf3-222ENST00000496567 SOX13Q9UN79 622 aa21.72■■□□□ 1.07
C9orf3-222ENST00000496567 DMTF1Q9Y222 760 aa21.72■■□□□ 1.07
C9orf3-222ENST00000496567 MAD1L1Q9Y6D9 718 aa21.72■■□□□ 1.07
C9orf3-222ENST00000496567 MEI4A8MW99 385 aa21.71■■□□□ 1.07
C9orf3-222ENST00000496567 E7ESA3 106 aa21.71■■□□□ 1.07
C9orf3-222ENST00000496567 SLC31A1O15431 190 aa21.71■■□□□ 1.07
C9orf3-222ENST00000496567 BUD23O43709 281 aaKnown RBP21.71■■□□□ 1.07
C9orf3-222ENST00000496567 RHOBTB1O94844 696 aa21.71■■□□□ 1.07
C9orf3-222ENST00000496567 GM2AP17900 193 aa21.71■■□□□ 1.07
C9orf3-222ENST00000496567 PDIA2Q13087 525 aaKnown RBP21.71■■□□□ 1.07
C9orf3-222ENST00000496567 FGL2Q14314 439 aa21.71■■□□□ 1.07
C9orf3-222ENST00000496567 MSS51Q4VC12 460 aa21.71■■□□□ 1.07
C9orf3-222ENST00000496567 PMS2CLQ68D20 193 aa21.71■■□□□ 1.07
C9orf3-222ENST00000496567 ZNF765Q7L2R6 523 aa21.71■■□□□ 1.07
C9orf3-222ENST00000496567 CCNJLQ8IV13 435 aa21.71■■□□□ 1.07
C9orf3-222ENST00000496567 MPP5Q8N3R9 675 aa21.71■■□□□ 1.07
C9orf3-222ENST00000496567 DEFB119Q8N690 84 aa21.71■■□□□ 1.07
C9orf3-222ENST00000496567 MYRIPQ8NFW9 859 aa21.71■■□□□ 1.07
C9orf3-222ENST00000496567 SNX19Q92543 992 aa21.71■■□□□ 1.07
C9orf3-222ENST00000496567 STAMBPL1Q96FJ0 436 aa21.71■■□□□ 1.07
C9orf3-222ENST00000496567 ZC3H10Q96K80 434 aaKnown RBP21.71■■□□□ 1.07
C9orf3-222ENST00000496567 HSPA12BQ96MM6 686 aa21.71■■□□□ 1.07
C9orf3-222ENST00000496567 LENG8Q96PV6 779 aaPredicted RBP21.71■■□□□ 1.07
C9orf3-222ENST00000496567 PLEKHG4BQ96PX9 1271 aa21.71■■□□□ 1.07
C9orf3-222ENST00000496567 FMO2Q99518 471 aa21.71■■□□□ 1.07
C9orf3-222ENST00000496567 BPIFA1Q9NP55 256 aa21.71■■□□□ 1.07
C9orf3-222ENST00000496567 NLE1Q9NVX2 485 aaPredicted RBP21.71■■□□□ 1.07
C9orf3-222ENST00000496567 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.71■■□□□ 1.07
C9orf3-222ENST00000496567 KCTD3Q9Y597 815 aa21.71■■□□□ 1.07
C9orf3-222ENST00000496567 V9GYY5 206 aaPredicted RBP21.71■■□□□ 1.07
C9orf3-222ENST00000496567 LRRK1Q38SD2 2015 aa21.71■■□□□ 1.07
C9orf3-222ENST00000496567 MYLKQ15746 1914 aa21.7■■□□□ 1.07
C9orf3-222ENST00000496567 BPIP17213 487 aa21.7■■□□□ 1.06
C9orf3-222ENST00000496567 HNRNPA2B1P22626 353 aaKnown RBP21.7■■□□□ 1.06
C9orf3-222ENST00000496567 PTPN5P54829 565 aa21.7■■□□□ 1.06
C9orf3-222ENST00000496567 DCDC1P59894 354 aa21.7■■□□□ 1.06
C9orf3-222ENST00000496567 SIM2Q14190 667 aaPredicted RBP21.7■■□□□ 1.06
C9orf3-222ENST00000496567 LRRC14Q15048 493 aa21.7■■□□□ 1.06
C9orf3-222ENST00000496567 ERCC6LQ2NKX8 1250 aa21.7■■□□□ 1.06
C9orf3-222ENST00000496567 PLK5Q496M5 336 aa21.7■■□□□ 1.06
C9orf3-222ENST00000496567 WDR45BQ5MNZ6 344 aa21.7■■□□□ 1.06
C9orf3-222ENST00000496567 GPR161Q8N6U8 529 aaKnown RBP21.7■■□□□ 1.06
C9orf3-222ENST00000496567 DENND6BQ8NEG7 585 aa21.7■■□□□ 1.06
C9orf3-222ENST00000496567 OR13C4Q8NGS5 318 aa21.7■■□□□ 1.06
C9orf3-222ENST00000496567 EBNA1BP2Q99848 306 aaKnown RBP21.7■■□□□ 1.06
C9orf3-222ENST00000496567 IRF2BPLQ9H1B7 796 aa21.7■■□□□ 1.06
C9orf3-222ENST00000496567 FAM83DQ9H4H8 585 aa21.7■■□□□ 1.06
C9orf3-222ENST00000496567 NFKBIL1Q9UBC1 381 aaPredicted RBP21.7■■□□□ 1.06
C9orf3-222ENST00000496567 FAM237BA0A1B0GVD1 139 aa21.7■■□□□ 1.06
C9orf3-222ENST00000496567 A0A1W2PPC4 97 aa21.7■■□□□ 1.06
C9orf3-222ENST00000496567 GOLGA8CPA6NN73 597 aa21.7■■□□□ 1.06
C9orf3-222ENST00000496567 PSMA3P25788 255 aa21.7■■□□□ 1.06
C9orf3-222ENST00000496567 CD27P26842 260 aa21.7■■□□□ 1.06
C9orf3-222ENST00000496567 TNFRSF8P28908 595 aa21.7■■□□□ 1.06
C9orf3-222ENST00000496567 AKT2P31751 481 aa21.7■■□□□ 1.06
C9orf3-222ENST00000496567 SPAM1P38567 509 aa21.7■■□□□ 1.06
C9orf3-222ENST00000496567 DPTQ07507 201 aa21.7■■□□□ 1.06
C9orf3-222ENST00000496567 NLRP8Q86W28 1048 aa21.7■■□□□ 1.06
C9orf3-222ENST00000496567 CCDC25Q86WR0 208 aa21.7■■□□□ 1.06
C9orf3-222ENST00000496567 SLC41A1Q8IVJ1 513 aa21.7■■□□□ 1.06
C9orf3-222ENST00000496567 AGGF1Q8N302 714 aaeCLIP21.7■■□□□ 1.06
C9orf3-222ENST00000496567 DNAJC1Q96KC8 554 aaKnown RBP21.7■■□□□ 1.06
C9orf3-222ENST00000496567 EPC1Q9H2F5 836 aa21.7■■□□□ 1.06
C9orf3-222ENST00000496567 CD84Q9UIB8 345 aa21.7■■□□□ 1.06
C9orf3-222ENST00000496567 NFU1Q9UMS0 254 aa21.7■■□□□ 1.06
C9orf3-222ENST00000496567 TEX264Q9Y6I9 313 aa21.7■■□□□ 1.06
C9orf3-222ENST00000496567 PRAMEF26H0Y7S4 382 aa21.69■■□□□ 1.06
C9orf3-222ENST00000496567 BANF1O75531 89 aa21.69■■□□□ 1.06
C9orf3-222ENST00000496567 TTC4O95801 387 aa21.69■■□□□ 1.06
C9orf3-222ENST00000496567 PGAM1P18669 254 aa21.69■■□□□ 1.06
C9orf3-222ENST00000496567 MCM3P25205 808 aa21.69■■□□□ 1.06
C9orf3-222ENST00000496567 ECHS1P30084 290 aa21.69■■□□□ 1.06
C9orf3-222ENST00000496567 ELK3P41970 407 aa21.69■■□□□ 1.06
C9orf3-222ENST00000496567 PTPRCAPQ14761 206 aa21.69■■□□□ 1.06
C9orf3-222ENST00000496567 RFLNAQ6ZTI6 216 aa21.69■■□□□ 1.06
C9orf3-222ENST00000496567 ZBED8Q8IZ13 594 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms