RNA–Protein interactions for RNA: ENST00000496441.5

CDCA7-208, Transcript of cell division cycle associated 7, humanhuman

TSL 2

Gene CDCA7, Length 2,943 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA7-208ENST00000496441 GABPB2Q8TAK5 448 aaPredicted RBP11.53□□□□□ -0.56
CDCA7-208ENST00000496441 PPP2R3CQ969Q6 453 aa11.53□□□□□ -0.56
CDCA7-208ENST00000496441 PPWD1Q96BP3 646 aaKnown RBP11.53□□□□□ -0.56
CDCA7-208ENST00000496441 TUBGCP3Q96CW5 907 aa11.53□□□□□ -0.56
CDCA7-208ENST00000496441 CDKN2AIPNLQ96HQ2 116 aa11.53□□□□□ -0.56
CDCA7-208ENST00000496441 PKP2Q99959 881 aa11.53□□□□□ -0.56
CDCA7-208ENST00000496441 MRM3Q9HC36 420 aaKnown RBP11.53□□□□□ -0.56
CDCA7-208ENST00000496441 COMMD10Q9Y6G5 202 aa11.53□□□□□ -0.56
CDCA7-208ENST00000496441 SLC38A8A6NNN8 435 aa11.53□□□□□ -0.56
CDCA7-208ENST00000496441 CDC7O00311 574 aa11.53□□□□□ -0.56
CDCA7-208ENST00000496441 FBP2O00757 339 aa11.53□□□□□ -0.56
CDCA7-208ENST00000496441 TPST1O60507 370 aa11.53□□□□□ -0.56
CDCA7-208ENST00000496441 PRAMEF11O60813 436 aa11.53□□□□□ -0.56
CDCA7-208ENST00000496441 HTR7P34969 479 aa11.53□□□□□ -0.56
CDCA7-208ENST00000496441 YBX1P67809 324 aaKnown RBP11.53□□□□□ -0.56
CDCA7-208ENST00000496441 PLIN5Q00G26 463 aa11.53□□□□□ -0.56
CDCA7-208ENST00000496441 GRB7Q14451 532 aa11.53□□□□□ -0.56
CDCA7-208ENST00000496441 TSNQ15631 228 aaKnown RBP11.53□□□□□ -0.56
CDCA7-208ENST00000496441 VPS26BQ4G0F5 336 aa11.53□□□□□ -0.56
CDCA7-208ENST00000496441 UNC50Q53HI1 259 aa11.53□□□□□ -0.56
CDCA7-208ENST00000496441 ZRANB3Q5FWF4 1079 aa11.53□□□□□ -0.56
CDCA7-208ENST00000496441 ZNF678Q5SXM1 525 aa11.53□□□□□ -0.56
CDCA7-208ENST00000496441 SPOUT1Q5T280 376 aaKnown RBP11.53□□□□□ -0.56
CDCA7-208ENST00000496441 C6orf52Q5T4I8 152 aa11.53□□□□□ -0.56
CDCA7-208ENST00000496441 IL23RQ5VWK5 629 aa11.53□□□□□ -0.56
CDCA7-208ENST00000496441 IYDQ6PHW0 289 aa11.53□□□□□ -0.56
CDCA7-208ENST00000496441 LRRC49Q8IUZ0 686 aa11.53□□□□□ -0.56
CDCA7-208ENST00000496441 FAM110BQ8TC76 370 aa11.53□□□□□ -0.56
CDCA7-208ENST00000496441 DCUN1D1Q96GG9 259 aa11.53□□□□□ -0.56
CDCA7-208ENST00000496441 IKZF3Q9UKT9 509 aa11.53□□□□□ -0.56
CDCA7-208ENST00000496441 DNAJC15Q9Y5T4 150 aa11.53□□□□□ -0.56
CDCA7-208ENST00000496441 LOC285095A0A1B0GVY8 99 aa11.52□□□□□ -0.57
CDCA7-208ENST00000496441 C2orf78A6NCI8 922 aa11.52□□□□□ -0.57
CDCA7-208ENST00000496441 WASH4PA8MWX3 477 aa11.52□□□□□ -0.57
CDCA7-208ENST00000496441 PIP5K1BO14986 540 aa11.52□□□□□ -0.57
CDCA7-208ENST00000496441 NIPSNAP2O75323 286 aa11.52□□□□□ -0.57
CDCA7-208ENST00000496441 NDUFS3O75489 264 aa11.52□□□□□ -0.57
CDCA7-208ENST00000496441 KLKB1P03952 638 aa11.52□□□□□ -0.57
CDCA7-208ENST00000496441 ATP6V1B1P15313 513 aa11.52□□□□□ -0.57
CDCA7-208ENST00000496441 CD1DP15813 335 aa11.52□□□□□ -0.57
CDCA7-208ENST00000496441 IMPDH1P20839 514 aa11.52□□□□□ -0.57
CDCA7-208ENST00000496441 PRDX3P30048 256 aaKnown RBP11.52□□□□□ -0.57
CDCA7-208ENST00000496441 OXCT1P55809 520 aa11.52□□□□□ -0.57
CDCA7-208ENST00000496441 PTPRNQ16849 979 aa11.52□□□□□ -0.57
CDCA7-208ENST00000496441 PARP15Q460N3 678 aa11.52□□□□□ -0.57
CDCA7-208ENST00000496441 REP15Q6BDI9 236 aa11.52□□□□□ -0.57
CDCA7-208ENST00000496441 TAS2R42Q7RTR8 314 aa11.52□□□□□ -0.57
CDCA7-208ENST00000496441 AMIGO2Q86SJ2 522 aa11.52□□□□□ -0.57
CDCA7-208ENST00000496441 KLHDC8BQ8IXV7 354 aa11.52□□□□□ -0.57
CDCA7-208ENST00000496441 AFAP1L2Q8N4X5 818 aa11.52□□□□□ -0.57
CDCA7-208ENST00000496441 FBXO22Q8NEZ5 403 aa11.52□□□□□ -0.57
CDCA7-208ENST00000496441 MDGA1Q8NFP4 955 aa11.52□□□□□ -0.57
CDCA7-208ENST00000496441 SPDYE1Q8NFV5 336 aaPredicted RBP11.52□□□□□ -0.57
CDCA7-208ENST00000496441 C19orf60Q96EN9 201 aa11.52□□□□□ -0.57
CDCA7-208ENST00000496441 CDK15Q96Q40 435 aa11.52□□□□□ -0.57
CDCA7-208ENST00000496441 GPR21Q99679 349 aa11.52□□□□□ -0.57
CDCA7-208ENST00000496441 SLC30A3Q99726 388 aa11.52□□□□□ -0.57
CDCA7-208ENST00000496441 TM6SF2Q9BZW4 377 aa11.52□□□□□ -0.57
CDCA7-208ENST00000496441 AKTIPQ9H8T0 292 aa11.52□□□□□ -0.57
CDCA7-208ENST00000496441 TMEM161AQ9NX61 479 aa11.52□□□□□ -0.57
CDCA7-208ENST00000496441 PLK2Q9NYY3 685 aa11.52□□□□□ -0.57
CDCA7-208ENST00000496441 EGFL7Q9UHF1 273 aa11.52□□□□□ -0.57
CDCA7-208ENST00000496441 RNF112Q9ULX5 631 aa11.52□□□□□ -0.57
CDCA7-208ENST00000496441 SNX13Q9Y5W8 968 aa11.52□□□□□ -0.57
CDCA7-208ENST00000496441 PATJQ8NI35 1801 aa11.52□□□□□ -0.57
CDCA7-208ENST00000496441 IGLV3-10A0A075B6K4 115 aa11.52□□□□□ -0.57
CDCA7-208ENST00000496441 NPEPPSL1A6NEC2 478 aa11.52□□□□□ -0.57
CDCA7-208ENST00000496441 BTN3A1O00481 513 aa11.52□□□□□ -0.57
CDCA7-208ENST00000496441 MRASO14807 208 aa11.52□□□□□ -0.57
CDCA7-208ENST00000496441 SYN3O14994 580 aa11.52□□□□□ -0.57
CDCA7-208ENST00000496441 RTN3O95197 1032 aaPredicted RBP11.52□□□□□ -0.57
CDCA7-208ENST00000496441 ALDOCP09972 364 aaKnown RBP11.52□□□□□ -0.57
CDCA7-208ENST00000496441 UQCRBP14927 111 aa11.52□□□□□ -0.57
CDCA7-208ENST00000496441 ZNF37AP17032 561 aaPredicted RBP11.52□□□□□ -0.57
CDCA7-208ENST00000496441 CTPS1P17812 591 aa11.52□□□□□ -0.57
CDCA7-208ENST00000496441 EEF1DP29692 281 aaKnown RBP11.52□□□□□ -0.57
CDCA7-208ENST00000496441 CORO1AP31146 461 aaKnown RBP11.52□□□□□ -0.57
CDCA7-208ENST00000496441 TIAL1Q01085 375 aaKnown RBP eCLIP11.52□□□□□ -0.572e-6■■■□□ 18.6
CDCA7-208ENST00000496441 GPR17Q13304 367 aa11.52□□□□□ -0.57
CDCA7-208ENST00000496441 PLD1Q13393 1074 aa11.52□□□□□ -0.57
CDCA7-208ENST00000496441 RPS6KA2Q15349 733 aa11.52□□□□□ -0.57
CDCA7-208ENST00000496441 PLA2G4EQ3MJ16 856 aa11.52□□□□□ -0.57
CDCA7-208ENST00000496441 PSAPL1Q6NUJ1 521 aa11.52□□□□□ -0.57
CDCA7-208ENST00000496441 CYHR1Q6ZMK1 362 aa11.52□□□□□ -0.57
CDCA7-208ENST00000496441 SIDT2Q8NBJ9 832 aaKnown RBP11.52□□□□□ -0.57
CDCA7-208ENST00000496441 AUTS2Q8WXX7 1259 aa11.52□□□□□ -0.57
CDCA7-208ENST00000496441 PPP1R2P1Q96PQ5 205 aa11.52□□□□□ -0.57
CDCA7-208ENST00000496441 CCDC28BQ9BUN5 200 aa11.52□□□□□ -0.57
CDCA7-208ENST00000496441 ZNF385DQ9H6B1 395 aa11.52□□□□□ -0.57
CDCA7-208ENST00000496441 POLR3BQ9NW08 1133 aaPredicted RBP11.52□□□□□ -0.57
CDCA7-208ENST00000496441 CACNA2D2Q9NY47 1150 aa11.52□□□□□ -0.57
CDCA7-208ENST00000496441 UBA2Q9UBT2 640 aaPredicted RBP11.52□□□□□ -0.57
CDCA7-208ENST00000496441 FKBPLQ9UIM3 349 aa11.52□□□□□ -0.57
CDCA7-208ENST00000496441 PSMD13Q9UNM6 376 aa11.52□□□□□ -0.57
CDCA7-208ENST00000496441 PCDHGA7Q9Y5G6 932 aa11.52□□□□□ -0.57
CDCA7-208ENST00000496441 PRORSD1PA6NEY8 169 aa11.51□□□□□ -0.57
CDCA7-208ENST00000496441 RPP40O75818 363 aaKnown RBP11.51□□□□□ -0.57
CDCA7-208ENST00000496441 HOXD9P28356 352 aaPredicted RBP11.51□□□□□ -0.57
CDCA7-208ENST00000496441 TM4SF4P48230 202 aa11.51□□□□□ -0.57
CDCA7-208ENST00000496441 SLC7A2P52569 658 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms