RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 IGHV1OR21-1A0A087WYE8 117 aa14.23□□□□□ -0.13
VARS-228ENST00000495010 A0A1W2PQ67 120 aa14.23□□□□□ -0.13
VARS-228ENST00000495010 B4E171 279 aa14.23□□□□□ -0.13
VARS-228ENST00000495010 TRAFD1O14545 582 aaPredicted RBP14.23□□□□□ -0.13
VARS-228ENST00000495010 PPM1DO15297 605 aa14.23□□□□□ -0.13
VARS-228ENST00000495010 PRKAR1AP10644 381 aa14.23□□□□□ -0.13
VARS-228ENST00000495010 THRAP10827 490 aa14.23□□□□□ -0.13
VARS-228ENST00000495010 CYP2A6P11509 494 aaPredicted RBP14.23□□□□□ -0.13
VARS-228ENST00000495010 GM2AP17900 193 aa14.23□□□□□ -0.13
VARS-228ENST00000495010 MAP4P27816 1152 aaKnown RBP14.23□□□□□ -0.13
VARS-228ENST00000495010 VIPR1P32241 457 aa14.23□□□□□ -0.13
VARS-228ENST00000495010 TSPAN7P41732 249 aa14.23□□□□□ -0.13
VARS-228ENST00000495010 ACTR1BP42025 376 aa14.23□□□□□ -0.13
VARS-228ENST00000495010 ARSDP51689 593 aa14.23□□□□□ -0.13
VARS-228ENST00000495010 JAM2P57087 298 aa14.23□□□□□ -0.13
VARS-228ENST00000495010 ACTR1AP61163 376 aa14.23□□□□□ -0.13
VARS-228ENST00000495010 GPLD1P80108 840 aa14.23□□□□□ -0.13
VARS-228ENST00000495010 CDK3Q00526 305 aa14.23□□□□□ -0.13
VARS-228ENST00000495010 SEPT6Q14141 434 aa14.23□□□□□ -0.13
VARS-228ENST00000495010 DPCR1Q3MIW9 517 aa14.23□□□□□ -0.13
VARS-228ENST00000495010 ANKS6Q68DC2 871 aa14.23□□□□□ -0.13
VARS-228ENST00000495010 TMEM71Q6P5X7 295 aa14.23□□□□□ -0.13
VARS-228ENST00000495010 DOK6Q6PKX4 331 aa14.23□□□□□ -0.13
VARS-228ENST00000495010 KDELC2Q7Z4H8 507 aa14.23□□□□□ -0.13
VARS-228ENST00000495010 NLGN4XQ8N0W4 816 aa14.23□□□□□ -0.13
VARS-228ENST00000495010 NAGSQ8N159 534 aa14.23□□□□□ -0.13
VARS-228ENST00000495010 NLGN4YQ8NFZ3 816 aaPredicted RBP14.23□□□□□ -0.13
VARS-228ENST00000495010 PATE1Q8WXA2 126 aa14.23□□□□□ -0.13
VARS-228ENST00000495010 SLC45A3Q96JT2 553 aa14.23□□□□□ -0.13
VARS-228ENST00000495010 SLC38A3Q99624 504 aa14.23□□□□□ -0.13
VARS-228ENST00000495010 FRMD8Q9BZ67 464 aaPredicted RBP14.23□□□□□ -0.13
VARS-228ENST00000495010 DHX35Q9H5Z1 703 aaKnown RBP14.23□□□□□ -0.13
VARS-228ENST00000495010 GPATCH2LQ9NWQ4 482 aa14.23□□□□□ -0.13
VARS-228ENST00000495010 TLN1Q9Y490 2541 aaKnown RBP14.23□□□□□ -0.13
VARS-228ENST00000495010 ARHGEF17Q96PE2 2063 aaPredicted RBP14.22□□□□□ -0.13
VARS-228ENST00000495010 EIF3CLB5ME19 914 aaKnown RBP14.22□□□□□ -0.13
VARS-228ENST00000495010 NKX2-8O15522 239 aa14.22□□□□□ -0.13
VARS-228ENST00000495010 CPP00450 1065 aa14.22□□□□□ -0.13
VARS-228ENST00000495010 CR2P20023 1033 aa14.22□□□□□ -0.13
VARS-228ENST00000495010 ADCY8P40145 1251 aa14.22□□□□□ -0.13
VARS-228ENST00000495010 ETV3P41162 512 aa14.22□□□□□ -0.13
VARS-228ENST00000495010 KLK7P49862 253 aa14.22□□□□□ -0.13
VARS-228ENST00000495010 RPL7AP62424 266 aaKnown RBP14.22□□□□□ -0.13
VARS-228ENST00000495010 MC1RQ01726 317 aa14.22□□□□□ -0.13
VARS-228ENST00000495010 IL10RBQ08334 325 aa14.22□□□□□ -0.13
VARS-228ENST00000495010 SQSTM1Q13501 440 aa14.22□□□□□ -0.13
VARS-228ENST00000495010 ZNF235Q14590 738 aa14.22□□□□□ -0.13
VARS-228ENST00000495010 LBRQ14739 615 aaKnown RBP14.22□□□□□ -0.13
VARS-228ENST00000495010 CNGA3Q16281 694 aa14.22□□□□□ -0.13
VARS-228ENST00000495010 SNAP47Q5SQN1 464 aa14.22□□□□□ -0.13
VARS-228ENST00000495010 MON1BQ7L1V2 547 aa14.22□□□□□ -0.13
VARS-228ENST00000495010 OR10G6Q8NH81 332 aa14.22□□□□□ -0.13
VARS-228ENST00000495010 EIF3CQ99613 913 aaKnown RBP14.22□□□□□ -0.13
VARS-228ENST00000495010 TMEM9Q9P0T7 183 aa14.22□□□□□ -0.13
VARS-228ENST00000495010 DOPEY2Q9Y3R5 2298 aa14.22□□□□□ -0.13
VARS-228ENST00000495010 A8MU76 341 aa14.21□□□□□ -0.13
VARS-228ENST00000495010 DUX1O43812 170 aa14.21□□□□□ -0.13
VARS-228ENST00000495010 HEXIM1O94992 359 aaKnown RBP14.21□□□□□ -0.13
VARS-228ENST00000495010 FUCA1P04066 466 aa14.21□□□□□ -0.13
VARS-228ENST00000495010 IVLP07476 585 aa14.21□□□□□ -0.13
VARS-228ENST00000495010 ERCC2P18074 760 aa14.21□□□□□ -0.13
VARS-228ENST00000495010 CSF2RBP32927 897 aa14.21□□□□□ -0.13
VARS-228ENST00000495010 GPR1P46091 355 aa14.21□□□□□ -0.13
VARS-228ENST00000495010 POLD2P49005 469 aa14.21□□□□□ -0.13
VARS-228ENST00000495010 CDC20Q12834 499 aa14.21□□□□□ -0.13
VARS-228ENST00000495010 DEFB109BQ30KR1 87 aa14.21□□□□□ -0.13
VARS-228ENST00000495010 ERMARDQ5T6L9 678 aa14.21□□□□□ -0.13
VARS-228ENST00000495010 CEACAM20Q6UY09 585 aa14.21□□□□□ -0.13
VARS-228ENST00000495010 RFX8Q6ZV50 586 aa14.21□□□□□ -0.13
VARS-228ENST00000495010 BBS5Q8N3I7 341 aa14.21□□□□□ -0.13
VARS-228ENST00000495010 FAM26EQ8N5C1 309 aa14.21□□□□□ -0.13
VARS-228ENST00000495010 LZTR1Q8N653 840 aa14.21□□□□□ -0.13
VARS-228ENST00000495010 APOBEC4Q8WW27 367 aaKnown RBP14.21□□□□□ -0.13
VARS-228ENST00000495010 DTD2Q96FN9 168 aa14.21□□□□□ -0.13
VARS-228ENST00000495010 PSKH2Q96QS6 385 aa14.21□□□□□ -0.13
VARS-228ENST00000495010 OR2M4Q96R27 311 aa14.21□□□□□ -0.13
VARS-228ENST00000495010 ZPBPQ9BS86 351 aa14.21□□□□□ -0.13
VARS-228ENST00000495010 TRIT1Q9H3H1 467 aaKnown RBP14.21□□□□□ -0.13
VARS-228ENST00000495010 STN1Q9H668 368 aaKnown RBP14.21□□□□□ -0.13
VARS-228ENST00000495010 PILRAQ9UKJ1 303 aa14.21□□□□□ -0.13
VARS-228ENST00000495010 PHTF1Q9UMS5 762 aa14.21□□□□□ -0.13
VARS-228ENST00000495010 SLC17A4Q9Y2C5 497 aa14.21□□□□□ -0.13
VARS-228ENST00000495010 PCDHGC4Q9Y5F7 938 aa14.21□□□□□ -0.13
VARS-228ENST00000495010 TRBV23OR9-2A0A075B6M9 112 aa14.2□□□□□ -0.14
VARS-228ENST00000495010 TTC24A2A3L6 582 aaPredicted RBP14.2□□□□□ -0.14
VARS-228ENST00000495010 PSMD11O00231 422 aa14.2□□□□□ -0.14
VARS-228ENST00000495010 SOCS5O75159 536 aa14.2□□□□□ -0.14
VARS-228ENST00000495010 PSMA2P25787 234 aa14.2□□□□□ -0.14
VARS-228ENST00000495010 TEAD1P28347 426 aa14.2□□□□□ -0.14
VARS-228ENST00000495010 LACTB2Q53H82 288 aaPredicted RBP14.2□□□□□ -0.14
VARS-228ENST00000495010 PPP6R3Q5H9R7 873 aaPredicted RBP14.2□□□□□ -0.14
VARS-228ENST00000495010 TMCO4Q5TGY1 634 aa14.2□□□□□ -0.14
VARS-228ENST00000495010 C16orf46Q6P387 395 aa14.2□□□□□ -0.14
VARS-228ENST00000495010 ARHGAP36Q6ZRI8 547 aa14.2□□□□□ -0.14
VARS-228ENST00000495010 HSD11B1LQ7Z5J1 315 aa14.2□□□□□ -0.14
VARS-228ENST00000495010 ATCAYQ86WG3 371 aa14.2□□□□□ -0.14
VARS-228ENST00000495010 ARHGAP12Q8IWW6 846 aa14.2□□□□□ -0.14
VARS-228ENST00000495010 NEK11Q8NG66 645 aa14.2□□□□□ -0.14
VARS-228ENST00000495010 RTP4Q96DX8 246 aa14.2□□□□□ -0.14
VARS-228ENST00000495010 ABHD17AQ96GS6 310 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms