RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 SCAMP4Q969E2 229 aa9.59□□□□□ -0.87
MSH5-218ENST00000494646 DTD2Q96FN9 168 aa9.59□□□□□ -0.87
MSH5-218ENST00000494646 CCDC42Q96M95 316 aa9.59□□□□□ -0.87
MSH5-218ENST00000494646 ZNF578Q96N58 590 aaPredicted RBP9.59□□□□□ -0.87
MSH5-218ENST00000494646 GFM1Q96RP9 751 aaKnown RBP9.59□□□□□ -0.87
MSH5-218ENST00000494646 FOXP3Q9BZS1 431 aa9.59□□□□□ -0.87
MSH5-218ENST00000494646 POLR1EQ9GZS1 481 aaKnown RBP9.59□□□□□ -0.87
MSH5-218ENST00000494646 ABCG8Q9H221 673 aa9.59□□□□□ -0.87
MSH5-218ENST00000494646 TSPY26PQ9H489 355 aa9.59□□□□□ -0.87
MSH5-218ENST00000494646 WDR26Q9H7D7 661 aa9.59□□□□□ -0.87
MSH5-218ENST00000494646 NHEJ1Q9H9Q4 299 aaPredicted RBP9.59□□□□□ -0.87
MSH5-218ENST00000494646 CARS2Q9HA77 564 aaKnown RBP9.59□□□□□ -0.87
MSH5-218ENST00000494646 SPATS2LQ9NUQ6 558 aaKnown RBP9.59□□□□□ -0.87
MSH5-218ENST00000494646 ATXN7L1Q9ULK2 861 aaPredicted RBP9.59□□□□□ -0.87
MSH5-218ENST00000494646 TMEM98Q9Y2Y6 226 aa9.59□□□□□ -0.87
MSH5-218ENST00000494646 PLEKHM1Q9Y4G2 1056 aa9.59□□□□□ -0.87
MSH5-218ENST00000494646 HEY1Q9Y5J3 304 aa9.59□□□□□ -0.87
MSH5-218ENST00000494646 ATRXP46100 2492 aa9.59□□□□□ -0.87
MSH5-218ENST00000494646 ATMQ13315 3056 aa9.58□□□□□ -0.88
MSH5-218ENST00000494646 TRBV23OR9-2A0A075B6M9 112 aa9.58□□□□□ -0.88
MSH5-218ENST00000494646 A0A0J9YYE9 177 aa9.58□□□□□ -0.88
MSH5-218ENST00000494646 A0A1W2PQM1 296 aa9.58□□□□□ -0.88
MSH5-218ENST00000494646 SSU72P8A0A1W2PR75 194 aa9.58□□□□□ -0.88
MSH5-218ENST00000494646 PRSS38A1L453 326 aa9.58□□□□□ -0.88
MSH5-218ENST00000494646 NTN3O00634 580 aaPredicted RBP9.58□□□□□ -0.88
MSH5-218ENST00000494646 TNFRSF10CO14798 259 aa9.58□□□□□ -0.88
MSH5-218ENST00000494646 CLDN7O95471 211 aa9.58□□□□□ -0.88
MSH5-218ENST00000494646 TRBC1P01850 177 aa9.58□□□□□ -0.88
MSH5-218ENST00000494646 RPLP0P05388 317 aaKnown RBP9.58□□□□□ -0.88
MSH5-218ENST00000494646 HLA-DQB2P05538 268 aa9.58□□□□□ -0.88
MSH5-218ENST00000494646 CEACAM5P06731 702 aa9.58□□□□□ -0.88
MSH5-218ENST00000494646 KRT7P08729 469 aa9.58□□□□□ -0.88
MSH5-218ENST00000494646 TPM1P09493 284 aa9.58□□□□□ -0.88
MSH5-218ENST00000494646 TMEM253P0C7T8 217 aa9.58□□□□□ -0.88
MSH5-218ENST00000494646 CCNB1P14635 433 aa9.58□□□□□ -0.88
MSH5-218ENST00000494646 NFKBIAP25963 317 aa9.58□□□□□ -0.88
MSH5-218ENST00000494646 AK4P27144 223 aaPredicted RBP9.58□□□□□ -0.88
MSH5-218ENST00000494646 CXADRP78310 365 aa9.58□□□□□ -0.88
MSH5-218ENST00000494646 PTSQ03393 145 aa9.58□□□□□ -0.88
MSH5-218ENST00000494646 NIPAL4Q0D2K0 466 aa9.58□□□□□ -0.88
MSH5-218ENST00000494646 LLGL1Q15334 1064 aa9.58□□□□□ -0.88
MSH5-218ENST00000494646 RALGPS1Q5JS13 557 aa9.58□□□□□ -0.88
MSH5-218ENST00000494646 LRRC66Q68CR7 880 aa9.58□□□□□ -0.88
MSH5-218ENST00000494646 TIGD7Q6NT04 549 aaPredicted RBP9.58□□□□□ -0.88
MSH5-218ENST00000494646 OGFOD3Q6PK18 319 aa9.58□□□□□ -0.88
MSH5-218ENST00000494646 NPNTQ6UXI9 565 aa9.58□□□□□ -0.88
MSH5-218ENST00000494646 USP45Q70EL2 814 aa9.58□□□□□ -0.88
MSH5-218ENST00000494646 KDELC2Q7Z4H8 507 aa9.58□□□□□ -0.88
MSH5-218ENST00000494646 B3GNT8Q7Z7M8 397 aa9.58□□□□□ -0.88
MSH5-218ENST00000494646 HEATR4Q86WZ0 1026 aa9.58□□□□□ -0.88
MSH5-218ENST00000494646 NRROSQ86YC3 692 aa9.58□□□□□ -0.88
MSH5-218ENST00000494646 VSTM4Q8IW00 320 aa9.58□□□□□ -0.88
MSH5-218ENST00000494646 SPACA3Q8IXA5 215 aa9.58□□□□□ -0.88
MSH5-218ENST00000494646 PARP9Q8IXQ6 854 aa9.58□□□□□ -0.88
MSH5-218ENST00000494646 CCDC13Q8IYE1 715 aa9.58□□□□□ -0.88
MSH5-218ENST00000494646 NDUFAF2Q8N183 169 aa9.58□□□□□ -0.88
MSH5-218ENST00000494646 ZNF248Q8NDW4 579 aa9.58□□□□□ -0.88
MSH5-218ENST00000494646 GPR156Q8NFN8 814 aa9.58□□□□□ -0.88
MSH5-218ENST00000494646 ARRDC2Q8TBH0 407 aa9.58□□□□□ -0.88
MSH5-218ENST00000494646 MAML1Q92585 1016 aa9.58□□□□□ -0.88
MSH5-218ENST00000494646 AP2M1Q96CW1 435 aa9.58□□□□□ -0.88
MSH5-218ENST00000494646 PRR11Q96HE9 360 aaPredicted RBP9.58□□□□□ -0.88
MSH5-218ENST00000494646 SLC46A1Q96NT5 459 aa9.58□□□□□ -0.88
MSH5-218ENST00000494646 TSGA13Q96PP4 275 aa9.58□□□□□ -0.88
MSH5-218ENST00000494646 RNF157Q96PX1 679 aa9.58□□□□□ -0.88
MSH5-218ENST00000494646 AGAP2Q99490 1192 aa9.58□□□□□ -0.88
MSH5-218ENST00000494646 DNAJC7Q99615 494 aa9.58□□□□□ -0.88
MSH5-218ENST00000494646 ZNF670Q9BS34 389 aa9.58□□□□□ -0.88
MSH5-218ENST00000494646 MAK16Q9BXY0 300 aaKnown RBP9.58□□□□□ -0.88
MSH5-218ENST00000494646 TEX101Q9BY14 249 aa9.58□□□□□ -0.88
MSH5-218ENST00000494646 CEP41Q9BYV8 373 aa9.58□□□□□ -0.88
MSH5-218ENST00000494646 LRRN3Q9H3W5 708 aa9.58□□□□□ -0.88
MSH5-218ENST00000494646 PRORYQ9H606 182 aa9.58□□□□□ -0.88
MSH5-218ENST00000494646 EPB41L5Q9HCM4 733 aa9.58□□□□□ -0.88
MSH5-218ENST00000494646 ASCL3Q9NQ33 180 aa9.58□□□□□ -0.88
MSH5-218ENST00000494646 PHPT1Q9NRX4 125 aaPredicted RBP9.58□□□□□ -0.88
MSH5-218ENST00000494646 ABHD10Q9NUJ1 306 aa9.58□□□□□ -0.88
MSH5-218ENST00000494646 DTLQ9NZJ0 730 aa9.58□□□□□ -0.88
MSH5-218ENST00000494646 LRIT1Q9P2V4 623 aa9.58□□□□□ -0.88
MSH5-218ENST00000494646 SUFUQ9UMX1 484 aa9.58□□□□□ -0.88
MSH5-218ENST00000494646 PPIL1Q9Y3C6 166 aa9.58□□□□□ -0.88
MSH5-218ENST00000494646 HYOU1Q9Y4L1 999 aa9.58□□□□□ -0.88
MSH5-218ENST00000494646 RNF215Q9Y6U7 377 aa9.58□□□□□ -0.88
MSH5-218ENST00000494646 SCN8AQ9UQD0 1980 aa9.57□□□□□ -0.88
MSH5-218ENST00000494646 LRRD1A4D1F6 860 aa9.57□□□□□ -0.88
MSH5-218ENST00000494646 KCNK1O00180 336 aa9.57□□□□□ -0.88
MSH5-218ENST00000494646 PSMD11O00231 422 aa9.57□□□□□ -0.88
MSH5-218ENST00000494646 INPP4BO15327 924 aa9.57□□□□□ -0.88
MSH5-218ENST00000494646 KLK10O43240 276 aa9.57□□□□□ -0.88
MSH5-218ENST00000494646 NOBOXO60393 691 aa9.57□□□□□ -0.88
MSH5-218ENST00000494646 TCEA3O75764 348 aa9.57□□□□□ -0.88
MSH5-218ENST00000494646 TNFSF15O95150 251 aa9.57□□□□□ -0.88
MSH5-218ENST00000494646 ASMTLO95671 621 aa9.57□□□□□ -0.88
MSH5-218ENST00000494646 PRLP01236 227 aa9.57□□□□□ -0.88
MSH5-218ENST00000494646 FGF1P05230 155 aa9.57□□□□□ -0.88
MSH5-218ENST00000494646 MYCLP1P12525 358 aaPredicted RBP9.57□□□□□ -0.88
MSH5-218ENST00000494646 HGFP14210 728 aa9.57□□□□□ -0.88
MSH5-218ENST00000494646 CD86P42081 329 aa9.57□□□□□ -0.88
MSH5-218ENST00000494646 PCBP4P57723 403 aaKnown RBP9.57□□□□□ -0.88
MSH5-218ENST00000494646 CDK3Q00526 305 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms