RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 TXNDC5Q8NBS9 432 aaKnown RBP16.51■□□□□ 0.23
ATG4B-225ENST00000494465 SREK1Q8WXA9 508 aaKnown RBP16.51■□□□□ 0.23
ATG4B-225ENST00000494465 ING5Q8WYH8 240 aa16.51■□□□□ 0.23
ATG4B-225ENST00000494465 BBS2Q9BXC9 721 aa16.51■□□□□ 0.23
ATG4B-225ENST00000494465 DRC3Q9H069 523 aa16.51■□□□□ 0.23
ATG4B-225ENST00000494465 RASSF4Q9H2L5 321 aa16.51■□□□□ 0.23
ATG4B-225ENST00000494465 SAR1AQ9NR31 198 aa16.51■□□□□ 0.23
ATG4B-225ENST00000494465 ARHGEF3Q9NR81 526 aa16.51■□□□□ 0.23
ATG4B-225ENST00000494465 HAO1Q9UJM8 370 aa16.51■□□□□ 0.23
ATG4B-225ENST00000494465 STX7O15400 261 aaKnown RBP16.51■□□□□ 0.23
ATG4B-225ENST00000494465 SOCS5O75159 536 aa16.51■□□□□ 0.23
ATG4B-225ENST00000494465 CHRNGP07510 517 aa16.51■□□□□ 0.23
ATG4B-225ENST00000494465 TCF3P15923 654 aa16.51■□□□□ 0.23
ATG4B-225ENST00000494465 MC4RP32245 332 aa16.51■□□□□ 0.23
ATG4B-225ENST00000494465 SLC26A3P40879 764 aa16.51■□□□□ 0.23
ATG4B-225ENST00000494465 MAPK8P45983 427 aa16.51■□□□□ 0.23
ATG4B-225ENST00000494465 CCR10P46092 362 aa16.51■□□□□ 0.23
ATG4B-225ENST00000494465 EPHB1P54762 984 aa16.51■□□□□ 0.23
ATG4B-225ENST00000494465 NAGLUP54802 743 aa16.51■□□□□ 0.23
ATG4B-225ENST00000494465 RPL26P61254 145 aaKnown RBP16.51■□□□□ 0.23
ATG4B-225ENST00000494465 XIAPP98170 497 aa16.51■□□□□ 0.23
ATG4B-225ENST00000494465 ZBTB16Q05516 673 aa16.51■□□□□ 0.23
ATG4B-225ENST00000494465 BCL2L1Q07817 233 aa16.51■□□□□ 0.23
ATG4B-225ENST00000494465 CBX2Q14781 532 aaPredicted RBP16.51■□□□□ 0.23
ATG4B-225ENST00000494465 FBXW10Q5XX13 1052 aa16.51■□□□□ 0.23
ATG4B-225ENST00000494465 PDE12Q6L8Q7 609 aaKnown RBP16.51■□□□□ 0.23
ATG4B-225ENST00000494465 LYSMD3Q7Z3D4 306 aa16.51■□□□□ 0.23
ATG4B-225ENST00000494465 ZSWIM9Q86XI8 627 aa16.51■□□□□ 0.23
ATG4B-225ENST00000494465 KIF2BQ8N4N8 673 aa16.51■□□□□ 0.23
ATG4B-225ENST00000494465 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.51■□□□□ 0.23
ATG4B-225ENST00000494465 OR2AP1Q8NGE2 309 aa16.51■□□□□ 0.23
ATG4B-225ENST00000494465 KLHL29Q96CT2 875 aa16.51■□□□□ 0.23
ATG4B-225ENST00000494465 SLC7A6OSQ96CW6 309 aaPredicted RBP16.51■□□□□ 0.23
ATG4B-225ENST00000494465 TCF12Q99081 682 aa16.51■□□□□ 0.23
ATG4B-225ENST00000494465 RPL26L1Q9UNX3 145 aaKnown RBP16.51■□□□□ 0.23
ATG4B-225ENST00000494465 C2orf16Q68DN1 1984 aa16.5■□□□□ 0.23
ATG4B-225ENST00000494465 CFAP73A6NFT4 308 aa16.5■□□□□ 0.23
ATG4B-225ENST00000494465 ATP5HO75947 161 aa16.5■□□□□ 0.23
ATG4B-225ENST00000494465 HSPA4LO95757 839 aa16.5■□□□□ 0.23
ATG4B-225ENST00000494465 IGSF6O95976 241 aa16.5■□□□□ 0.23
ATG4B-225ENST00000494465 TYRP14679 529 aa16.5■□□□□ 0.23
ATG4B-225ENST00000494465 HOXB8P17481 243 aaPredicted RBP16.5■□□□□ 0.23
ATG4B-225ENST00000494465 HMGCLP35914 325 aa16.5■□□□□ 0.23
ATG4B-225ENST00000494465 KPNA2P52292 529 aaKnown RBP16.5■□□□□ 0.23
ATG4B-225ENST00000494465 ERVK-21P61565 698 aa16.5■□□□□ 0.23
ATG4B-225ENST00000494465 PFKPQ01813 784 aa16.5■□□□□ 0.23
ATG4B-225ENST00000494465 GPM6BQ13491 265 aa16.5■□□□□ 0.23
ATG4B-225ENST00000494465 SETMARQ53H47 684 aaPredicted RBP16.5■□□□□ 0.23
ATG4B-225ENST00000494465 ADGRG2Q8IZP9 1017 aa16.5■□□□□ 0.23
ATG4B-225ENST00000494465 ISG20Q96AZ6 181 aaKnown RBP16.5■□□□□ 0.23
ATG4B-225ENST00000494465 SGF29Q96ES7 293 aa16.5■□□□□ 0.23
ATG4B-225ENST00000494465 TMEM237Q96Q45 408 aa16.5■□□□□ 0.23
ATG4B-225ENST00000494465 ARL8BQ9NVJ2 186 aa16.5■□□□□ 0.23
ATG4B-225ENST00000494465 WNT6Q9Y6F9 365 aa16.5■□□□□ 0.23
ATG4B-225ENST00000494465 A0A0J9YYE9 177 aa16.5■□□□□ 0.23
ATG4B-225ENST00000494465 NEMP2A6NFY4 417 aa16.5■□□□□ 0.23
ATG4B-225ENST00000494465 TRBC1P01850 177 aa16.5■□□□□ 0.23
ATG4B-225ENST00000494465 KCNA5P22460 613 aa16.5■□□□□ 0.23
ATG4B-225ENST00000494465 ACAP2Q15057 778 aa16.5■□□□□ 0.23
ATG4B-225ENST00000494465 CDKN3Q16667 212 aa16.5■□□□□ 0.23
ATG4B-225ENST00000494465 LY6G5CQ5SRR4 150 aa16.5■□□□□ 0.23
ATG4B-225ENST00000494465 ISCA2Q86U28 154 aa16.5■□□□□ 0.23
ATG4B-225ENST00000494465 LSMEM2Q8N112 164 aa16.5■□□□□ 0.23
ATG4B-225ENST00000494465 ITFG1Q8TB96 612 aa16.5■□□□□ 0.23
ATG4B-225ENST00000494465 BIRC8Q96P09 236 aa16.5■□□□□ 0.23
ATG4B-225ENST00000494465 LRRC3BQ96PB8 259 aa16.5■□□□□ 0.23
ATG4B-225ENST00000494465 FAM96AQ9H5X1 160 aa16.5■□□□□ 0.23
ATG4B-225ENST00000494465 STN1Q9H668 368 aaKnown RBP16.5■□□□□ 0.23
ATG4B-225ENST00000494465 POPDC3Q9HBV1 291 aa16.5■□□□□ 0.23
ATG4B-225ENST00000494465 TBC1D14Q9P2M4 693 aa16.5■□□□□ 0.23
ATG4B-225ENST00000494465 PABPC1P11940 636 aaKnown RBP16.49■□□□□ 0.23
ATG4B-225ENST00000494465 NQO1P15559 274 aaKnown RBP16.49■□□□□ 0.23
ATG4B-225ENST00000494465 ZNF37AP17032 561 aaPredicted RBP16.49■□□□□ 0.23
ATG4B-225ENST00000494465 KCNC1P48547 511 aa16.49■□□□□ 0.23
ATG4B-225ENST00000494465 DNAJB13P59910 316 aa16.49■□□□□ 0.23
ATG4B-225ENST00000494465 RCN2Q14257 317 aa16.49■□□□□ 0.23
ATG4B-225ENST00000494465 C22orf39Q6P5X5 142 aa16.49■□□□□ 0.23
ATG4B-225ENST00000494465 ADIPOR2Q86V24 386 aa16.49■□□□□ 0.23
ATG4B-225ENST00000494465 PTCD3Q96EY7 689 aaKnown RBP16.49■□□□□ 0.23
ATG4B-225ENST00000494465 CDH19Q9H159 772 aa16.49■□□□□ 0.23
ATG4B-225ENST00000494465 LRMDAQ9H2I8 198 aa16.49■□□□□ 0.23
ATG4B-225ENST00000494465 ATP13A3Q9H7F0 1226 aa16.49■□□□□ 0.23
ATG4B-225ENST00000494465 ARMCX1Q9P291 453 aa16.49■□□□□ 0.23
ATG4B-225ENST00000494465 YBX2Q9Y2T7 364 aaKnown RBP16.49■□□□□ 0.23
ATG4B-225ENST00000494465 CAPN14A8MX76 684 aa16.49■□□□□ 0.23
ATG4B-225ENST00000494465 ZNF197O14709 1029 aa16.49■□□□□ 0.23
ATG4B-225ENST00000494465 GPR39O43194 453 aa16.49■□□□□ 0.23
ATG4B-225ENST00000494465 ATP5F1P24539 256 aaPredicted RBP16.49■□□□□ 0.23
ATG4B-225ENST00000494465 IDH3AP50213 366 aa16.49■□□□□ 0.23
ATG4B-225ENST00000494465 ARL13AQ5H913 290 aaPredicted RBP16.49■□□□□ 0.23
ATG4B-225ENST00000494465 PTERQ96BW5 349 aa16.49■□□□□ 0.23
ATG4B-225ENST00000494465 SAMD11Q96NU1 681 aa16.49■□□□□ 0.23
ATG4B-225ENST00000494465 GPR63Q9BZJ6 419 aa16.49■□□□□ 0.23
ATG4B-225ENST00000494465 DNAJC28Q9NX36 388 aa16.49■□□□□ 0.23
ATG4B-225ENST00000494465 MARK1Q9P0L2 795 aa16.49■□□□□ 0.23
ATG4B-225ENST00000494465 ZMYM5Q9UJ78 669 aa16.49■□□□□ 0.23
ATG4B-225ENST00000494465 UBA6A0AVT1 1052 aaPredicted RBP16.48■□□□□ 0.23
ATG4B-225ENST00000494465 GAPDHSO14556 408 aaPredicted RBP16.48■□□□□ 0.23
ATG4B-225ENST00000494465 TRIM24O15164 1050 aa16.48■□□□□ 0.23
ATG4B-225ENST00000494465 NDUFS3O75489 264 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms