RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 PTSQ03393 145 aa8.53□□□□□ -1.04
LRCH3-219ENST00000494069 CCDC173Q0VFZ6 552 aa8.53□□□□□ -1.04
LRCH3-219ENST00000494069 ZBTB17Q13105 803 aa8.53□□□□□ -1.04
LRCH3-219ENST00000494069 TBX2Q13207 712 aaPredicted RBP8.53□□□□□ -1.04
LRCH3-219ENST00000494069 TRIM14Q14142 442 aa8.53□□□□□ -1.04
LRCH3-219ENST00000494069 PDK2Q15119 407 aa8.53□□□□□ -1.04
LRCH3-219ENST00000494069 LLGL1Q15334 1064 aa8.53□□□□□ -1.04
LRCH3-219ENST00000494069 TBC1D25Q3MII6 688 aa8.53□□□□□ -1.04
LRCH3-219ENST00000494069 C3orf38Q5JPI3 329 aa8.53□□□□□ -1.04
LRCH3-219ENST00000494069 ZFYVE27Q5T4F4 411 aa8.53□□□□□ -1.04
LRCH3-219ENST00000494069 LRRC66Q68CR7 880 aa8.53□□□□□ -1.04
LRCH3-219ENST00000494069 TAF8Q7Z7C8 310 aa8.53□□□□□ -1.04
LRCH3-219ENST00000494069 B3GNT8Q7Z7M8 397 aa8.53□□□□□ -1.04
LRCH3-219ENST00000494069 TRIM74Q86UV6 250 aa8.53□□□□□ -1.04
LRCH3-219ENST00000494069 GKN2Q86XP6 184 aa8.53□□□□□ -1.04
LRCH3-219ENST00000494069 NRROSQ86YC3 692 aa8.53□□□□□ -1.04
LRCH3-219ENST00000494069 SDR16C5Q8N3Y7 309 aa8.53□□□□□ -1.04
LRCH3-219ENST00000494069 PLD5Q8N7P1 536 aa8.53□□□□□ -1.04
LRCH3-219ENST00000494069 CNTD1Q8N815 330 aa8.53□□□□□ -1.04
LRCH3-219ENST00000494069 ARL10Q8N8L6 244 aa8.53□□□□□ -1.04
LRCH3-219ENST00000494069 CCNYQ8ND76 341 aa8.53□□□□□ -1.04
LRCH3-219ENST00000494069 SNIP1Q8TAD8 396 aaKnown RBP8.53□□□□□ -1.04
LRCH3-219ENST00000494069 FGF11Q92914 225 aa8.53□□□□□ -1.04
LRCH3-219ENST00000494069 GLMNQ92990 594 aa8.53□□□□□ -1.04
LRCH3-219ENST00000494069 SCAMP4Q969E2 229 aa8.53□□□□□ -1.04
LRCH3-219ENST00000494069 DTD2Q96FN9 168 aa8.53□□□□□ -1.04
LRCH3-219ENST00000494069 PRR11Q96HE9 360 aaPredicted RBP8.53□□□□□ -1.04
LRCH3-219ENST00000494069 CCDC42Q96M95 316 aa8.53□□□□□ -1.04
LRCH3-219ENST00000494069 BBC3Q96PG8 261 aaPredicted RBP8.53□□□□□ -1.04
LRCH3-219ENST00000494069 TSGA13Q96PP4 275 aa8.53□□□□□ -1.04
LRCH3-219ENST00000494069 RNF157Q96PX1 679 aa8.53□□□□□ -1.04
LRCH3-219ENST00000494069 AGAP2Q99490 1192 aa8.53□□□□□ -1.04
LRCH3-219ENST00000494069 TEX101Q9BY14 249 aa8.53□□□□□ -1.04
LRCH3-219ENST00000494069 CEP41Q9BYV8 373 aa8.53□□□□□ -1.04
LRCH3-219ENST00000494069 POLR1EQ9GZS1 481 aaKnown RBP8.53□□□□□ -1.04
LRCH3-219ENST00000494069 ABCG8Q9H221 673 aa8.53□□□□□ -1.04
LRCH3-219ENST00000494069 WDR26Q9H7D7 661 aa8.53□□□□□ -1.04
LRCH3-219ENST00000494069 SPATS2LQ9NUQ6 558 aaKnown RBP8.53□□□□□ -1.04
LRCH3-219ENST00000494069 EVA1BQ9NVM1 165 aa8.53□□□□□ -1.04
LRCH3-219ENST00000494069 ZNHIT6Q9NWK9 470 aaKnown RBP8.53□□□□□ -1.04
LRCH3-219ENST00000494069 GOLGA6AQ9NYA3 693 aa8.53□□□□□ -1.04
LRCH3-219ENST00000494069 NCKIPSDQ9NZQ3 722 aa8.53□□□□□ -1.04
LRCH3-219ENST00000494069 SATB2Q9UPW6 733 aa8.53□□□□□ -1.04
LRCH3-219ENST00000494069 PPIL1Q9Y3C6 166 aa8.53□□□□□ -1.04
LRCH3-219ENST00000494069 PLEKHM1Q9Y4G2 1056 aa8.53□□□□□ -1.04
LRCH3-219ENST00000494069 ST14Q9Y5Y6 855 aa8.53□□□□□ -1.04
LRCH3-219ENST00000494069 A0A0J9YYE9 177 aa8.52□□□□□ -1.05
LRCH3-219ENST00000494069 A0A1W2PQ67 120 aa8.52□□□□□ -1.05
LRCH3-219ENST00000494069 A0A1W2PQM1 296 aa8.52□□□□□ -1.05
LRCH3-219ENST00000494069 B4DGG1 531 aa8.52□□□□□ -1.05
LRCH3-219ENST00000494069 NTN3O00634 580 aaPredicted RBP8.52□□□□□ -1.05
LRCH3-219ENST00000494069 TRBC1P01850 177 aa8.52□□□□□ -1.05
LRCH3-219ENST00000494069 MMP2P08253 660 aa8.52□□□□□ -1.05
LRCH3-219ENST00000494069 CYP2A6P11509 494 aaPredicted RBP8.52□□□□□ -1.05
LRCH3-219ENST00000494069 MYCLP1P12525 358 aaPredicted RBP8.52□□□□□ -1.05
LRCH3-219ENST00000494069 AK4P27144 223 aaPredicted RBP8.52□□□□□ -1.05
LRCH3-219ENST00000494069 ABCG1P45844 678 aa8.52□□□□□ -1.05
LRCH3-219ENST00000494069 GNPDA1P46926 289 aa8.52□□□□□ -1.05
LRCH3-219ENST00000494069 LSSP48449 732 aa8.52□□□□□ -1.05
LRCH3-219ENST00000494069 MAZP56270 477 aaKnown RBP8.52□□□□□ -1.05
LRCH3-219ENST00000494069 DYNLT1P63172 113 aa8.52□□□□□ -1.05
LRCH3-219ENST00000494069 CDK3Q00526 305 aa8.52□□□□□ -1.05
LRCH3-219ENST00000494069 ARHGEF7Q14155 803 aa8.52□□□□□ -1.05
LRCH3-219ENST00000494069 IFI16Q16666 785 aaKnown RBP8.52□□□□□ -1.05
LRCH3-219ENST00000494069 KIF26BQ2KJY2 2108 aa8.52□□□□□ -1.05
LRCH3-219ENST00000494069 SOWAHCQ53LP3 525 aaPredicted RBP8.52□□□□□ -1.05
LRCH3-219ENST00000494069 RALGPS1Q5JS13 557 aa8.52□□□□□ -1.05
LRCH3-219ENST00000494069 ALG1LQ6GMV1 187 aa8.52□□□□□ -1.05
LRCH3-219ENST00000494069 RAET1GQ6H3X3 334 aa8.52□□□□□ -1.05
LRCH3-219ENST00000494069 TIGD7Q6NT04 549 aaPredicted RBP8.52□□□□□ -1.05
LRCH3-219ENST00000494069 FOXR1Q6PIV2 292 aa8.52□□□□□ -1.05
LRCH3-219ENST00000494069 OGFOD3Q6PK18 319 aa8.52□□□□□ -1.05
LRCH3-219ENST00000494069 DOK6Q6PKX4 331 aa8.52□□□□□ -1.05
LRCH3-219ENST00000494069 LVRNQ6Q4G3 990 aa8.52□□□□□ -1.05
LRCH3-219ENST00000494069 RBM44Q6ZP01 1051 aaKnown RBP8.52□□□□□ -1.05
LRCH3-219ENST00000494069 USP45Q70EL2 814 aa8.52□□□□□ -1.05
LRCH3-219ENST00000494069 LRRC49Q8IUZ0 686 aa8.52□□□□□ -1.05
LRCH3-219ENST00000494069 MAP7D3Q8IWC1 876 aa8.52□□□□□ -1.05
LRCH3-219ENST00000494069 CCDC13Q8IYE1 715 aa8.52□□□□□ -1.05
LRCH3-219ENST00000494069 Q8N9G6 341 aaPredicted RBP8.52□□□□□ -1.05
LRCH3-219ENST00000494069 FAM46DQ8NEK8 389 aa8.52□□□□□ -1.05
LRCH3-219ENST00000494069 LPCAT1Q8NF37 534 aa8.52□□□□□ -1.05
LRCH3-219ENST00000494069 GPR156Q8NFN8 814 aa8.52□□□□□ -1.05
LRCH3-219ENST00000494069 ATL2Q8NHH9 583 aa8.52□□□□□ -1.05
LRCH3-219ENST00000494069 TPCN2Q8NHX9 752 aa8.52□□□□□ -1.05
LRCH3-219ENST00000494069 SCG3Q8WXD2 468 aaKnown RBP8.52□□□□□ -1.05
LRCH3-219ENST00000494069 NAT6Q93015 286 aa8.52□□□□□ -1.05
LRCH3-219ENST00000494069 FATE1Q969F0 183 aa8.52□□□□□ -1.05
LRCH3-219ENST00000494069 HDAC11Q96DB2 347 aa8.52□□□□□ -1.05
LRCH3-219ENST00000494069 TDRD1Q9BXT4 1180 aaKnown RBP8.52□□□□□ -1.05
LRCH3-219ENST00000494069 FRMD8Q9BZ67 464 aaPredicted RBP8.52□□□□□ -1.05
LRCH3-219ENST00000494069 FOXP3Q9BZS1 431 aa8.52□□□□□ -1.05
LRCH3-219ENST00000494069 BRD8Q9H0E9 1235 aa8.52□□□□□ -1.05
LRCH3-219ENST00000494069 GOLPH3Q9H4A6 298 aa8.52□□□□□ -1.05
LRCH3-219ENST00000494069 DPEP2Q9H4A9 486 aa8.52□□□□□ -1.05
LRCH3-219ENST00000494069 POLR1BQ9H9Y6 1135 aa8.52□□□□□ -1.05
LRCH3-219ENST00000494069 CARS2Q9HA77 564 aaKnown RBP8.52□□□□□ -1.05
LRCH3-219ENST00000494069 ASCL3Q9NQ33 180 aa8.52□□□□□ -1.05
LRCH3-219ENST00000494069 ATXN7L1Q9ULK2 861 aaPredicted RBP8.52□□□□□ -1.05
LRCH3-219ENST00000494069 TMEM98Q9Y2Y6 226 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms