RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 BPTFQ12830 3046 aa14.09□□□□□ -0.15
PDZRN3-210ENST00000492909 NPIPB15A6NHN6 443 aaPredicted RBP14.09□□□□□ -0.15
PDZRN3-210ENST00000492909 KPNA3O00505 521 aaPredicted RBP14.09□□□□□ -0.15
PDZRN3-210ENST00000492909 CCL22O00626 93 aa14.09□□□□□ -0.15
PDZRN3-210ENST00000492909 PSMA3P25788 255 aa14.09□□□□□ -0.15
PDZRN3-210ENST00000492909 CNTFP26441 200 aa14.09□□□□□ -0.15
PDZRN3-210ENST00000492909 TIE1P35590 1138 aa14.09□□□□□ -0.15
PDZRN3-210ENST00000492909 GP5P40197 560 aa14.09□□□□□ -0.15
PDZRN3-210ENST00000492909 HADHAP40939 763 aa14.09□□□□□ -0.15
PDZRN3-210ENST00000492909 TPRG1Q6ZUI0 275 aa14.09□□□□□ -0.15
PDZRN3-210ENST00000492909 LMNTD2Q8IXW0 634 aa14.09□□□□□ -0.15
PDZRN3-210ENST00000492909 KCNV2Q8TDN2 545 aa14.09□□□□□ -0.15
PDZRN3-210ENST00000492909 CDKN2AIPNLQ96HQ2 116 aa14.09□□□□□ -0.15
PDZRN3-210ENST00000492909 C19orf43Q9BQ61 176 aa14.09□□□□□ -0.15
PDZRN3-210ENST00000492909 MFSD1Q9H3U5 465 aa14.09□□□□□ -0.15
PDZRN3-210ENST00000492909 PRSS16Q9NQE7 514 aa14.09□□□□□ -0.15
PDZRN3-210ENST00000492909 GGT7Q9UJ14 662 aa14.09□□□□□ -0.15
PDZRN3-210ENST00000492909 PPM1HQ9ULR3 514 aa14.09□□□□□ -0.15
PDZRN3-210ENST00000492909 A0A0U1RQS6 177 aa14.08□□□□□ -0.16
PDZRN3-210ENST00000492909 UPK3BL1B0FP48 263 aa14.08□□□□□ -0.16
PDZRN3-210ENST00000492909 UPK3BL2E5RIL1 263 aa14.08□□□□□ -0.16
PDZRN3-210ENST00000492909 CLDN7O95471 211 aa14.08□□□□□ -0.16
PDZRN3-210ENST00000492909 EGFP01133 1207 aa14.08□□□□□ -0.16
PDZRN3-210ENST00000492909 SNRPAP09012 282 aaKnown RBP14.08□□□□□ -0.16
PDZRN3-210ENST00000492909 XPAP23025 273 aaPredicted RBP14.08□□□□□ -0.16
PDZRN3-210ENST00000492909 LACTB2Q53H82 288 aaPredicted RBP14.08□□□□□ -0.16
PDZRN3-210ENST00000492909 GRTP1Q5TC63 336 aa14.08□□□□□ -0.16
PDZRN3-210ENST00000492909 ZNF470Q6ECI4 717 aa14.08□□□□□ -0.16
PDZRN3-210ENST00000492909 FSTL4Q6MZW2 842 aa14.08□□□□□ -0.16
PDZRN3-210ENST00000492909 PTAR1Q7Z6K3 402 aaPredicted RBP14.08□□□□□ -0.16
PDZRN3-210ENST00000492909 STRA8Q7Z7C7 330 aa14.08□□□□□ -0.16
PDZRN3-210ENST00000492909 TRABD2AQ86V40 505 aa14.08□□□□□ -0.16
PDZRN3-210ENST00000492909 EXOC3L1Q86VI1 746 aa14.08□□□□□ -0.16
PDZRN3-210ENST00000492909 PIP4K2CQ8TBX8 421 aa14.08□□□□□ -0.16
PDZRN3-210ENST00000492909 PPP1R16AQ96I34 528 aa14.08□□□□□ -0.16
PDZRN3-210ENST00000492909 FAM129BQ96TA1 746 aa14.08□□□□□ -0.16
PDZRN3-210ENST00000492909 COL25A1Q9BXS0 654 aaPredicted RBP14.08□□□□□ -0.16
PDZRN3-210ENST00000492909 SUDS3Q9H7L9 328 aaPredicted RBP14.08□□□□□ -0.16
PDZRN3-210ENST00000492909 INTS9Q9NV88 658 aaKnown RBP14.08□□□□□ -0.16
PDZRN3-210ENST00000492909 IL17CQ9P0M4 197 aa14.08□□□□□ -0.16
PDZRN3-210ENST00000492909 SENP1Q9P0U3 644 aa14.08□□□□□ -0.16
PDZRN3-210ENST00000492909 SARDHQ9UL12 918 aa14.08□□□□□ -0.16
PDZRN3-210ENST00000492909 ZNF106Q9H2Y7 1883 aaKnown RBP14.07□□□□□ -0.16
PDZRN3-210ENST00000492909 CCDC162PA2VCL2 907 aa14.07□□□□□ -0.16
PDZRN3-210ENST00000492909 C16orf96A6NNT2 1141 aa14.07□□□□□ -0.16
PDZRN3-210ENST00000492909 FOXO6A8MYZ6 492 aa14.07□□□□□ -0.16
PDZRN3-210ENST00000492909 GOT2P00505 430 aaKnown RBP14.07□□□□□ -0.16
PDZRN3-210ENST00000492909 IL1BP01584 269 aa14.07□□□□□ -0.16
PDZRN3-210ENST00000492909 CYP2A6P11509 494 aaPredicted RBP14.07□□□□□ -0.16
PDZRN3-210ENST00000492909 ITGB7P26010 798 aa14.07□□□□□ -0.16
PDZRN3-210ENST00000492909 WASP42768 502 aa14.07□□□□□ -0.16
PDZRN3-210ENST00000492909 CDKN3Q16667 212 aa14.07□□□□□ -0.16
PDZRN3-210ENST00000492909 POM121L1PQ3SYA9 428 aa14.07□□□□□ -0.16
PDZRN3-210ENST00000492909 C2orf27AQ580R0 203 aa14.07□□□□□ -0.16
PDZRN3-210ENST00000492909 IER5LQ5T953 404 aa14.07□□□□□ -0.16
PDZRN3-210ENST00000492909 FBXW10Q5XX13 1052 aa14.07□□□□□ -0.16
PDZRN3-210ENST00000492909 SDE2Q6IQ49 451 aa14.07□□□□□ -0.16
PDZRN3-210ENST00000492909 AFTPHQ6ULP2 937 aa14.07□□□□□ -0.16
PDZRN3-210ENST00000492909 CRTC1Q6UUV9 634 aa14.07□□□□□ -0.16
PDZRN3-210ENST00000492909 KIAA0408Q6ZU52 694 aa14.07□□□□□ -0.16
PDZRN3-210ENST00000492909 TTC7BQ86TV6 843 aa14.07□□□□□ -0.16
PDZRN3-210ENST00000492909 DENND6AQ8IWF6 608 aa14.07□□□□□ -0.16
PDZRN3-210ENST00000492909 SRRM1Q8IYB3 904 aaKnown RBP14.07□□□□□ -0.16
PDZRN3-210ENST00000492909 OR4L1Q8NH43 312 aa14.07□□□□□ -0.16
PDZRN3-210ENST00000492909 EID2BQ96D98 161 aa14.07□□□□□ -0.16
PDZRN3-210ENST00000492909 MTBPQ96DY7 904 aa14.07□□□□□ -0.16
PDZRN3-210ENST00000492909 RBBP8Q99708 897 aa14.07□□□□□ -0.16
PDZRN3-210ENST00000492909 BPIFA1Q9NP55 256 aa14.07□□□□□ -0.16
PDZRN3-210ENST00000492909 B4GALT6Q9UBX8 382 aa14.07□□□□□ -0.16
PDZRN3-210ENST00000492909 FBXO5Q9UKT4 447 aa14.07□□□□□ -0.16
PDZRN3-210ENST00000492909 ACTL7BQ9Y614 415 aa14.07□□□□□ -0.16
PDZRN3-210ENST00000492909 A8MX80 341 aa14.06□□□□□ -0.16
PDZRN3-210ENST00000492909 TRIM49D1C9J1S8 452 aa14.06□□□□□ -0.16
PDZRN3-210ENST00000492909 C1QTNF3-AMACRE9PGA6 284 aa14.06□□□□□ -0.16
PDZRN3-210ENST00000492909 H0YHG0 523 aa14.06□□□□□ -0.16
PDZRN3-210ENST00000492909 H7C0S8 307 aa14.06□□□□□ -0.16
PDZRN3-210ENST00000492909 SYNCRIPO60506 623 aaKnown RBP14.06□□□□□ -0.16
PDZRN3-210ENST00000492909 TIMP2P16035 220 aa14.06□□□□□ -0.16
PDZRN3-210ENST00000492909 NTSR1P30989 418 aa14.06□□□□□ -0.16
PDZRN3-210ENST00000492909 HNRNPH1P31943 449 aaKnown RBP14.06□□□□□ -0.16
PDZRN3-210ENST00000492909 SPRP35270 261 aaPredicted RBP14.06□□□□□ -0.16
PDZRN3-210ENST00000492909 SLC1A2P43004 574 aa14.06□□□□□ -0.16
PDZRN3-210ENST00000492909 CSE1LP55060 971 aaKnown RBP14.06□□□□□ -0.16
PDZRN3-210ENST00000492909 CTBP1Q13363 440 aa14.06□□□□□ -0.16
PDZRN3-210ENST00000492909 CAMK2GQ13555 558 aaPredicted RBP14.06□□□□□ -0.16
PDZRN3-210ENST00000492909 SLC44A4Q53GD3 710 aa14.06□□□□□ -0.16
PDZRN3-210ENST00000492909 LRRC73Q5JTD7 316 aa14.06□□□□□ -0.16
PDZRN3-210ENST00000492909 LRRC66Q68CR7 880 aa14.06□□□□□ -0.16
PDZRN3-210ENST00000492909 MRNIPQ6NTE8 343 aa14.06□□□□□ -0.16
PDZRN3-210ENST00000492909 PARS2Q7L3T8 475 aaKnown RBP14.06□□□□□ -0.16
PDZRN3-210ENST00000492909 TRMT11Q7Z4G4 463 aaKnown RBP14.06□□□□□ -0.16
PDZRN3-210ENST00000492909 TSPAN33Q86UF1 283 aa14.06□□□□□ -0.16
PDZRN3-210ENST00000492909 MMAAQ8IVH4 418 aaKnown RBP14.06□□□□□ -0.16
PDZRN3-210ENST00000492909 CCDC197Q8NCU1 140 aa14.06□□□□□ -0.16
PDZRN3-210ENST00000492909 C2CD4AQ8NCU7 369 aaPredicted RBP14.06□□□□□ -0.16
PDZRN3-210ENST00000492909 MZB1Q8WU39 189 aa14.06□□□□□ -0.16
PDZRN3-210ENST00000492909 PCDH12Q9NPG4 1184 aa14.06□□□□□ -0.16
PDZRN3-210ENST00000492909 DYRK4Q9NR20 520 aa14.06□□□□□ -0.16
PDZRN3-210ENST00000492909 FKBPLQ9UIM3 349 aa14.06□□□□□ -0.16
PDZRN3-210ENST00000492909 OR51F1A6NGY5 319 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms