RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 DKK1O94907 266 aa10.64□□□□□ -0.71
CDC42SE1-206ENST00000492796 RASGRP1O95267 797 aa10.64□□□□□ -0.71
CDC42SE1-206ENST00000492796 EPOP01588 193 aa10.64□□□□□ -0.71
CDC42SE1-206ENST00000492796 CDK4P11802 303 aa10.64□□□□□ -0.71
CDC42SE1-206ENST00000492796 HK3P52790 923 aa10.64□□□□□ -0.71
CDC42SE1-206ENST00000492796 SHC2P98077 582 aa10.64□□□□□ -0.71
CDC42SE1-206ENST00000492796 PTSQ03393 145 aa10.64□□□□□ -0.71
CDC42SE1-206ENST00000492796 FOXC1Q12948 553 aa10.64□□□□□ -0.71
CDC42SE1-206ENST00000492796 PTPRRQ15256 657 aa10.64□□□□□ -0.71
CDC42SE1-206ENST00000492796 RPS6KA1Q15418 735 aa10.64□□□□□ -0.71
CDC42SE1-206ENST00000492796 CDKN3Q16667 212 aa10.64□□□□□ -0.71
CDC42SE1-206ENST00000492796 ZNF542PQ5EBM4 170 aa10.64□□□□□ -0.71
CDC42SE1-206ENST00000492796 RAET1GQ6H3X3 334 aa10.64□□□□□ -0.71
CDC42SE1-206ENST00000492796 DARS2Q6PI48 645 aaKnown RBP10.64□□□□□ -0.71
CDC42SE1-206ENST00000492796 ENPP7Q6UWV6 458 aa10.64□□□□□ -0.71
CDC42SE1-206ENST00000492796 Q6ZVL8 140 aa10.64□□□□□ -0.71
CDC42SE1-206ENST00000492796 SDR16C5Q8N3Y7 309 aa10.64□□□□□ -0.71
CDC42SE1-206ENST00000492796 FSTL5Q8N475 847 aaPredicted RBP10.64□□□□□ -0.71
CDC42SE1-206ENST00000492796 OR56A4Q8NGH8 313 aa10.64□□□□□ -0.71
CDC42SE1-206ENST00000492796 CCHCR1Q8TD31 782 aa10.64□□□□□ -0.71
CDC42SE1-206ENST00000492796 ADAMTS14Q8WXS8 1223 aa10.64□□□□□ -0.71
CDC42SE1-206ENST00000492796 FUBP1Q96AE4 644 aaKnown RBP10.64□□□□□ -0.71
CDC42SE1-206ENST00000492796 AP2M1Q96CW1 435 aa10.64□□□□□ -0.71
CDC42SE1-206ENST00000492796 LRRC61Q9BV99 259 aa10.64□□□□□ -0.71
CDC42SE1-206ENST00000492796 TEX101Q9BY14 249 aa10.64□□□□□ -0.71
CDC42SE1-206ENST00000492796 FRMD8P1Q9BZ68 369 aaPredicted RBP10.64□□□□□ -0.71
CDC42SE1-206ENST00000492796 USP29Q9HBJ7 922 aa10.64□□□□□ -0.71
CDC42SE1-206ENST00000492796 MAGEE1Q9HCI5 957 aa10.64□□□□□ -0.71
CDC42SE1-206ENST00000492796 PHPT1Q9NRX4 125 aaPredicted RBP10.64□□□□□ -0.71
CDC42SE1-206ENST00000492796 EVA1BQ9NVM1 165 aa10.64□□□□□ -0.71
CDC42SE1-206ENST00000492796 UCKL1Q9NWZ5 548 aa10.64□□□□□ -0.71
CDC42SE1-206ENST00000492796 TOR4AQ9NXH8 423 aa10.64□□□□□ -0.71
CDC42SE1-206ENST00000492796 KLQ9UEF7 1012 aa10.64□□□□□ -0.71
CDC42SE1-206ENST00000492796 RSPH14Q9UHP6 348 aa10.64□□□□□ -0.71
CDC42SE1-206ENST00000492796 KLF15Q9UIH9 416 aa10.64□□□□□ -0.71
CDC42SE1-206ENST00000492796 ANGPTL2Q9UKU9 493 aa10.64□□□□□ -0.71
CDC42SE1-206ENST00000492796 PCDHGA1Q9Y5H4 931 aa10.64□□□□□ -0.71
CDC42SE1-206ENST00000492796 DGKBQ9Y6T7 804 aa10.64□□□□□ -0.71
CDC42SE1-206ENST00000492796 CABIN1Q9Y6J0 2220 aa10.64□□□□□ -0.71
CDC42SE1-206ENST00000492796 KNL1Q8NG31 2342 aa10.63□□□□□ -0.71
CDC42SE1-206ENST00000492796 SCN8AQ9UQD0 1980 aa10.63□□□□□ -0.71
CDC42SE1-206ENST00000492796 LOC285095A0A1B0GVY8 99 aa10.63□□□□□ -0.71
CDC42SE1-206ENST00000492796 K7ESM1 405 aa10.63□□□□□ -0.71
CDC42SE1-206ENST00000492796 FFAR2O15552 330 aa10.63□□□□□ -0.71
CDC42SE1-206ENST00000492796 ANXA9O76027 345 aa10.63□□□□□ -0.71
CDC42SE1-206ENST00000492796 CLDN7O95471 211 aa10.63□□□□□ -0.71
CDC42SE1-206ENST00000492796 GIMD1P0DJR0 217 aa10.63□□□□□ -0.71
CDC42SE1-206ENST00000492796 HLA-DPA1P20036 260 aa10.63□□□□□ -0.71
CDC42SE1-206ENST00000492796 GPR1P46091 355 aa10.63□□□□□ -0.71
CDC42SE1-206ENST00000492796 GEMP55040 296 aa10.63□□□□□ -0.71
CDC42SE1-206ENST00000492796 WNT3AP56704 352 aa10.63□□□□□ -0.71
CDC42SE1-206ENST00000492796 SRP54P61011 504 aaKnown RBP10.63□□□□□ -0.71
CDC42SE1-206ENST00000492796 CDK3Q00526 305 aa10.63□□□□□ -0.71
CDC42SE1-206ENST00000492796 ILKQ13418 452 aa10.63□□□□□ -0.71
CDC42SE1-206ENST00000492796 PRPSAP1Q14558 356 aa10.63□□□□□ -0.71
CDC42SE1-206ENST00000492796 ALG11Q2TAA5 492 aa10.63□□□□□ -0.71
CDC42SE1-206ENST00000492796 PROX2Q3B8N5 592 aa10.63□□□□□ -0.71
CDC42SE1-206ENST00000492796 ANKRD20A2Q5SQ80 823 aa10.63□□□□□ -0.71
CDC42SE1-206ENST00000492796 FAXCQ5TGI0 409 aa10.63□□□□□ -0.71
CDC42SE1-206ENST00000492796 ANKRD20A1Q5TYW2 823 aa10.63□□□□□ -0.71
CDC42SE1-206ENST00000492796 ANKRD20A3Q5VUR7 823 aa10.63□□□□□ -0.71
CDC42SE1-206ENST00000492796 ZCCHC8Q6NZY4 707 aaKnown RBP10.63□□□□□ -0.71
CDC42SE1-206ENST00000492796 KDELC1Q6UW63 502 aa10.63□□□□□ -0.71
CDC42SE1-206ENST00000492796 ADAMTSL4Q6UY14 1074 aa10.63□□□□□ -0.71
CDC42SE1-206ENST00000492796 RAB44Q7Z6P3 723 aaPredicted RBP10.63□□□□□ -0.71
CDC42SE1-206ENST00000492796 HEATR4Q86WZ0 1026 aa10.63□□□□□ -0.71
CDC42SE1-206ENST00000492796 RBFAQ8N0V3 343 aa10.63□□□□□ -0.71
CDC42SE1-206ENST00000492796 FAM181AQ8N9Y4 354 aa10.63□□□□□ -0.71
CDC42SE1-206ENST00000492796 LMX1AQ8TE12 382 aa10.63□□□□□ -0.71
CDC42SE1-206ENST00000492796 OXNAD1Q96HP4 312 aaPredicted RBP10.63□□□□□ -0.71
CDC42SE1-206ENST00000492796 MRGPRX2Q96LB1 330 aa10.63□□□□□ -0.71
CDC42SE1-206ENST00000492796 SPATA13Q96N96 652 aa10.63□□□□□ -0.71
CDC42SE1-206ENST00000492796 SMIM14Q96QK8 99 aa10.63□□□□□ -0.71
CDC42SE1-206ENST00000492796 FSD1LQ9BXM9 530 aa10.63□□□□□ -0.71
CDC42SE1-206ENST00000492796 CDH19Q9H159 772 aa10.63□□□□□ -0.71
CDC42SE1-206ENST00000492796 ABCG8Q9H221 673 aa10.63□□□□□ -0.71
CDC42SE1-206ENST00000492796 TRABDQ9H4I3 376 aa10.63□□□□□ -0.71
CDC42SE1-206ENST00000492796 ZFYVE1Q9HBF4 777 aa10.63□□□□□ -0.71
CDC42SE1-206ENST00000492796 RAD18Q9NS91 495 aa10.63□□□□□ -0.71
CDC42SE1-206ENST00000492796 UBP1Q9NZI7 540 aa10.63□□□□□ -0.71
CDC42SE1-206ENST00000492796 NCKIPSDQ9NZQ3 722 aa10.63□□□□□ -0.71
CDC42SE1-206ENST00000492796 NFKBIL1Q9UBC1 381 aaPredicted RBP10.63□□□□□ -0.71
CDC42SE1-206ENST00000492796 PNMA8BQ9ULN7 279 aaPredicted RBP10.63□□□□□ -0.71
CDC42SE1-206ENST00000492796 AAR2Q9Y312 384 aaKnown RBP10.63□□□□□ -0.71
CDC42SE1-206ENST00000492796 ZNF711Q9Y462 761 aa10.63□□□□□ -0.71
CDC42SE1-206ENST00000492796 TDRD6O60522 2096 aaKnown RBP10.62□□□□□ -0.71
CDC42SE1-206ENST00000492796 GOLGA6CA6NDK9 693 aa10.62□□□□□ -0.71
CDC42SE1-206ENST00000492796 GOLGA6BA6NDN3 693 aa10.62□□□□□ -0.71
CDC42SE1-206ENST00000492796 C5orf60A6NFR6 353 aa10.62□□□□□ -0.71
CDC42SE1-206ENST00000492796 TMEM202A6NGA9 273 aa10.62□□□□□ -0.71
CDC42SE1-206ENST00000492796 GOLGA8CPA6NN73 597 aa10.62□□□□□ -0.71
CDC42SE1-206ENST00000492796 LMO7DNF2Z398 122 aa10.62□□□□□ -0.71
CDC42SE1-206ENST00000492796 TRIM38O00635 465 aa10.62□□□□□ -0.71
CDC42SE1-206ENST00000492796 ZSCAN12O43309 604 aa10.62□□□□□ -0.71
CDC42SE1-206ENST00000492796 SIGLEC6O43699 453 aa10.62□□□□□ -0.71
CDC42SE1-206ENST00000492796 RFPL3O75679 317 aa10.62□□□□□ -0.71
CDC42SE1-206ENST00000492796 SOD1P00441 154 aa10.62□□□□□ -0.71
CDC42SE1-206ENST00000492796 TNFP01375 233 aa10.62□□□□□ -0.71
CDC42SE1-206ENST00000492796 FGF1P05230 155 aa10.62□□□□□ -0.71
CDC42SE1-206ENST00000492796 ATXN1LP0C7T5 689 aaKnown RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms