RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 HES6Q96HZ4 224 aa12.71□□□□□ -0.37
SEC61A1-206ENST00000491668 MCCC1Q96RQ3 725 aaPredicted RBP12.71□□□□□ -0.37
SEC61A1-206ENST00000491668 IL12RB2Q99665 862 aa12.71□□□□□ -0.37
SEC61A1-206ENST00000491668 ZNF670Q9BS34 389 aa12.71□□□□□ -0.37
SEC61A1-206ENST00000491668 SLC13A1Q9BZW2 595 aa12.71□□□□□ -0.37
SEC61A1-206ENST00000491668 NT5MQ9NPB1 228 aa12.71□□□□□ -0.37
SEC61A1-206ENST00000491668 SCUBE2Q9NQ36 999 aa12.71□□□□□ -0.37
SEC61A1-206ENST00000491668 MRPL40Q9NQ50 206 aaKnown RBP12.71□□□□□ -0.37
SEC61A1-206ENST00000491668 JRKLQ9Y4A0 524 aa12.71□□□□□ -0.37
SEC61A1-206ENST00000491668 PTPRQQ9UMZ3 2332 aa12.71□□□□□ -0.38
SEC61A1-206ENST00000491668 C3orf70A6NLC5 250 aaPredicted RBP12.7□□□□□ -0.38
SEC61A1-206ENST00000491668 BRINP1O60477 761 aa12.7□□□□□ -0.38
SEC61A1-206ENST00000491668 CPP00450 1065 aa12.7□□□□□ -0.38
SEC61A1-206ENST00000491668 FUCA1P04066 466 aa12.7□□□□□ -0.38
SEC61A1-206ENST00000491668 HOXB3P14651 431 aaPredicted RBP12.7□□□□□ -0.38
SEC61A1-206ENST00000491668 SERPINB6P35237 376 aa12.7□□□□□ -0.38
SEC61A1-206ENST00000491668 KIAA1024LP59773 190 aa12.7□□□□□ -0.38
SEC61A1-206ENST00000491668 NR0B2Q15466 257 aa12.7□□□□□ -0.38
SEC61A1-206ENST00000491668 TFDP3Q5H9I0 405 aa12.7□□□□□ -0.38
SEC61A1-206ENST00000491668 SEL1L2Q5TEA6 688 aa12.7□□□□□ -0.38
SEC61A1-206ENST00000491668 KAZNQ674X7 775 aa12.7□□□□□ -0.38
SEC61A1-206ENST00000491668 ALG1LQ6GMV1 187 aa12.7□□□□□ -0.38
SEC61A1-206ENST00000491668 ESRP1Q6NXG1 681 aaKnown RBP12.7□□□□□ -0.38
SEC61A1-206ENST00000491668 PNCKQ6P2M8 343 aa12.7□□□□□ -0.38
SEC61A1-206ENST00000491668 SPOCD1Q6ZMY3 1216 aa12.7□□□□□ -0.38
SEC61A1-206ENST00000491668 LRRC49Q8IUZ0 686 aa12.7□□□□□ -0.38
SEC61A1-206ENST00000491668 KYQ8NBH2 561 aa12.7□□□□□ -0.38
SEC61A1-206ENST00000491668 ARRDC2Q8TBH0 407 aa12.7□□□□□ -0.38
SEC61A1-206ENST00000491668 PDCD6IPQ8WUM4 868 aaKnown RBP12.7□□□□□ -0.38
SEC61A1-206ENST00000491668 PTCD2Q8WV60 388 aaKnown RBP12.7□□□□□ -0.38
SEC61A1-206ENST00000491668 FATE1Q969F0 183 aa12.7□□□□□ -0.38
SEC61A1-206ENST00000491668 WDR92Q96MX6 357 aa12.7□□□□□ -0.38
SEC61A1-206ENST00000491668 TSGA13Q96PP4 275 aa12.7□□□□□ -0.38
SEC61A1-206ENST00000491668 RBM15Q96T37 977 aaKnown RBP eCLIP12.7□□□□□ -0.38
SEC61A1-206ENST00000491668 SEMA3CQ99985 751 aa12.7□□□□□ -0.38
SEC61A1-206ENST00000491668 RABGEF1Q9UJ41 708 aa12.7□□□□□ -0.38
SEC61A1-206ENST00000491668 PPIL1Q9Y3C6 166 aa12.7□□□□□ -0.38
SEC61A1-206ENST00000491668 RAI2Q9Y5P3 530 aa12.7□□□□□ -0.38
SEC61A1-206ENST00000491668 DGKBQ9Y6T7 804 aa12.7□□□□□ -0.38
SEC61A1-206ENST00000491668 ATMQ13315 3056 aa12.7□□□□□ -0.38
SEC61A1-206ENST00000491668 PMS2P1A4D2B8 440 aa12.69□□□□□ -0.38
SEC61A1-206ENST00000491668 CTAGE9A4FU28 777 aa12.69□□□□□ -0.38
SEC61A1-206ENST00000491668 APOL1O14791 398 aa12.69□□□□□ -0.38
SEC61A1-206ENST00000491668 MATN3O15232 486 aa12.69□□□□□ -0.38
SEC61A1-206ENST00000491668 CSO75390 466 aaKnown RBP12.69□□□□□ -0.38
SEC61A1-206ENST00000491668 RASGRP1O95267 797 aa12.69□□□□□ -0.38
SEC61A1-206ENST00000491668 PRLP01236 227 aa12.69□□□□□ -0.38
SEC61A1-206ENST00000491668 ANXA6P08133 673 aa12.69□□□□□ -0.38
SEC61A1-206ENST00000491668 HOXC4P09017 264 aaPredicted RBP12.69□□□□□ -0.38
SEC61A1-206ENST00000491668 ALPIP09923 528 aa12.69□□□□□ -0.38
SEC61A1-206ENST00000491668 ZFXP17010 805 aaPredicted RBP12.69□□□□□ -0.38
SEC61A1-206ENST00000491668 CTPS1P17812 591 aa12.69□□□□□ -0.38
SEC61A1-206ENST00000491668 ITPKBP27987 946 aa12.69□□□□□ -0.38
SEC61A1-206ENST00000491668 HTR1BP28222 390 aa12.69□□□□□ -0.38
SEC61A1-206ENST00000491668 VIPR1P32241 457 aa12.69□□□□□ -0.38
SEC61A1-206ENST00000491668 ETV3P41162 512 aa12.69□□□□□ -0.38
SEC61A1-206ENST00000491668 DUSP3P51452 185 aaPredicted RBP12.69□□□□□ -0.38
SEC61A1-206ENST00000491668 PDX1P52945 283 aa12.69□□□□□ -0.38
SEC61A1-206ENST00000491668 COPS2P61201 443 aa12.69□□□□□ -0.38
SEC61A1-206ENST00000491668 DYNLT1P63172 113 aa12.69□□□□□ -0.38
SEC61A1-206ENST00000491668 DSC2Q02487 901 aa12.69□□□□□ -0.38
SEC61A1-206ENST00000491668 NIPAL4Q0D2K0 466 aa12.69□□□□□ -0.38
SEC61A1-206ENST00000491668 TFDP2Q14188 446 aa12.69□□□□□ -0.38
SEC61A1-206ENST00000491668 ACOX1Q15067 660 aa12.69□□□□□ -0.38
SEC61A1-206ENST00000491668 LLGL1Q15334 1064 aa12.69□□□□□ -0.38
SEC61A1-206ENST00000491668 ISXQ2M1V0 245 aa12.69□□□□□ -0.38
SEC61A1-206ENST00000491668 RALGPS1Q5JS13 557 aa12.69□□□□□ -0.38
SEC61A1-206ENST00000491668 MFSD7Q6UXD7 560 aa12.69□□□□□ -0.38
SEC61A1-206ENST00000491668 Q6ZVL8 140 aa12.69□□□□□ -0.38
SEC61A1-206ENST00000491668 TECPR1Q7Z6L1 1165 aa12.69□□□□□ -0.38
SEC61A1-206ENST00000491668 VSIG1Q86XK7 387 aa12.69□□□□□ -0.38
SEC61A1-206ENST00000491668 FSTL5Q8N475 847 aaPredicted RBP12.69□□□□□ -0.38
SEC61A1-206ENST00000491668 PLD5Q8N7P1 536 aa12.69□□□□□ -0.38
SEC61A1-206ENST00000491668 MAPK15Q8TD08 544 aa12.69□□□□□ -0.38
SEC61A1-206ENST00000491668 ALG3Q92685 438 aa12.69□□□□□ -0.38
SEC61A1-206ENST00000491668 DTD2Q96FN9 168 aa12.69□□□□□ -0.38
SEC61A1-206ENST00000491668 SCRN2Q96FV2 425 aa12.69□□□□□ -0.38
SEC61A1-206ENST00000491668 RNF157Q96PX1 679 aa12.69□□□□□ -0.38
SEC61A1-206ENST00000491668 DTLQ9NZJ0 730 aa12.69□□□□□ -0.38
SEC61A1-206ENST00000491668 NCKIPSDQ9NZQ3 722 aa12.69□□□□□ -0.38
SEC61A1-206ENST00000491668 SIRPGQ9P1W8 387 aa12.69□□□□□ -0.38
SEC61A1-206ENST00000491668 KLQ9UEF7 1012 aa12.69□□□□□ -0.38
SEC61A1-206ENST00000491668 PHTF1Q9UMS5 762 aa12.69□□□□□ -0.38
SEC61A1-206ENST00000491668 ST14Q9Y5Y6 855 aa12.69□□□□□ -0.38
SEC61A1-206ENST00000491668 AK5Q9Y6K8 562 aa12.69□□□□□ -0.38
SEC61A1-206ENST00000491668 KIF26BQ2KJY2 2108 aa12.68□□□□□ -0.38
SEC61A1-206ENST00000491668 ZNF487B1APH4 448 aa12.68□□□□□ -0.38
SEC61A1-206ENST00000491668 DDX3YO15523 660 aaKnown RBP12.68□□□□□ -0.38
SEC61A1-206ENST00000491668 SOD1P00441 154 aa12.68□□□□□ -0.38
SEC61A1-206ENST00000491668 MPOP05164 745 aa12.68□□□□□ -0.38
SEC61A1-206ENST00000491668 HLA-DQB2P05538 268 aa12.68□□□□□ -0.38
SEC61A1-206ENST00000491668 PYGMP11217 842 aa12.68□□□□□ -0.38
SEC61A1-206ENST00000491668 KRT10P13645 584 aa12.68□□□□□ -0.38
SEC61A1-206ENST00000491668 CCNCP24863 283 aa12.68□□□□□ -0.38
SEC61A1-206ENST00000491668 CASQ1P31415 396 aa12.68□□□□□ -0.38
SEC61A1-206ENST00000491668 EIF2S3P41091 472 aaKnown RBP12.68□□□□□ -0.38
SEC61A1-206ENST00000491668 CDKN2BP42772 138 aa12.68□□□□□ -0.38
SEC61A1-206ENST00000491668 BLKP51451 505 aa12.68□□□□□ -0.38
SEC61A1-206ENST00000491668 ARMC12Q5T9G4 340 aa12.68□□□□□ -0.38
SEC61A1-206ENST00000491668 DENND2CQ68D51 928 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms